CC1G_13340
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_13340 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8PII0 | Functional description | Pyranose dehydrogenase |
| Location | U380:3297..5619 | Strand | - |
| Gene length (nt) | 2323 | Transcript length (nt) | 1782 |
| CDS length (nt) | 1782 | Protein length (aa) | 593 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits | |
|---|---|---|---|---|---|
| No records | |||||
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||
General data
| Systematic name | - |
|---|---|
| Protein id | 11005 |
| Description | Pyranose dehydrogenase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 44 | 361 |
| Pfam | PF05199 | GMC oxidoreductase | IPR007867 | 447 | 585 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| SP(Sec/SPI) | 1 | 24 | 0.6168 |
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
InterPro
| Accession | Description |
|---|---|
| IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR012132 | Glucose-methanol-choline oxidoreductase |
| IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
| GO:0050660 | flavin adenine dinucleotide binding | MF |
KEGG
| KEGG Orthology |
|---|
| K00108 |
| K20154 |
EggNOG
| COG category | Description |
|---|---|
| E | Aryl-alcohol oxidase |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| AA | AA3 | AA3_2 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_13340 across fungi.
Arrow shows the origin of gene family containing CC1G_13340.
Protein
| Sequence id | 11005 |
|---|---|
| Sequence |
>11005 MRLEGYFSLTHCALVVVAVHVALSTGLVLQNLSELSPNASAGVYDFIVVGGGVGGSVVASRLSENPKWNILLIEA GPDNIDVPSITIPAFFQRTHATYNWNYTTVPQAGLNNRSIPYLRGHVLGGSSSINAMVYTRGAKDDYDLWGRVAS DKRWSWDGLWKWMLRNERWVNAPGNRSTAGEYDPRFHSLTGKTAVSLAWDSATEFDRRALENTNLQDEIKFNLDM NDGSILGLGWAQLSIGNGERSSAATSYLGAEVRKRPNLTILLNTYVTRILPTKSRDGVLNLRTVEMAPRNGALVG YPGSTRTITSKKETILSAGAFNSPQILLNSGIGDQRDLAEVGVKPIHHLPDVGKGMTDHPTLFLSWRVNDTAVPI DEVQALAEWNANRTGPLTWPIGHQIWFARLPSSADVFKKYKDPSSGPTAAHIELPLPRPGSNFTSRCILLTPYSR GSVQLRSSNPFDAPLIDTGFLTHPFDIEALIEGIRLSKRWYEGPAWKGYVTEFLGPDPDKLTPSELESQIRDGVA TYWHAVGTTAMSPKGTNRGVVDSELKVKGVKGVRTVDAGVIPYVPSVHTQVPVYVLAERAADFIRSSW |
