CopciAB_355151
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_355151 Strain Coprinopsis cinerea Okayama 7
Standard name CTK1 Synonyms 355151
Uniprot id Functional description Serine/Threonine protein kinases, catalytic domain
Location scaffold_5:1693348..1697672 Strand -
Gene length (nt) 4325 Transcript length (nt) 3910
CDS length (nt) 3369 Protein length (aa) 1122

Reciprocal best hits in model fungi

Strain name Gene / Protein name
Schizosaccharomyces pombe lsk1
Saccharomyces cerevisiae YKL139W_CTK1

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7259797 44.4 1.141E-264 843
Hypsizygus marmoreus strain 51987-8 Hypma_RDB22704 42.8 1.168E-253 811
Pleurotus ostreatus PC9 PleosPC9_1_109598 43.8 2.046E-238 766
Lentinula edodes W1-26 v1.0 Lentinedodes1_14192 37.9 4.932E-210 683
Pleurotus eryngii ATCC 90797 Pleery1_1573001 55.4 2.963E-186 613
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_150275 83.2 1.457E-175 581
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_84564 83.2 1.518E-175 581
Pleurotus ostreatus PC15 PleosPC15_2_1092976 82.7 1.847E-172 572
Lentinula edodes NBRC 111202 Lenedo1_1034479 56.5 1.02E-171 570
Schizophyllum commune H4-8 Schco3_1080660 76.5 1.551E-159 534
Ganoderma sp. 10597 SS1 v1.0 Gansp1_40799 72.2 2.873E-156 524
Lentinula edodes B17 Lened_B_1_1_10127 76.2 2.84E-144 488
Auricularia subglabra Aurde3_1_1150568 60.4 1.26E-142 484
Grifola frondosa Grifr_OBZ70200 80 7.135E-143 484

