CC1G_04059
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_04059 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8NVS8 | Functional description | Glycosyl hydrolase family 5 protein/cellulase |
| Location | Chr_4:3233657..3235118 | Strand | + |
| Gene length (nt) | 1462 | Transcript length (nt) | 1359 |
| CDS length (nt) | 1359 | Protein length (aa) | 452 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| Aspergillus nidulans | AN9166 |
| Neurospora crassa | NCU05882 |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Auricularia subglabra | Aurde3_1_1186235 | 68 | 7.897E-191 | 593 |
| Agrocybe aegerita | Agrae_CAA7257417 | 57.9 | 2.717E-153 | 484 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 3537 |
| Description | Glycosyl hydrolase family 5 protein/cellulase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00150 | Cellulase (glycosyl hydrolase family 5) | IPR001547 | 108 | 407 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR017853 | Glycoside hydrolase superfamily |
| IPR001547 | Glycoside hydrolase, family 5 |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
| GO:0071704 | organic substance metabolic process | BP |
KEGG
| KEGG Orthology |
|---|
| K01179 |
EggNOG
| COG category | Description |
|---|---|
| G | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| GH | GH5 | GH5_11 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_04059 across fungi.
Arrow shows the origin of gene family containing CC1G_04059.
Protein
| Sequence id | 3537 |
|---|---|
| Sequence |
>3537 MSSARRPDAVTTTCFATPVLEDTRALEHDNSTLRCRRAASSPIRRRNIHSNTLHIPLAASLFPTHINAVVLRSSG RWILDASTGQRVKLRCVNWAGHMETNIPEGLQHQPASTIAQWIATNRFNCVRLTFSIDMALNPNQRVSDSFTAAA GPAGVSVSEMQGLYNQALSKNPWLSSSTTRGAFARVIQELEARNVLVVLDNHVSRASWCCSTNDGNGWWASASGY DANNSRYFDTNNWLNGLRSMASFSHSHPNVVGIALRNELRAVGNQDRNNHADWYNYITQGAQAVRGANSNLLVVV GGVNYALDLSFVWNRMLDRNVFGDKLVWELHNYAWSGGGRDCNNHQKMMGDRGGFVLIQNREFTGPLFLSEFGWA QNNPSADEIAYSSCLVRYLESNDAEWAYWALQGSYYVRERRVNFDETFGLLNHDWSGWRNGSFVRTLGKMWDVTQ GP |
| Length | 452 |
Coding
| Sequence id | CC1G_04059T0 |
|---|---|
| Sequence |
