CC1G_06564
Coprinopsis cinerea Okoyama 7

General data

Systematic name CC1G_06564 Strain Coprinopsis cinerea A43mutB43mut pab1-1 #326
Standard name - Synonyms
Uniprot id A8N2Z2 Functional description Exo-beta-1,3-glucanase
Location Chr_1:2839061..2840817 Strand -
Gene length (nt) 1757 Transcript length (nt) 1266
CDS length (nt) 1266 Protein length (aa) 421

Reciprocal best hits in model fungi

Strain name Gene / Protein name
No records

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Flammulina velutipes Flave_chr08AA00467 67.7 1.247E-198 616
Lentinula edodes NBRC 111202 Lenedo1_1176007 65.4 6.653E-198 614
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_196962 67.2 2.425E-197 612
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_51741 67.2 2.527E-197 612
Lentinula edodes W1-26 v1.0 Lentinedodes1_21901 65.5 3.252E-197 612
Ganoderma sp. 10597 SS1 v1.0 Gansp1_125441 63.7 3.595E-195 606
Lentinula edodes B17 Lened_B_1_1_11453 65.3 1.668E-193 601
Grifola frondosa Grifr_OBZ79265 59.5 1.241E-180 564
Auricularia subglabra Aurde3_1_1024338 58.1 1.993E-172 541

Expression

Name Summary Attribution Assay type
Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea Plaza et al. 2016 RNA-seq
Sample Mean cpm SD cpm Se of mean
O7 + PBS 239.088 107.6443 62.1485
O7 + A. avenae 211.0917 21.3604 12.3324
O7 + C. elegans 213.3264 87.9844 50.7978
O7 + mechanical damage 246.958 118.1822 68.2325
O7 + E. coli 105.2374 19.3345 11.1628
O7 + B. subtilis 189.5791 81.5724 47.0959

General data

Systematic name -
Protein id 5648
Description Exo-beta-1,3-glucanase

Annotation summary

0 100 200 300 400 421

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
Pfam PF00150 Cellulase (glycosyl hydrolase family 5) IPR001547 85 210

SignalP

Prediction Start End Score
SP(Sec/SPI) 1 23 0.9722

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR001547 Glycoside hydrolase, family 5
IPR017853 Glycoside hydrolase superfamily

GO

Go id Term Ontology
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0071704 organic substance metabolic process BP

KEGG

KEGG Orthology
K01210

EggNOG

COG category Description
G Belongs to the glycosyl hydrolase 5 (cellulase A) family

CAZy

Class Family Subfamily
GH GH5 GH5_9

Transcription factor

Group
No records

Conservation of CC1G_06564 across fungi.

Arrow shows the origin of gene family containing CC1G_06564.

Protein

Sequence id 5648
Sequence >5648
MRPSLSKLLLACLTSFGVASVSAQRWGFPYGEQKLRGVNLGGWLVTEPWITPSLFDNTGDPRVIDEWTFGQYLDR
GRAQAILRNHWDTFITEADFAEIAGAGLNHVRLPIGYWAFEVGPGEPYISGQLPYLQRAIGWAEKYGLKVIIDLH
GAPGSQNGFDNSGQKMDYPTWHTKQSNVDRTNAVIKRIADMFKDSTAVVPMIAPLNEPAGYRGDDVLRVTRQFWY
DSYGNIRYPYGSARQSDTVVMISDAFQPLSYWSGFMAYPGFEGVMIDTHHYQIFNDELNRMSPEQHIQMACSRGR
ELAASHLWIAVGEWSPARTDCARYLNGRGVGSRFEGTYPGSSHIGSCRSFTGPASGYSQSYKNFLRQFWEAQTIA
FERGGDGWIQWTWKAEEAHEWSYQAGLRNGWIPRNPTDRMYPNICG
Length 421