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 101.3275 2.8463 1.6433
oidia 52.1639 5.2124 3.0094
vegetative_mycelium 47.9737 6.057 3.497
primordia 79.996 3.9013 2.2524
hyphal_knot 69.0283 2.4084 1.3905
young_fruiting_body 77.9748 1.637 0.9452
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 63.6727 1.7425 1.006
Wheat bran 41.1986 13.4297 7.7536
Horse manure 61.8673 14.7349 8.5072
Oak leaves 81.3363 23.0365 13.3001
Hay 53.9001 4.5925 2.6515
Corn stalk 55.6671 1.1346 0.6551
Pectine 59.581 3.2697 1.8878
Microcrystalline cellulose 75.9974 11.8558 6.8449
Xylose 63.1106 6.3291 3.6541
Cellobiose 58.4073 6.6476 3.838
Lignin 79.4617 20.8859 12.0585
Apple peels 63.5815 6.0099 3.4698
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 43.2013 2.8944 1.6711
Bsubtilis 47.5878 3.8676 2.233
Ecoli 46.5902 3.6563 2.111
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 92.9831 14.1176 8.1508
BS 4h 62.3816 12.3262 7.1165
BS 8h 49.3055 4.5394 2.6208
BS 12h 30.2997 2.4433 1.4106
Oidia 0 h 38.4043 14.112 8.1476
Oidia 18 h 38.5582 3.9598 2.2862
Sclerotia 51.4846 4.4589 2.5743
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 21.1375 4.5424 2.6226
DM 36h 33.167 2.3702 1.3684
DM 60h 27.8715 3.1399 1.8128
DM 84h 21.622 5.4982 3.1744
DM 108h 21.3755 2.2612 1.3055
DM 132h 22.4748 4.4208 2.5524
DM 156hAE 26.4043 1.6377 0.9455
ELI1hAE 39.7592 12.0085 6.9331
ELI2hAE 36.5853 7.1948 4.1539
LI2hAE 37.6476 12.6492 7.303
LI6hAE 28.4095 4.9117 2.8358
LI12hAE 40.5737 4.5671 2.6368
LI18hAE 40.2529 11.2851 6.5154
LI 24hAE 30.389 5.733 3.31
DM 156hAM 27.0661 0.7068 0.4081
ELI1hAM 46.3581 12.7599 7.3669
ELI2hAM 41.1558 15.0445 8.6859
LI2hAM 40.9209 7.2895 4.2086
LI6hAM 38.5228 2.7905 1.6111
LI12hAM 30.8855 7.7291 4.4624
LI18hAM 33.7447 6.4229 3.7082
LI 24hAM 30.9829 6.6818 3.8577
LI 24hHK 30.5629 5.5069 3.1794
L/D 6h 36.253 6.945 4.0097
L/D 12h 34.5858 2.4972 1.4418
L/D 18h 37.012 6.4817 3.7422
L/D 24h 44.9915 3.4718 2.0045
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 33.6599 3.215 1.8562
Hyphal knots 43.7542 0.9855 0.569
Primordium 1 45.9276 5.7265 3.3062
Primordium 2 40.9441 4.2386 2.4471
Young Fruiting body cap 84.8985 10.8845 6.2842
Younf fruiting body gill 55.1793 5.5232 3.1888
Young fruiting body stipe 68.7737 10.8623 6.2714
Mature fruiting body cap_gill 41.1198 9.5772 5.5294
Mature fruiting body stipe 53.3047 4.6894 2.7074
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 49.13 1.0163 0.5867
NH4NO3 53.6928 3.1805 1.8363
Proline 55.3332 6.0569 3.497
Tryptophan 51.3816 13.8598 8.002
Isoleucin 61.0318 2.5824 1.491
Arginine 43.5051 2.1248 1.2268
Metionine 53.2875 1.0831 0.6253
NaNO3 45.2529 0.9834 0.5677
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 49.13 1.0163 0.5867
Citrus peel 28.7204 5.508 3.18
Poplar leaves 46.9514 8.7603 5.0578
Typha leaves 46.5796 8.8882 5.1316
Overwintered Salix leaves 48.1922 5.3659 3.098
Reed flowering 47.4241 7.8137 4.5113
Tigernut 39.4183 1.4851 0.8574
Energy cane 43.8909 1.949 1.1253
Guar gum 41.4125 12.2918 7.0967
Apple peels 39.4703 10.2159 5.8981
Cellobiose 53.0909 1.5157 0.8751
Corn stalk 39.4266 4.4753 2.5838
Horse manure 39.1702 7.6299 4.4051
Lignin 31.8156 11.4044 6.5843
Microcrystalline cellulose 45.4219 5.2824 3.0498
Oak leaves 39.3131 4.827 2.7869
Pectin esterified 34.7875 1.2299 0.7101
Poplar sawdust 37.88 7.3667 4.2532
Wheat bran 29.6991 2.9356 1.6949
Chlamydomonas reinhardtii 48.632 2.5013 1.4441