| Length | 593 |
Coding
| Sequence id | CC1G_13340T0 |
|---|---|
| Sequence |
>CC1G_13340T0 ATGAGGCTGGAGGGGTACTTCAGCCTAACGCACTGCGCGCTCGTTGTCGTGGCTGTCCACGTAGCGCTCAGCACG GGACTGGTGCTTCAAAATCTTTCGGAACTTTCACCAAATGCCAGCGCTGGAGTGTATGACTTTATCGTCGTCGGT GGCGGCGTCGGAGGCTCTGTCGTAGCCAGTAGACTATCCGAAAATCCGAAATGGAACATCTTGCTCATCGAAGCA GGTCCCGATAACATCGATGTCCCGTCAATCACAATACCGGCGTTCTTCCAACGCACTCACGCAACCTACAACTGG AACTACACGACCGTTCCTCAAGCCGGATTGAACAATCGCTCTATTCCGTACCTTCGAGGCCACGTATTGGGAGGG AGCAGTTCCATCAATGCGATGGTCTACACCCGAGGAGCGAAGGATGATTATGATCTCTGGGGTCGAGTCGCGAGC GATAAGCGGTGGAGCTGGGACGGACTGTGGAAATGGATGTTGCGGAACGAACGTTGGGTCAACGCACCAGGAAAC CGCTCGACAGCAGGAGAATACGACCCCCGCTTCCATAGCCTCACGGGAAAAACTGCAGTCAGCTTGGCTTGGGAC AGCGCGACGGAGTTCGATCGCCGGGCGTTGGAGAATACCAACCTCCAAGACGAGATCAAGTTCAATCTCGACATG AATGACGGGTCTATTCTCGGATTAGGTTGGGCGCAACTGAGTATTGGAAATGGAGAGCGAAGTAGTGCTGCCACG TCGTATCTGGGCGCGGAAGTTCGAAAGAGGCCTAACTTGACCATCCTTTTGAACACCTACGTGACTCGCATCCTT CCCACCAAGAGTAGAGACGGCGTGCTCAATCTCCGTACGGTCGAGATGGCTCCAAGGAATGGTGCTCTCGTTGGC TACCCAGGTTCAACTCGAACCATAACGTCCAAGAAGGAAACGATCCTTTCCGCAGGAGCCTTCAACTCTCCCCAG ATCCTTCTAAACTCTGGAATAGGCGATCAGCGCGATCTGGCAGAAGTTGGTGTAAAGCCAATCCACCACCTTCCC GACGTTGGGAAAGGGATGACTGACCACCCGACGTTGTTCTTGAGTTGGAGGGTGAACGATACGGCGGTTCCTATC GACGAAGTTCAGGCGTTAGCGGAGTGGAATGCCAACCGCACGGGCCCGCTGACCTGGCCTATCGGTCATCAGATA TGGTTCGCGCGCCTCCCGTCCAGCGCCGATGTATTCAAGAAGTACAAGGACCCTTCCTCTGGACCTACGGCTGCA CATATTGAACTGCCACTGCCCAGACCAGGGTCAAATTTCACGAGTCGATGTATCCTACTCACGCCATACTCTCGT GGATCAGTACAGCTCCGCTCCTCCAACCCCTTCGACGCACCACTCATTGATACAGGATTCCTCACCCACCCATTC GACATCGAGGCTTTGATCGAGGGTATCCGTCTCTCTAAGCGCTGGTACGAAGGACCCGCCTGGAAAGGATACGTC ACCGAGTTCCTCGGGCCTGATCCTGACAAGCTCACCCCATCGGAATTGGAATCCCAGATCAGAGACGGGGTAGCG ACGTATTGGCATGCGGTTGGTACGACTGCCATGTCACCCAAAGGCACGAACCGTGGGGTGGTGGATTCAGAGTTG AAGGTGAAAGGTGTAAAGGGTGTGAGGACTGTTGATGCTGGAGTGATTCCGTATGTGCCGTCGGTGCACACTCAG GTTCCGGTATACGTGTTGGCGGAGAGGGCAGCCGATTTCATTCGCAGCTCGTGG |
| Length | 1782 |
Transcript
| Sequence id | CC1G_13340T0 |
|---|---|
| Sequence |