Coding

Sequence id CC1G_06564T0
Sequence >CC1G_06564T0
ATGCGGCCTTCGCTATCGAAACTCCTCCTAGCCTGTCTCACCTCCTTCGGTGTGGCCAGTGTCAGCGCCCAGAGA
TGGGGGTTTCCCTATGGAGAGCAGAAGCTCAGGGGAGTTAACCTTGGTGGCTGGCTCGTGACTGAGCCCTGGATC
ACCCCGTCCCTGTTCGATAACACCGGTGACCCAAGGGTCATCGACGAGTGGACGTTTGGTCAATACCTGGACCGA
GGCCGTGCACAAGCCATTCTTCGCAACCATTGGGACACGTTCATCACCGAAGCCGACTTTGCTGAGATTGCTGGC
GCAGGCCTCAATCATGTTCGTCTCCCCATTGGATACTGGGCCTTCGAAGTTGGCCCAGGAGAGCCATACATTTCA
GGACAGCTTCCTTACCTCCAAAGAGCCATTGGCTGGGCGGAGAAGTACGGTCTCAAGGTCATCATCGATCTCCAT
GGTGCTCCTGGCAGCCAGAATGGCTTCGATAATTCAGGCCAAAAGATGGACTACCCAACCTGGCACACCAAGCAA
TCTAATGTCGATCGCACGAATGCCGTAATCAAGAGAATCGCAGATATGTTCAAGGATTCGACTGCTGTCGTCCCC
ATGATTGCGCCTTTGAACGAACCTGCTGGATATCGTGGAGATGACGTGCTGCGAGTTACCCGTCAGTTCTGGTAC
GACAGCTACGGTAACATTCGCTATCCCTATGGCAGCGCAAGGCAGAGCGACACTGTCGTCATGATCTCCGATGCG
TTCCAGCCTCTGAGCTATTGGAGTGGATTCATGGCTTATCCTGGATTCGAGGGGGTTATGATCGACACTCACCAC
TACCAGATCTTCAATGATGAGCTCAACAGGATGAGTCCTGAACAGCACATTCAAATGGCCTGCAGCAGGGGAAGA
GAACTGGCCGCTTCTCATCTCTGGATTGCCGTTGGCGAATGGTCTCCTGCTCGGACTGACTGTGCCAGGTACCTC
AACGGTCGTGGCGTTGGCAGTCGCTTCGAAGGAACATACCCTGGCTCAAGCCACATCGGCAGCTGCCGCAGTTTC
ACTGGCCCTGCATCCGGATATAGCCAAAGCTACAAGAACTTCTTGCGACAATTCTGGGAGGCTCAGACCATCGCA
TTCGAGAGGGGCGGTGATGGCTGGATTCAGTGGACCTGGAAGGCGGAGGAGGCTCACGAGTGGTCGTATCAGGCT
GGGTTGAGGAACGGATGGATCCCAAGGAACCCGACTGACAGGATGTACCCCAACATCTGCGGC
Length 1266

Transcript

Sequence id CC1G_06564T0
Sequence >CC1G_06564T0
ATGCGGCCTTCGCTATCGAAACTCCTCCTAGCCTGTCTCACCTCCTTCGGTGTGGCCAGTGTCAGCGCCCAGAGA
TGGGGGTTTCCCTATGGAGAGCAGAAGCTCAGGGGAGTTAACCTTGGTGGCTGGCTCGTGACTGAGCCCTGGATC
ACCCCGTCCCTGTTCGATAACACCGGTGACCCAAGGGTCATCGACGAGTGGACGTTTGGTCAATACCTGGACCGA
GGCCGTGCACAAGCCATTCTTCGCAACCATTGGGACACGTTCATCACCGAAGCCGACTTTGCTGAGATTGCTGGC
GCAGGCCTCAATCATGTTCGTCTCCCCATTGGATACTGGGCCTTCGAAGTTGGCCCAGGAGAGCCATACATTTCA
GGACAGCTTCCTTACCTCCAAAGAGCCATTGGCTGGGCGGAGAAGTACGGTCTCAAGGTCATCATCGATCTCCAT
GGTGCTCCTGGCAGCCAGAATGGCTTCGATAATTCAGGCCAAAAGATGGACTACCCAACCTGGCACACCAAGCAA
TCTAATGTCGATCGCACGAATGCCGTAATCAAGAGAATCGCAGATATGTTCAAGGATTCGACTGCTGTCGTCCCC
ATGATTGCGCCTTTGAACGAACCTGCTGGATATCGTGGAGATGACGTGCTGCGAGTTACCCGTCAGTTCTGGTAC
GACAGCTACGGTAACATTCGCTATCCCTATGGCAGCGCAAGGCAGAGCGACACTGTCGTCATGATCTCCGATGCG
TTCCAGCCTCTGAGCTATTGGAGTGGATTCATGGCTTATCCTGGATTCGAGGGGGTTATGATCGACACTCACCAC
TACCAGATCTTCAATGATGAGCTCAACAGGATGAGTCCTGAACAGCACATTCAAATGGCCTGCAGCAGGGGAAGA
GAACTGGCCGCTTCTCATCTCTGGATTGCCGTTGGCGAATGGTCTCCTGCTCGGACTGACTGTGCCAGGTACCTC
AACGGTCGTGGCGTTGGCAGTCGCTTCGAAGGAACATACCCTGGCTCAAGCCACATCGGCAGCTGCCGCAGTTTC
ACTGGCCCTGCATCCGGATATAGCCAAAGCTACAAGAACTTCTTGCGACAATTCTGGGAGGCTCAGACCATCGCA
TTCGAGAGGGGCGGTGATGGCTGGATTCAGTGGACCTGGAAGGCGGAGGAGGCTCACGAGTGGTCGTATCAGGCT
GGGTTGAGGAACGGATGGATCCCAAGGAACCCGACTGACAGGATGTACCCCAACATCTGCGGCTGA
Length 1266