Vertatryl alcohol 52.1965 0.6163 0.3558
Furfural 41.7308 2.8084 1.6215
Autoclaved mycelium 59.817 8.8644 5.1178
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 54.8867 5.0055 2.8899
Ribose 57.5964 1.7008 0.982
Mannose 60.6027 0.0686 0.0485
Fructose 53.8008 1.2134 0.7005
Arabinose 60.4137 5.4853 3.1669
Xylose 62.566 3.299 1.9047
Galacturonic acid 57.5985 3.2034 1.8495
Rhamnogalacturonan 56.6976 1.881 1.086
Pectin esterified 54.459 2.9225 1.6873
Polygalacturonic acid 54.4814 4.3137 2.4905
Sodium acetate 57.0889 3.1364 1.8108
No nitrogen 61.6721 3.1822 1.8373
BSA 59.2391 0.2697 0.1557
Glutamine 61.1586 4.4354 2.5608
No phosphate 62.7252 3.2616 1.8831
No carbon 58.2937 4.2232 2.9863
No sulphur 70.8127 12.5687 7.2566
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 49.13 1.0163 0.5867
Amylose 40.4002 2.6408 1.5247
Fucose 43.2667 4.4565 2.573
Galactose 43.5613 2.1686 1.2521
Lactose 49.5441 2.656 1.5334
Maltose 46.797 3.0089 1.7372
Mannitol 56.8521 3.9495 2.2802
Rhamnose 47.8061 4.7296 2.7306
Sorbitol 41.4462 1.1215 0.6475
Trehalose 40.0786 8.438 4.8717
Glycerol 47.6701 4.3125 2.4898
Glucuronic acid 44.8457 3.3203 1.917
Arabinan 35.3176 7.9973 4.6172
Galactan 47.2404 3.0794 1.7779
Galactomannan 41.3404 2.8192 1.6277
Glucan 43.8314 5.7405 3.3143
Xylan 42.8273 2.9916 1.7272
Xyloglucan 49.2479 4.7983 2.7703
Arabinogalactan 49.8883 2.7789 1.6044
Pectin 29.5349 9.6967 5.5984
Rhamnogalacturonan 39.1408 7.0568 4.0743
Polygalacturonic acid 44.3027 5.8181 3.3591
Mannan 41.0327 1.7044 0.984
Amylopectin 34.1085 4.5923 2.6514
Inulin 50.7021 4.4483 2.5683
BSA 54.1413 0.5971 0.3447
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 27.8715 3.1399 1.8128
2h WAT 33.8047 4.5738 2.6407
4h WAT 27.6105 2.4546 1.4172
8h WAT 34.9425 2.109 1.2176
16h WAT 33.5136 6.4919 3.7481
24h WAT 32.7559 2.6772 1.5457
WAT hyphal knot -30h 45.6815 8.3437 4.8172
WAT hyphal knot -22h 41.0076 5.5768 3.2197
WAT hyphal knot -15h 34.5655 4.1617 2.4027
WAT hyphal knot -7.5h 36.9068 9.8111 5.6644
WAT hyphal knot 46.2668 10.4209 6.0165
WAT hyphal knot +7.5h 40.6109 5.4844 3.1664
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 38.7016 15.2816 8.8228
Straw 3h 38.9786 9.3721 5.411
Straw 6h 32.5605 4.1805 2.4136
Straw 12h 41.3706 1.2764 0.7369
Straw 24h 38.7382 8.6187 4.976
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 33.0095 7.1876 4.1498
Frost (-20C, 30min) 38.3086 3.1403 1.813
Heat shock (47C, 2h) 66.2832 6.5154 3.7617
High CO2 28.8984 4.4027 2.5419
Drought (4% agar, 12h) 44.2559 8.6814 5.0122
Oxidative (1mM H2O2, 3h) 43.0411 15.4043 8.8937
Acidic (pH4, 3h) 29.2367 4.0129 2.3169
Alkaline (pH9, 3h) 34.9062 0.7371 0.4256
Osmotic (sorbitol 2h) 36.2087 7.3588 4.2486
CongoRed (3h) 30.1901 8.9555 5.1705
Cobalt chloride control 48.4311 7.931 4.579
Cobalt chloride 2mM 35.7431 3.4835 2.0112
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 31.1437 10.8659 6.2734
Cold stimulation 21.996 1.3161 0.7598
Scratched surface 70.2503 9.2456 5.338
Ca2+, 200mM, 24h 34.3711 5.2757 3.0459
Cu2+, 2mM, 6h 32.3293 9.4985 5.4839
Voriconazole 21.5597 8.1154 4.6854
Trichoderma interaction, early 38.3679 6.5521 3.7828
Trichoderma interaction 60h 21.5288 13.8331 7.9865
Cobalt chloride 2mM repeat 27.6986 10.4133 6.0121
Hypoxia 24.7031 10.1956 5.8864
Hypoxia control 25.816 1.2226 0.7059
Protoplastation control 40.0272 1.2821 0.9066
Protoplastation 3.5h 42.7432 11.6562 8.2422
Protoplastation 1.5h 37.6872 6.5433 4.6268