>CC1G_13340T0 ATGAGGCTGGAGGGGTACTTCAGCCTAACGCACTGCGCGCTCGTTGTCGTGGCTGTCCACGTAGCGCTCAGCACG GGACTGGTGCTTCAAAATCTTTCGGAACTTTCACCAAATGCCAGCGCTGGAGTGTATGACTTTATCGTCGTCGGT GGCGGCGTCGGAGGCTCTGTCGTAGCCAGTAGACTATCCGAAAATCCGAAATGGAACATCTTGCTCATCGAAGCA GGTCCCGATAACATCGATGTCCCGTCAATCACAATACCGGCGTTCTTCCAACGCACTCACGCAACCTACAACTGG AACTACACGACCGTTCCTCAAGCCGGATTGAACAATCGCTCTATTCCGTACCTTCGAGGCCACGTATTGGGAGGG AGCAGTTCCATCAATGCGATGGTCTACACCCGAGGAGCGAAGGATGATTATGATCTCTGGGGTCGAGTCGCGAGC GATAAGCGGTGGAGCTGGGACGGACTGTGGAAATGGATGTTGCGGAACGAACGTTGGGTCAACGCACCAGGAAAC CGCTCGACAGCAGGAGAATACGACCCCCGCTTCCATAGCCTCACGGGAAAAACTGCAGTCAGCTTGGCTTGGGAC AGCGCGACGGAGTTCGATCGCCGGGCGTTGGAGAATACCAACCTCCAAGACGAGATCAAGTTCAATCTCGACATG AATGACGGGTCTATTCTCGGATTAGGTTGGGCGCAACTGAGTATTGGAAATGGAGAGCGAAGTAGTGCTGCCACG TCGTATCTGGGCGCGGAAGTTCGAAAGAGGCCTAACTTGACCATCCTTTTGAACACCTACGTGACTCGCATCCTT CCCACCAAGAGTAGAGACGGCGTGCTCAATCTCCGTACGGTCGAGATGGCTCCAAGGAATGGTGCTCTCGTTGGC TACCCAGGTTCAACTCGAACCATAACGTCCAAGAAGGAAACGATCCTTTCCGCAGGAGCCTTCAACTCTCCCCAG ATCCTTCTAAACTCTGGAATAGGCGATCAGCGCGATCTGGCAGAAGTTGGTGTAAAGCCAATCCACCACCTTCCC GACGTTGGGAAAGGGATGACTGACCACCCGACGTTGTTCTTGAGTTGGAGGGTGAACGATACGGCGGTTCCTATC GACGAAGTTCAGGCGTTAGCGGAGTGGAATGCCAACCGCACGGGCCCGCTGACCTGGCCTATCGGTCATCAGATA TGGTTCGCGCGCCTCCCGTCCAGCGCCGATGTATTCAAGAAGTACAAGGACCCTTCCTCTGGACCTACGGCTGCA CATATTGAACTGCCACTGCCCAGACCAGGGTCAAATTTCACGAGTCGATGTATCCTACTCACGCCATACTCTCGT GGATCAGTACAGCTCCGCTCCTCCAACCCCTTCGACGCACCACTCATTGATACAGGATTCCTCACCCACCCATTC GACATCGAGGCTTTGATCGAGGGTATCCGTCTCTCTAAGCGCTGGTACGAAGGACCCGCCTGGAAAGGATACGTC ACCGAGTTCCTCGGGCCTGATCCTGACAAGCTCACCCCATCGGAATTGGAATCCCAGATCAGAGACGGGGTAGCG ACGTATTGGCATGCGGTTGGTACGACTGCCATGTCACCCAAAGGCACGAACCGTGGGGTGGTGGATTCAGAGTTG AAGGTGAAAGGTGTAAAGGGTGTGAGGACTGTTGATGCTGGAGTGATTCCGTATGTGCCGTCGGTGCACACTCAG GTTCCGGTATACGTGTTGGCGGAGAGGGCAGCCGATTTCATTCGCAGCTCGTGGTAA |
| Length | 1782 |
Gene
| Sequence id | CC1G_13340T0 |
|---|---|
| Sequence |