>CC1G_04059T0 ATGTCTTCCGCTCGCCGTCCGGACGCTGTTACCACGACCTGCTTCGCGACGCCTGTCTTGGAGGACACGAGAGCT CTCGAACACGACAATTCGACGCTTCGCTGTCGGCGGGCCGCCAGTTCGCCTATACGCCGGCGAAACATTCACTCA AATACGCTGCACATCCCCTTGGCTGCCTCTCTGTTCCCGACACACATCAACGCCGTCGTCCTGCGCAGCTCAGGA CGATGGATCCTCGACGCCTCCACCGGCCAACGGGTCAAACTCCGCTGCGTCAATTGGGCAGGGCACATGGAAACC AACATCCCTGAAGGCCTCCAGCACCAACCAGCCAGCACCATCGCCCAATGGATCGCCACCAACCGCTTCAACTGC GTTCGCCTCACCTTCTCCATCGACATGGCGCTCAACCCCAACCAACGTGTGTCCGACTCGTTCACCGCAGCAGCC GGACCAGCCGGCGTGAGCGTCTCTGAGATGCAGGGTTTGTACAACCAAGCACTCTCCAAGAACCCCTGGTTATCT TCGTCCACGACGAGAGGGGCCTTCGCACGCGTCATCCAAGAACTCGAAGCGCGCAATGTTCTCGTCGTGCTCGAC AACCACGTCTCCCGCGCCTCCTGGTGCTGCAGCACCAACGACGGGAACGGGTGGTGGGCCTCCGCCTCGGGCTAC GACGCCAACAACAGCCGGTATTTCGACACCAACAACTGGCTCAACGGCCTGCGGAGCATGGCGTCGTTCTCCCAC TCCCACCCGAACGTCGTCGGCATCGCCCTCCGCAACGAACTCCGCGCTGTAGGGAACCAGGATAGGAACAACCAC GCCGATTGGTACAATTATATCACCCAGGGGGCGCAGGCCGTGCGCGGTGCGAACTCGAACCTCCTCGTCGTGGTC GGCGGCGTGAACTACGCGCTGGACCTAAGCTTCGTCTGGAACCGCATGCTCGACCGCAACGTGTTCGGCGACAAG CTGGTGTGGGAGCTACACAACTATGCATGGAGTGGCGGAGGACGGGATTGTAATAACCACCAGAAGATGATGGGT GATCGGGGCGGATTTGTTCTGATTCAGAACAGGGAGTTCACGGGACCGCTGTTTTTGAGCGAGTTTGGGTGGGCG CAGAATAATCCTTCGGCGGATGAGATCGCTTATTCCTCGTGCCTTGTGCGGTACCTCGAGAGTAACGATGCGGAG TGGGCGTATTGGGCGTTGCAGGGGTCGTATTATGTGCGGGAGAGGAGAGTTAACTTTGACGAGACGTTCGGTCTT CTCAATCACGATTGGAGCGGATGGAGGAATGGGAGTTTCGTGCGAACTCTGGGGAAGATGTGGGATGTTACTCAA GGTCCT |
| Length | 1359 |
Transcript
| Sequence id | CC1G_04059T0 |
|---|---|
| Sequence |
>CC1G_04059T0 ATGTCTTCCGCTCGCCGTCCGGACGCTGTTACCACGACCTGCTTCGCGACGCCTGTCTTGGAGGACACGAGAGCT CTCGAACACGACAATTCGACGCTTCGCTGTCGGCGGGCCGCCAGTTCGCCTATACGCCGGCGAAACATTCACTCA AATACGCTGCACATCCCCTTGGCTGCCTCTCTGTTCCCGACACACATCAACGCCGTCGTCCTGCGCAGCTCAGGA CGATGGATCCTCGACGCCTCCACCGGCCAACGGGTCAAACTCCGCTGCGTCAATTGGGCAGGGCACATGGAAACC AACATCCCTGAAGGCCTCCAGCACCAACCAGCCAGCACCATCGCCCAATGGATCGCCACCAACCGCTTCAACTGC GTTCGCCTCACCTTCTCCATCGACATGGCGCTCAACCCCAACCAACGTGTGTCCGACTCGTTCACCGCAGCAGCC GGACCAGCCGGCGTGAGCGTCTCTGAGATGCAGGGTTTGTACAACCAAGCACTCTCCAAGAACCCCTGGTTATCT TCGTCCACGACGAGAGGGGCCTTCGCACGCGTCATCCAAGAACTCGAAGCGCGCAATGTTCTCGTCGTGCTCGAC AACCACGTCTCCCGCGCCTCCTGGTGCTGCAGCACCAACGACGGGAACGGGTGGTGGGCCTCCGCCTCGGGCTAC GACGCCAACAACAGCCGGTATTTCGACACCAACAACTGGCTCAACGGCCTGCGGAGCATGGCGTCGTTCTCCCAC