General data

Systematic name CTK1
Protein id CopciAB_355151.T0
Description Serine/Threonine protein kinases, catalytic domain

Annotation summary

0 300 600 900 1122

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd07840 STKc_CDK9_like - 798 1082
Pfam PF00069 Protein kinase domain IPR000719 798 1082

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR000719 Protein kinase domain
IPR008271 Serine/threonine-protein kinase, active site
IPR011009 Protein kinase-like domain superfamily
IPR017441 Protein kinase, ATP binding site

GO

Go id Term Ontology
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP

KEGG

KEGG Orthology
K00916

EggNOG

COG category Description
D Serine/Threonine protein kinases, catalytic domain

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_355151 across fungi.

Arrow shows the origin of gene family containing CopciAB_355151.

Protein

Sequence id CopciAB_355151.T0
Sequence >CopciAB_355151.T0
MRNQGRNRRSRNHKEVNDTQLNIPRDDPQVQSYSRHQHPSHYSDAHRLPSTMPSRSTYEVGRDRNVAPGRSLREG
DWGTSGSHDRYGYDLYPPEHDAYDDPLRRDAGAWGGGNDGYSSRGGWSHSYHHPEPSTSYQDSSNWKPTSPTAHH
YGSSSHYKPPVDPYMEPNPYLPRSPTHFTERSPLGYDDPQSYYYEQWRGRDPRPSPSDEKMDYNQIDKRGAQGWR
RSSGGGKGGQPKFQSDSGWSGRKKSKEWGNSNQQRYDEKQPEPLYSSVEDRSWEPADSWKSSNRHEGGASTSKHQ
QHHTPGRPGTQQQSKSSRKEKKSGKQKKEWKNEDLNLNNWTRRDHLASKKNQDKSQGSGSRKKHRRSRSRSRSRD
SLRSHHSSYRSRSSSPVAKRRRRGSSPMLRSRSPEGDQMGWLPPRDEDRMVSRSPSPGYRRRSPSTSDRSSHRSR
SPSPYERPRAVHRLPTANSSALHTAPATGKSKKAGKQRNGHKNARGSTGKQPARYPEDDVAADSLSMPPPPPPSR
PKQSRQQTPDWRDEHTPLLNPNPNGLPPKPISLPEKPTRIVPQRNAGFKPIGQSNSALKMFFPGDEDEADYISSS
NLTKDARTEPTPTKGFTRQTLLDDTRNGREAENPHQYGNDPPPISRPPASWDPYASTYPVDPRVPTQSYTNGLTP
HLPEPPPHIPHRTGQTQSYWKSPAVSPPPESDASRWSGVPVPPVHPNLPPTYTASVPPRPGYELPYRPPVPVDNA
PVSHTTKSTPQPSPIPISDPSPAWQASASASGVATPVAPEQPESKDLYVILNQVGEGTFGKVYKARNTVAKVHVA
LKRIRMETERDGFPVTAMREIKLLQSLKHPNVVQLYEMMVSNGSVFMVFEYMDHDLTGILSQTQFKFSDSHLKSL
CHQMLAGLAYLHHKGVIHRDIKGSNILLNNRGELKLADFGLARFYQKRRRTDYTNRVITLWYRPPELLFGATVYG
PEVDMWSAGCIMLELFTKKPVFQGNDEINQLHVIFKILGTPTTERWTGLNNLPWFELIKPKESLPNRFRDLFQKW
MSPAALDLAERLLTYDPELRVSAQEAMEAPYFTQERPFAERPAGLASLDGEWHELETKQERLKKRKKTESTA
Length 1122