>CC1G_13340T0 ATGAGGCTGGAGGGGTACTTCAGCCTAACGCACTGCGCGCTCGTTGTCGTGGCTGTCCACGTAGCGCTCAGCACG GGACTGGTGCTTCAAAATCTTTCGGAACTTTCACCAAATGCCAGCGCTGGAGTGTATGACTTTATCGTCGTCGGT GGTGCGTCTCTGTTCCTTCTTTTGCGATATATGACTGAGTCAGTGCCACCATCTTTTTAGGCGGCGTCGGAGGCT CTGTCGTAGCCAGTAGACTATCCGAAAATCCGAAATGGAACATCTTGCTCATCGAAGCAGGTCCCGAGTATGATC TACCTACCAATACCTTCTTCGGATATATACTAACGACCTTTCTTACCCAAGTAACATCGATGTCCCGTCAATCAC AATACCGGCGTTCTTCCAACGCACTCACGCAACCTACAACTGGAACTACACGACCGTTCCTCAAGCCGGATTGAA CAATCGCTCTATTCCGTACCTTCGAGGCCACGTATTGGGAGGGAGCAGTTCCATCAATGCGATGGTCTACACCCG AGGAGCGAAGGATGATTATGATCTCTGGGGTCGAGTCGCGAGCGATAAGCGGTGGAGCTGGGACGGACTGTGGAA ATGGATGTTGCGGGTGCGTTCTGTGCGAGTTTGCTGCGATTGTCTGAACATACCTGTGGCCGTAATAGAACGAAC GTTGGGTCAACGCACCAGGAAACCGCTCGACAGCAGGAGAATACGACCCCCGCTTCCATAGCCTCACGGGAAAAA CTGCAGTCAGCTTGGCTTGGGACAGCGCGACGGAGTTCGATCGCCGGGCGTTGGAGAATACCAACCTCCAAGACG AGATCAAGTTCAATCTCGACATGAATGACGGGTCTATTCTCGGATTAGGTGCGTATCCGAACCTCCTATGGCGTT AATTGATTTCCTGATAGGATCCACGCCCTCTATGCTTACCTGCTTTAAGGTTGGGCGCAACTGAGTATTGGAAAT GGAGAGCGAAGTAGTGCTGCCACGTCGTATCTGGGCGCGGAAGTTCGAAAGAGGCCTAACTTGACCATCCTTTTG AACACCTACGTGACTCGCATCCTTCCCACCAAGAGTAGAGACGGCGTGCTCAATCTCCGTACGGTCGAGATGGCT CCAAGGAATGGTGGTGCGTCTTTGTCATATCTCTTTTAATGCTCTACATATGGATAGCTCTCGTTGGCTACCCAG GTTCAACTCGAACCATAACGTCCAAGAAGGAAACGATCCTTTCCGCAGGAGCCTTCAACTCTCCCCAGATCCTTC TAAACTCTGGAATAGGCGATCAGCGCGATCTGGCAGAAGTTGGTGTAAAGCCAATCCACCACCTTCCCGACGTTG GGAAAGGGATGACTGACCACCCGACGTTGTTCTTGAGTTGGAGGGTGAACGATACGGCGGTTCCGTGAGTGTCGT GTAACGTGTCCTCCGAGTCATGAGGTCGGGCTAAAGTGCTGCTATTCCTCAGTATCGACGAAGTTCAGGCGTTAG CGGAGTGGAATGCCAACCGCACGGGCCCGCTGACCTGGCCTATCGGTCATCAGATATGGTTCGCGCGCCTCCCGT CCAGCGCCGATGTATTCAAGAAGTACAAGGACCCTTCCTCTGGACCTACGGCTGCACATATTGAACTGCCACTGC CCGTAAAGTCGCTTATCCTCCTGACGGTCGAAGTCTGGAACTGATATCGTTACTACAGAGACCAGGGTCAAATTT CACGAGTCGATGTATCCTACTCACGCCATACTCTCGTGCGTTCTCTTTCTCTCGCTTTCCAGTTTAAAGTCTAGC GCTTATCCAGATTCATACGGCAAGACAGGTGGATCAGTACAGCTCCGCTCCTCCAACCCCTTCGACGCACCACTC ATTGATACAGGATTCCTCACCCACCCATTCGACATCGAGGCTTTGATCGAGGGTATCCGTCTCTCTAAGCGCTGG TACGAAGGACCCGCCTGGAAAGGATACGTCACCGAGTTCCTCGGGCCTGATCCTGACAAGCTCACCCCATCGGAA TTGGAATCCCAGATCAGAGACGGGGTAGCGACGTATTGGCATGCGGTTGGTACGACTGCCATGTCACCCAAAGGC ACGAACCGTGGGGTGGTGGATTCAGAGTTGAAGGTGAAAGGTGTAAAGGGTGTGAGGACTGTTGATGCTGGAGTG ATTGTGAGTGCTTTTCTTCTCCTCGTTAAAGGCGGGTTGCTCAGATATGATGGTCATGATGTAGCCGTATGTGCC GTCGGTGCACACTCAGGTTCCGGTATACGTGTTGGCGGAGAGGGCAGCCGATTTCATTCGCAGCTCGTGGTAA |
| Length | 2323 |