Gene

Sequence id CC1G_06564T0
Sequence >CC1G_06564T0
ATGCGGCCTTCGCTATCGAAACTCCTCCTAGCCTGTCTCACCTCCTTCGGTGTGGCCAGTGTCAGCGCCCAGAGA
TGGGGGTTTCCCTATGGAGAGCAGAAGCTCAGGGGAGTTAACCTTGGTGGCTGGCTCGTGACTGAGGTTAGTCGC
CGCATTCCACAGTGGAATCACAACGCTGACGAGCCTACCTGTTAGCCCTGGATCACCCCGTCCCTGTTCGATAAC
ACCGGTGACCCAAGGGTCATCGACGAGTGGACGTTTGGTCAATACCTGGACCGAGGCCGTGCACAAGCCATTCTT
CGCAACCATTGGGACACGTTCATCACCGAAGCCGACTTTGCTGAGATTGCTGGCGCAGGGTTAGTTCTTCTCTTC
ATGATATCTCCCACGTCGACTCATCGCCGAGGTCTGAACATAGCCTCAATCATGTTCGTCTCCCCATTGGATACT
GGGCCTTCGAAGTTGGCCCAGGAGAGCCATACATTTCAGGACAGCTTCCTTACCTCCAAAGAGCCATTGGCTGGG
CGGAGAAGTACGGTCTCAAGGTCATCATCGATCTCCATGGTGAGCTACATGACGTGTTGAACCGACCGAACATCG
GGGCTGACATCAACTTCTTAGGTGCTCCTGGCAGCCAGAATGGGTAACCTTCTTTCCTTTTTTGAGCATAGGCCC
TCGCTGACGGTCGCTCAAGCTTCGATAATTCAGGCCAAAAGATGGACTACCCGTGAGTTAACTGCAAAGTTCAGA
TGGGGCATGCCTTGATGAAGTATCTCTAGAACCTGGCACACCAAGCAATCTAATGTCGATCGCACGAATGCCGTA
ATCAAGAGAATCGCAGATATGTTCAAGGATTCGACTGCTGTCGTCCCCATGATTGCGCCTTTGAACGAGTGGGTG
ATACATGCTGTTATTCTTTATATTCTCAACTAACCTTTGAATAGACCTGCTGGATATCGTGGAGATGACGTGCTG
CGAGTTACCCGTCAGGTAAAGCTGAATCCTCGGATTAACACGACACACTGGGCTCACCTGTACATCACAGTTCTG
GTACGACAGCTACGGTAACATTCGGTCAGTTGTCAGTCCTTGTCGACGATTCTCCCGTTTATTGACACCGCCATG
ATTTAGCTATCCCTATGGCAGCGCAAGGCAGAGCGACACTGTCGTCATGATCTCCGATGCGTTCCAGCCTCTGAG
CTATTGGAGTGGATTCATGGCTTATCCTGGATTCGAGGGGGTTATGATCGACACTCACCACTACCAGATCTTCAA
TGATGAGGTAAAGTGTCATGGCTTCTTAGGATGTCCGTCCGAGGTTTAACGCGTATTTGCAGCTCAACAGGATGA
GTCCTGAACAGCACATTCAAATGGCCTGCAGCAGGGGAAGAGAACTGGCCGCTTCTCATCTCTGGATTGCCGTTG
GCGAATGGTCTCCTGCTCGGACTGACTGTGCCAGGTACCTCAACGGTCGTGGCGTTGGCAGTCGCTTCGAAGGAA
CATACCCTGGCTCAAGCCACATCGGCAGCTGCCGCAGTTTCACTGGCCCTGCATCCGGATATAGCCAAAGCTACA
AGAACTTCTTGCGACAATTCTGGGAGGCTCAGACCATCGCATTCGAGAGGGGCGGTGATGGCTGGATTCAGTGGA
CCTGGAAGGCGGAGGAGGCTCACGAGTGGTCGTATCAGGCTGGGTTGAGGAACGGATGGATCCCAAGGAACCCGA
CTGACAGGATGTACCCCAACATCTGCGGCTGA
Length 1757