Coding

Sequence id CopciAB_355151.T0
Sequence >CopciAB_355151.T0
ATGCGTAATCAGGGAAGAAATAGGCGGTCCCGTAACCACAAGGAGGTCAATGACACCCAGCTCAACATCCCTCGT
GATGACCCGCAGGTTCAGTCGTATTCGCGACATCAACATCCGTCTCACTACAGCGACGCCCATCGATTACCGTCC
ACGATGCCCAGTAGGTCTACGTATGAAGTGGGAAGGGACAGGAATGTAGCCCCAGGTCGAAGTTTGCGTGAGGGT
GACTGGGGCACAAGCGGGAGTCACGACCGTTACGGCTACGACCTATACCCCCCTGAACATGACGCTTACGACGAT
CCATTAAGGAGGGATGCTGGTGCTTGGGGAGGGGGCAATGACGGTTACTCGTCTCGCGGAGGTTGGTCTCACTCA
TATCATCATCCTGAACCGTCCACGTCGTATCAGGATTCGTCAAATTGGAAACCAACCTCCCCAACAGCCCACCAC
TACGGCAGCAGCTCGCACTACAAGCCTCCCGTTGACCCATACATGGAACCCAATCCGTATCTGCCTCGAAGCCCA
ACCCATTTTACAGAACGAAGTCCGCTCGGCTACGACGACCCTCAAAGCTACTATTACGAACAATGGCGTGGGCGA
GACCCACGGCCGAGTCCTTCCGACGAGAAAATGGATTACAACCAAATCGACAAACGAGGGGCTCAGGGATGGAGG
AGGAGCAGCGGTGGGGGTAAGGGTGGGCAACCCAAGTTCCAGAGCGACTCTGGTTGGTCAGGGCGGAAGAAGAGC
AAAGAATGGGGCAATTCCAATCAACAGCGCTACGATGAGAAGCAACCTGAACCACTCTATTCGAGCGTAGAAGAC
AGGTCATGGGAGCCAGCGGATTCATGGAAATCCTCCAACCGCCACGAGGGCGGCGCCAGTACCTCCAAGCATCAG
CAGCACCACACTCCTGGTCGCCCGGGCACACAACAGCAGTCAAAATCATCACGCAAAGAGAAAAAATCGGGCAAG
CAAAAGAAGGAATGGAAAAACGAAGACTTGAATCTTAACAACTGGACACGCAGGGACCATTTGGCCTCGAAAAAG
AACCAAGACAAGTCACAAGGTTCGGGTTCAAGGAAGAAACATCGCCGGTCTCGCTCAAGGTCCCGGTCGCGAGAC
TCTTTGCGCTCGCACCATTCATCCTACCGCTCGAGGTCCTCCTCTCCCGTGGCAAAGCGAAGGCGGAGAGGATCC
AGCCCAATGCTTCGCAGTAGGTCTCCGGAAGGGGATCAAATGGGCTGGCTACCACCACGAGATGAGGATAGAATG
GTCTCGCGATCGCCCTCACCTGGATATCGAAGGAGGTCCCCGTCGACATCAGATCGATCTAGCCACCGTAGTCGA
AGCCCCAGCCCCTATGAGCGACCCCGAGCAGTTCATCGCCTCCCGACGGCCAATTCGAGCGCGTTGCACACGGCA
CCTGCGACGGGGAAATCCAAAAAAGCTGGAAAACAGCGAAACGGGCACAAAAATGCTCGAGGTTCGACTGGCAAG
CAGCCCGCAAGGTATCCCGAAGACGATGTTGCCGCAGACTCCCTTTCCATGCCTCCTCCACCGCCGCCTTCTCGG
CCAAAGCAATCGCGGCAGCAAACTCCCGACTGGAGAGACGAACACACTCCACTTCTTAATCCAAACCCCAACGGA
CTTCCTCCCAAGCCCATATCGCTTCCAGAGAAACCCACCCGGATTGTCCCCCAAAGGAATGCGGGCTTCAAACCT
ATCGGGCAGTCCAACTCTGCCTTGAAAATGTTTTTCCCTGGGGACGAGGACGAGGCGGATTATATTTCCAGTAGC
AATCTTACAAAGGACGCTCGCACCGAGCCGACCCCAACAAAGGGCTTCACTCGCCAAACTCTACTGGACGATACT
CGCAACGGCCGTGAGGCAGAGAATCCACATCAATACGGGAATGACCCGCCTCCCATATCCCGCCCACCAGCAAGT
TGGGACCCTTATGCAAGCACATACCCAGTGGATCCAAGGGTACCAACTCAGTCATACACCAACGGTTTAACACCA
CATCTCCCAGAACCCCCTCCTCATATCCCTCACCGGACTGGGCAAACGCAGTCTTACTGGAAATCTCCGGCCGTC
TCTCCACCTCCAGAGTCTGACGCTTCAAGATGGAGTGGAGTGCCTGTTCCTCCGGTGCACCCCAACTTGCCCCCA
ACATACACGGCAAGCGTGCCTCCTCGACCTGGTTATGAATTGCCGTACCGACCACCAGTTCCTGTGGACAACGCA
CCGGTTTCCCATACAACTAAAAGCACTCCTCAGCCCTCTCCGATACCAATATCAGATCCTTCACCGGCTTGGCAA
GCTTCCGCCTCTGCTTCTGGGGTAGCTACTCCTGTCGCCCCTGAGCAGCCAGAAAGCAAAGATCTCTATGTTATC
CTAAACCAGGTTGGAGAAGGAACGTTCGGAAAGGTCTATAAAGCCCGCAACACGGTTGCCAAAGTCCATGTCGCA
CTCAAACGCATTCGAATGGAGACCGAGCGAGACGGCTTCCCTGTGACCGCCATGCGGGAAATCAAACTCCTCCAG
TCCTTGAAACATCCTAACGTCGTTCAGCTCTACGAAATGATGGTGTCAAATGGATCTGTATTCATGGTTTTCGAG
TACATGGATCATGACCTTACAGGGATTCTGTCGCAGACGCAGTTCAAATTTTCAGACTCGCACCTCAAATCCCTT
TGTCACCAGATGCTCGCAGGGCTTGCGTATCTCCATCACAAGGGTGTCATTCACCGCGACATCAAAGGCTCGAAC
ATTCTCCTGAACAACCGCGGTGAATTGAAGCTGGCCGACTTTGGCTTAGCCCGTTTCTATCAGAAGCGTCGGCGC
ACAGACTACACCAACCGAGTTATCACCCTTTGGTACCGACCCCCCGAGCTTCTCTTTGGAGCAACAGTATATGGA
CCTGAAGTCGATATGTGGAGTGCTGGTTGCATCATGTTGGAGCTATTCACGAAGAAGCCCGTTTTCCAAGGGAAC
GACGAAATCAACCAGCTTCATGTTATCTTCAAGATACTCGGTACACCAACGACGGAAAGATGGACTGGGCTGAAC
AACCTTCCCTGGTTTGAACTTATCAAACCGAAAGAATCTTTACCCAACCGCTTCAGAGACCTCTTCCAAAAATGG
ATGTCTCCGGCAGCGTTGGATCTGGCTGAACGGCTGTTGACATATGATCCCGAACTTCGTGTCTCCGCTCAAGAA
GCAATGGAAGCTCCTTATTTCACTCAGGAACGACCATTTGCAGAAAGGCCAGCAGGCCTTGCTTCGCTAGATGGA
GAATGGCACGAGCTGGAAACCAAGCAGGAACGCTTAAAGAAGCGCAAAAAGACTGAAAGTACAGCCTAA
Length 3369