TCCCACCCGAACGTCGTCGGCATCGCCCTCCGCAACGAACTCCGCGCTGTAGGGAACCAGGATAGGAACAACCAC GCCGATTGGTACAATTATATCACCCAGGGGGCGCAGGCCGTGCGCGGTGCGAACTCGAACCTCCTCGTCGTGGTC GGCGGCGTGAACTACGCGCTGGACCTAAGCTTCGTCTGGAACCGCATGCTCGACCGCAACGTGTTCGGCGACAAG CTGGTGTGGGAGCTACACAACTATGCATGGAGTGGCGGAGGACGGGATTGTAATAACCACCAGAAGATGATGGGT GATCGGGGCGGATTTGTTCTGATTCAGAACAGGGAGTTCACGGGACCGCTGTTTTTGAGCGAGTTTGGGTGGGCG CAGAATAATCCTTCGGCGGATGAGATCGCTTATTCCTCGTGCCTTGTGCGGTACCTCGAGAGTAACGATGCGGAG TGGGCGTATTGGGCGTTGCAGGGGTCGTATTATGTGCGGGAGAGGAGAGTTAACTTTGACGAGACGTTCGGTCTT CTCAATCACGATTGGAGCGGATGGAGGAATGGGAGTTTCGTGCGAACTCTGGGGAAGATGTGGGATGTTACTCAA GGTCCTTAG |
| Length | 1359 |
Gene
| Sequence id | CC1G_04059T0 |
|---|---|
| Sequence |
>CC1G_04059T0 ATGTCTTCCGCTCGCCGTCCGGACGCTGTTACCACGACCTGCTTCGCGACGCCGTGACGGTCCCATATGACCTTC TCTTCTCAGTGTCTTGGAGGACACGAGAGCTCTCGAACACGACAATTCGACGCTTCGCTGTCGGCGGGCCGCCAG TTCGCCTATACGCCGGCGAAACATTCACTCAAATACGCTGCACATCCCCTTGGCTGCCTCTCTGTTCCCGACACA CAGTTCGTTGTCAGCCCATACTGGGCAGGCTAAGATGCTCTCCTATTTAATCTTACTTCTCTTCCTCCACACAGT CAACGCCGTCGTCCTGCGCAGCTCAGGACGATGGATCCTCGACGCCTCCACCGGCCAACGGGTCAAACTCCGCTG CGTCAATTGGGCAGGGCACATGGAAACCAACATCCCTGAAGGCCTCCAGCACCAACCAGCCAGCACCATCGCCCA ATGGATCGCCACCAACCGCTTCAACTGCGTTCGCCTCACCTTCTCCATCGACATGGCGCTCAACCCCAACCAACG TGTGTCCGACTCGTTCACCGCAGCAGCCGGACCAGCCGGCGTGAGCGTCTCTGAGATGCAGGGTTTGTACAACCA AGCACTCTCCAAGAACCCCTGGTTATCTTCGTCCACGACGAGAGGGGCCTTCGCACGCGTCATCCAAGAACTCGA AGCGCGCAATGTTCTCGTCGTGCTCGACAACCACGTCTCCCGCGCCTCCTGGTGCTGCAGCACCAACGACGGGAA CGGGTGGTGGGCCTCCGCCTCGGGCTACGACGCCAACAACAGCCGGTATTTCGACACCAACAACTGGCTCAACGG CCTGCGGAGCATGGCGTCGTTCTCCCACTCCCACCCGAACGTCGTCGGCATCGCCCTCCGCAACGAACTCCGCGC TGTAGGGAACCAGGATAGGAACAACCACGCCGATTGGTACAATTATATCACCCAGGGGGCGCAGGCCGTGCGCGG TGCGAACTCGAACCTCCTCGTCGTGGTCGGCGGCGTGAACTACGCGCTGGACCTAAGCTTCGTCTGGAACCGCAT GCTCGACCGCAACGTGTTCGGCGACAAGCTGGTGTGGGAGCTACACAACTATGCATGGAGTGGCGGAGGACGGGA TTGTAATAACCACCAGAAGATGATGGGTGATCGGGGCGGATTTGTTCTGATTCAGAACAGGGAGTTCACGGGACC GCTGTTTTTGAGCGAGTTTGGGTGGGCGCAGAATAATCCTTCGGCGGATGAGATCGCTTATTCCTCGTGCCTTGT GCGGTACCTCGAGAGTAACGATGCGGAGTGGGCGTATTGGGCGTTGCAGGGGTCGTATTATGTGCGGGAGAGGAG AGTTAACTTTGACGAGACGTTCGGTCTTCTCAATCACGATTGGAGCGGATGGAGGAATGGGAGTTTCGTGCGAAC TCTGGGGAAGATGTGGGATGTTACTCAAGGTCCTTAG |
| Length | 1462 |