Transcript

Sequence id CopciAB_355151.T0
Sequence >CopciAB_355151.T0
AGCGCGTTCTTGAGCTCCGACGCTTGCGCTCGATCGTCCAAGCCGAACTTGCACAGCTACAATCTCTCGAACCGT
CTGCATGCGACTCATCCGTGTTAACGTCGCATGAAACTTAGCGGAAATTACTCTTGGAATAGGGTTATTTGGAGC
GTGTTACAACCTCAATTCGGTTCTGTCACTTCAGAGGGTTTGGGCCTTCCCCTGGTCCGCTAGTACAGGCGACTA
CGGCGTAACGATTAACGGAATCGAGCATCCAGCCCACGGCTTGTCCGGGATTTCAGTGGAGGAGGGTTAGGTGAA
CCCTTGCATTTTTCTTCCAGCACTTACCATTGCGACTGCGGACGACTTCCAGCGCCCACGCAAACATCGACGTAT
CTTCAAGCACCAACCATGCGTAATCAGGGAAGAAATAGGCGGTCCCGTAACCACAAGGAGGTCAATGACACCCAG
CTCAACATCCCTCGTGATGACCCGCAGGTTCAGTCGTATTCGCGACATCAACATCCGTCTCACTACAGCGACGCC
CATCGATTACCGTCCACGATGCCCAGTAGGTCTACGTATGAAGTGGGAAGGGACAGGAATGTAGCCCCAGGTCGA
AGTTTGCGTGAGGGTGACTGGGGCACAAGCGGGAGTCACGACCGTTACGGCTACGACCTATACCCCCCTGAACAT
GACGCTTACGACGATCCATTAAGGAGGGATGCTGGTGCTTGGGGAGGGGGCAATGACGGTTACTCGTCTCGCGGA
GGTTGGTCTCACTCATATCATCATCCTGAACCGTCCACGTCGTATCAGGATTCGTCAAATTGGAAACCAACCTCC
CCAACAGCCCACCACTACGGCAGCAGCTCGCACTACAAGCCTCCCGTTGACCCATACATGGAACCCAATCCGTAT
CTGCCTCGAAGCCCAACCCATTTTACAGAACGAAGTCCGCTCGGCTACGACGACCCTCAAAGCTACTATTACGAA
CAATGGCGTGGGCGAGACCCACGGCCGAGTCCTTCCGACGAGAAAATGGATTACAACCAAATCGACAAACGAGGG
GCTCAGGGATGGAGGAGGAGCAGCGGTGGGGGTAAGGGTGGGCAACCCAAGTTCCAGAGCGACTCTGGTTGGTCA
GGGCGGAAGAAGAGCAAAGAATGGGGCAATTCCAATCAACAGCGCTACGATGAGAAGCAACCTGAACCACTCTAT
TCGAGCGTAGAAGACAGGTCATGGGAGCCAGCGGATTCATGGAAATCCTCCAACCGCCACGAGGGCGGCGCCAGT
ACCTCCAAGCATCAGCAGCACCACACTCCTGGTCGCCCGGGCACACAACAGCAGTCAAAATCATCACGCAAAGAG
AAAAAATCGGGCAAGCAAAAGAAGGAATGGAAAAACGAAGACTTGAATCTTAACAACTGGACACGCAGGGACCAT
TTGGCCTCGAAAAAGAACCAAGACAAGTCACAAGGTTCGGGTTCAAGGAAGAAACATCGCCGGTCTCGCTCAAGG
TCCCGGTCGCGAGACTCTTTGCGCTCGCACCATTCATCCTACCGCTCGAGGTCCTCCTCTCCCGTGGCAAAGCGA
AGGCGGAGAGGATCCAGCCCAATGCTTCGCAGTAGGTCTCCGGAAGGGGATCAAATGGGCTGGCTACCACCACGA
GATGAGGATAGAATGGTCTCGCGATCGCCCTCACCTGGATATCGAAGGAGGTCCCCGTCGACATCAGATCGATCT
AGCCACCGTAGTCGAAGCCCCAGCCCCTATGAGCGACCCCGAGCAGTTCATCGCCTCCCGACGGCCAATTCGAGC
GCGTTGCACACGGCACCTGCGACGGGGAAATCCAAAAAAGCTGGAAAACAGCGAAACGGGCACAAAAATGCTCGA
GGTTCGACTGGCAAGCAGCCCGCAAGGTATCCCGAAGACGATGTTGCCGCAGACTCCCTTTCCATGCCTCCTCCA
CCGCCGCCTTCTCGGCCAAAGCAATCGCGGCAGCAAACTCCCGACTGGAGAGACGAACACACTCCACTTCTTAAT
CCAAACCCCAACGGACTTCCTCCCAAGCCCATATCGCTTCCAGAGAAACCCACCCGGATTGTCCCCCAAAGGAAT
GCGGGCTTCAAACCTATCGGGCAGTCCAACTCTGCCTTGAAAATGTTTTTCCCTGGGGACGAGGACGAGGCGGAT
TATATTTCCAGTAGCAATCTTACAAAGGACGCTCGCACCGAGCCGACCCCAACAAAGGGCTTCACTCGCCAAACT
CTACTGGACGATACTCGCAACGGCCGTGAGGCAGAGAATCCACATCAATACGGGAATGACCCGCCTCCCATATCC
CGCCCACCAGCAAGTTGGGACCCTTATGCAAGCACATACCCAGTGGATCCAAGGGTACCAACTCAGTCATACACC
AACGGTTTAACACCACATCTCCCAGAACCCCCTCCTCATATCCCTCACCGGACTGGGCAAACGCAGTCTTACTGG
AAATCTCCGGCCGTCTCTCCACCTCCAGAGTCTGACGCTTCAAGATGGAGTGGAGTGCCTGTTCCTCCGGTGCAC
CCCAACTTGCCCCCAACATACACGGCAAGCGTGCCTCCTCGACCTGGTTATGAATTGCCGTACCGACCACCAGTT
CCTGTGGACAACGCACCGGTTTCCCATACAACTAAAAGCACTCCTCAGCCCTCTCCGATACCAATATCAGATCCT
TCACCGGCTTGGCAAGCTTCCGCCTCTGCTTCTGGGGTAGCTACTCCTGTCGCCCCTGAGCAGCCAGAAAGCAAA
GATCTCTATGTTATCCTAAACCAGGTTGGAGAAGGAACGTTCGGAAAGGTCTATAAAGCCCGCAACACGGTTGCC
AAAGTCCATGTCGCACTCAAACGCATTCGAATGGAGACCGAGCGAGACGGCTTCCCTGTGACCGCCATGCGGGAA
ATCAAACTCCTCCAGTCCTTGAAACATCCTAACGTCGTTCAGCTCTACGAAATGATGGTGTCAAATGGATCTGTA
TTCATGGTTTTCGAGTACATGGATCATGACCTTACAGGGATTCTGTCGCAGACGCAGTTCAAATTTTCAGACTCG
CACCTCAAATCCCTTTGTCACCAGATGCTCGCAGGGCTTGCGTATCTCCATCACAAGGGTGTCATTCACCGCGAC
ATCAAAGGCTCGAACATTCTCCTGAACAACCGCGGTGAATTGAAGCTGGCCGACTTTGGCTTAGCCCGTTTCTAT
CAGAAGCGTCGGCGCACAGACTACACCAACCGAGTTATCACCCTTTGGTACCGACCCCCCGAGCTTCTCTTTGGA
GCAACAGTATATGGACCTGAAGTCGATATGTGGAGTGCTGGTTGCATCATGTTGGAGCTATTCACGAAGAAGCCC
GTTTTCCAAGGGAACGACGAAATCAACCAGCTTCATGTTATCTTCAAGATACTCGGTACACCAACGACGGAAAGA
TGGACTGGGCTGAACAACCTTCCCTGGTTTGAACTTATCAAACCGAAAGAATCTTTACCCAACCGCTTCAGAGAC
CTCTTCCAAAAATGGATGTCTCCGGCAGCGTTGGATCTGGCTGAACGGCTGTTGACATATGATCCCGAACTTCGT
GTCTCCGCTCAAGAAGCAATGGAAGCTCCTTATTTCACTCAGGAACGACCATTTGCAGAAAGGCCAGCAGGCCTT
GCTTCGCTAGATGGAGAATGGCACGAGCTGGAAACCAAGCAGGAACGCTTAAAGAAGCGCAAAAAGACTGAAAGT
ACAGCCTAACGATGGCTGGAGCAATTTTTTTTCACCTCCTTAGTAGCTACCTTGGTGTTTTCTTACATGCCGGAC
CATCTCACTTTCCATTTGTATCATTATTGCTTTCCTTTAATTATATTATGCCGCGTTGTCTCCGTACAATGCAAG
TGATATGCCA
Length 3910

Gene

Sequence id CopciAB_355151.T0
Sequence >CopciAB_355151.T0
AGCGCGTTCTTGAGCTCCGACGCTTGCGCTCGATCGTCCAAGCCGAACTTGCACAGCTACAATCTCTCGAACCGT
CTGCATGCGACTCATCCGTGTTAACGTCGCATGAAACTTAGCGGAAATTACTCTTGGAATAGGGTTATTTGGAGC
GTGTTACAACCTCAATTCGGTTCTGTCACTTCAGAGGGTTTGGGCCTTCCCCTGGTCCGCTAGTACAGGCGACTA
CGGCGTAACGGTAAGTTTTATTTTCTTTCACGAAATGTTGGTTAATATCACTGAATCCTTTGAATTCCTGTTGGC
GCATTCCGGTGTCTGTATTCTTGTTCCAGATTAACGGAATCGAGCATCCAGCCCACGGCTTGTCCGGGATTTCAG
TGGAGGAGGGTTAGGTGAACCCTTGCATTTTTCTTCCAGCACTTACCATTGCGACTGCGGACGACTTCCAGCGCC
CACGCAAACATCGACGTATCTTCAAGCACCAACCATGCGTAATCAGGGAAGAAATAGGCGGTCCCGTAACCACAA
GGAGGTCAATGACACCCAGCTCAACATCCCTCGTGATGACCCGCAGGTTCAGTCGTATTCGCGACATCAACATCC
GTCTCACTACAGCGACGCCCATCGATTACCGTCCACGATGCCCAGTAGGTCTACGTATGAAGTGGGAAGGGACAG
GAATGTAGCCCCAGGTCGAAGTTTGCGTGAGGGTGACTGGGGCACAAGCGGGAGTCACGACCGTTACGGCTACGA
CCTATACCCCCCTGAACATGACGCTTACGACGATCCATTAAGGAGGGATGCTGGTGCTTGGGGAGGGGGCAATGA
CGGTTACTCGTCTCGCGGAGGTTGGTCTCACTCATATCATCATCCTGAACCGTCCACGTCGTATCAGGATTCGTC
AAATTGGAAACCAACCTCCCCAACAGCCCACCACTACGGCAGCAGCTCGCACTACAAGCCTCCCGTTGACCCATA
CATGGAACCCAATCCGTATCTGCCTCGAAGCCCAACCCATTTTACAGAACGAAGTCCGCTCGGCTACGACGACCC
TCAAAGCTACTATTACGAACAATGGCGTGGGCGAGACCCACGGCCGAGTCCTTCCGACGAGAAAATGGATTACAA
CCAAATCGACAAACGAGGGGCTCAGGGATGGAGGAGGAGCAGCGGTGGGGGTAAGGGTGGGCAACCCAAGTTCCA
GAGCGACTCTGGTTGGTCAGGGCGGAAGAAGAGCAAAGAATGGGGCAATTCCAATCAACAGCGCTACGATGAGAA
GCAACCTGAACCACTCTATTCGAGCGTAGAAGACAGGTCATGGGAGCCAGCGGATTCATGGAAATCCTCCAACCG
CCACGAGGGCGGCGCCAGTACCTCCAAGCATCAGCAGCACCACACTCCTGGTCGCCCGGGCACACAACAGCAGTC
AAAATCATCACGCAAAGAGAAAAAATCGGGCAAGCAAAAGAAGGAATGGAAAAACGAAGACTTGAATCTTAACAA
GTAATTTTCCCGACCTGTGACTCCAAGATGTAGGCGCTGACTTTTTGCAGCTGGACACGCAGGGACCATTTGGCC
TCGAAAAAGAACCAAGACAAGTCACAAGGTTCGGGTTCAAGGAAGAAACATCGCCGGTCTCGCTCAAGGTCCCGG
TCGCGAGACTCTTTGCGCTCGCACCATTCATCCTACCGCTCGAGGTCCTCCTCTCCCGTGGCAAAGCGAAGGCGG
AGAGGATCCAGCCCAATGCTTCGCAGTAGGTCTCCGGAAGGGGATCAAATGGGCTGGCTACCACCACGAGATGAG
GATAGAATGGTCTCGCGATCGCCCTCACCTGGATATCGAAGGAGGTCCCCGTCGACATCAGATCGATCTAGCCAC
CGTAGTCGAAGCCCCAGCCCCTATGAGCGACCCCGAGCAGTTCATCGCCTCCCGACGGCCAATTCGAGCGCGTTG
CACACGGCACCTGCGACGGGGAAATCCAAAAAAGCTGGAAAACAGCGAAACGGGCACAAAAATGCTCGAGGTTCG
GTGAGTAAATGCCGTACTTCAAAGAGGGCCCGGCCTTATTCCTGGGTTTACAATAGACTGGCAAGCAGCCCGCAA
GGTATCCCGAAGACGATGTTGCCGCAGACTCCCTTTCCATGCCTCCTCCACCGCCGCCTTCTCGGCCAAAGCAAT
CGCGGCAGCAAACTCCCGACTGGAGAGACGAACACACTCCACTTCTTAATCCAAACCCCAACGGACTTCCTCCCA
AGCCCATATCGCTTCCAGAGAAACCCACCCGGATTGTCCCCCAAAGGAATGCGGGCTTCAAACCTATCGGGCAGT
CCAACTCTGCCTTGAAAATGTTTTTCCCTGGGGACGAGGACGAGGCGGATTATATTTCCAGTAGCAATCTTACAA
AGGACGCTCGCACCGAGCCGACCCCAACAAAGGGCTTCACTCGCCAAACTCTACTGGACGATACTCGCAACGGCC
GTGAGGCAGAGAATCCACATCAATACGGGAATGACCCGCCTCCCATATCCCGCCCACCAGCAAGTTGGGACCCTT
ATGCAAGCACATACCCAGTGGATCCAAGGGTACCAACTCAGTCATACACCAACGGTTTAACACCACATCTCCCAG
AACCCCCTCCTCATATCCCTCACCGGACTGGGCAAACGCAGTCTTACTGGAAATCTCCGGCCGTCTCTCCACCTC
CAGAGTCTGACGCTTCAAGATGGAGTGGAGTGCCTGTTCCTCCGGTGCACCCCAACTTGCCCCCAACATACACGG
CAAGCGTGCCTCCTCGACCTGGTTATGAATTGCCGTACCGACCACCAGTTCCTGTGGACAACGCACCGGTTTCCC
ATACAACTAAAAGCACTCCTCAGCCCTCTCCGATACCAATATCAGATCCTTCACCGGCTTGGCAAGCTTCCGCCT
CTGCTTCTGGGGTAGCTACTCCTGTCGCCCCTGAGCAGCCAGAAAGCAAAGATCTCTATGTTATCCTAAACCAGG
TTGGAGAAGGAACGTTCGGAAAGGTCTATAAAGCCCGCAACACGGTTGCCAAAGTCCATGTCGCACTCAAACGCA
TTCGAATGGAGACCGAGCGAGACGGCTTCCCTGTGACCGCCATGCGGGAAATCAAACTCCTCCAGTCCTTGAAAC
ATCCTAACGTCGTTCAGCTCTACGAAATGATGGTGTCAAATGGTAGGACGAATTTGTGTTCTCAATTTGAAGAAG
AGTCTGACCTAAATGTGCAGGATCTGTATTCATGGTTTTCGAGTACATGGATCATGACCTTACAGGGATTCTGTC
GCAGACGCAGTTCAAATTTTCAGACTCGCACCTCAAATCCCTTTGTCACCAGATGCTCGCAGGGCTTGCGTATCT
CCATCACAAGGGTGTCATTCACCGCGACATCAAAGGCTCGAACATTCTCCTGAACAACCGCGGTGAATTGAAGCT
GGCCGACTTTGGCTTAGCCCGTTTCTATCAGAAGCGTCGGCGCACAGACTACACCAACCGAGTTATCACCCTTTG
GTACCGACCCCCCGAGCTTCTCTTTGGAGCAACAGTATATGGACCTGAAGTCGATATGTGGAGTGCTGGGTGAGT
CCCCATCGATATGCTCTTGAATTCGCACCCCTGACCTGGACCAGTTGCATCATGTTGGAGCTATTCACGAAGAAG
CCCGTTTTCCAAGGGAACGACGAAATCAACCAGCTTCATGTTATCTTCAAGATACTCGGTACACCAACGACGGAA
AGATGGACTGGGCTGAACAACCTTCCCTGGTTTGAACTTATCAAACCGAAAGAATCTTTACCCAACCGCTTCAGA
GACCTCTTCCAAAAGTGAGATACCCCAAACTGCAATTCCCGCTCGAGGCTAACCCATCATGTCACTTTGTAGATG
GATGTCTCCGGCAGCGTTGGATCTGGCTGAACGGCTGTTGACATATGATCCCGAACTTCGTGTCTCCGCTCAAGA
AGCAATGGAAGCTCCTTATTTCACTCAGGAACGACCATTTGCAGAAAGGCCAGCAGGGTACGTCTTCCTGTCTCT
CTTGTAAATTGTTCTTCACTCAGCATTACTTTACAGCCTTGCTTCGCTAGATGGAGAATGGCACGAGCTGGAAAC
CAAGCAGGAACGCTTAAAGAAGCGCAAAAAGACTGAAAGTACAGCCTAACGATGGCTGGAGCAATTTTTTTTCAC
CTCCTTAGTAGCTACCTTGGTGTTTTCTTACATGCCGGACCATCTCACTTTCCATTTGTATCATTATTGCTTTCC
TTTAATTATATTATGCCGCGTTGTCTCCGTACAATGCAAGTGATATGCCA
Length 4325