Systematic name | CopciAB_358799 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 358799 |
Uniprot id | Functional description | Protein tyrosine kinase | |
Location | scaffold_3:1472041..1474514 | Strand | - |
Gene length (nt) | 2474 | Transcript length (nt) | 2091 |
CDS length (nt) | 1575 | Protein length (aa) | 524 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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0 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_358799.T0 |
Description | Protein tyrosine kinase |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | IPR001245 | 326 | 522 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
IPR000719 | Protein kinase domain |
IPR011009 | Protein kinase-like domain superfamily |
IPR008271 | Serine/threonine-protein kinase, active site |
Go id | Term | Ontology |
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GO:0004672 | protein kinase activity | MF |
GO:0006468 | protein phosphorylation | BP |
GO:0005524 | ATP binding | MF |
KEGG Orthology |
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K05705 |
K17535 |
COG category | Description |
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T | Protein tyrosine kinase |
Class | Family | Subfamily |
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No records |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_358799.
Sequence id | CopciAB_358799.T0 |
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Sequence |
>CopciAB_358799.T0 MTSAFLPSSRPPLPHQRQTQFEETLWQLLQPNSTQTMLRMITLIDLLNDHGPKDVHLEGRMIVLTRVKDAPLSYR QGWAESSAALHITKAWLGAALSHAKFRSCLLAMLQFLESLPFTARMARDRDFVELLDQIQSLPLSEEESTIYNRL MSPSARHDTSPPQGPVHDSRERVYDVKSVALGNNSVSKDSTVQADEEMISSNESEITADDIFSQFRVDDIAIYLE TTMRMLRAPQSGWSEADCAYMIHSIFQKALDTRESYQYMLSLTGNDAQLVLDALHFLLAYTPSLPPPDRRQILKA LQRLSNRSQLYPACLALTNVEREPHPIASGHFGEVYKGYFEGKVVALKLIKMYERTKASVITKAVLHEVVIWCQL VHRNVLPFLGIHESEEGWISLVSPWMRHGSLPRYLSQKPNANRLLLISDVASGLAYLHEHGVVHGDLKGVNILVS PSGHACLADFGLAKIADNEIISWTSIRTSSTQGGGTIRWQAPELHDPNDDVTPKATPESDVYSFACVCYEVAMS |
Length | 524 |
Sequence id | CopciAB_358799.T0 |
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Sequence |
>CopciAB_358799.T0 ATGACCTCGGCTTTCCTCCCTAGCTCACGACCTCCTCTTCCTCACCAACGGCAGACACAGTTTGAAGAGACATTA TGGCAACTACTTCAACCAAACTCTACTCAGACAATGCTTCGAATGATCACTCTAATCGACTTGCTGAATGACCAT GGTCCCAAAGACGTCCACTTAGAAGGCCGAATGATTGTTTTGACGCGAGTCAAGGATGCACCATTATCGTATCGC CAGGGGTGGGCGGAATCCAGTGCCGCGCTTCATATCACTAAAGCTTGGCTGGGAGCTGCGCTATCTCATGCAAAG TTTCGCTCGTGTCTGCTAGCAATGCTCCAGTTTCTCGAGTCTCTTCCATTTACAGCGCGAATGGCAAGAGACCGC GACTTCGTGGAACTTTTGGATCAAATACAATCTCTTCCTCTATCTGAAGAGGAATCTACAATCTATAATCGATTG ATGTCTCCATCTGCCAGGCATGACACCAGTCCTCCTCAGGGCCCTGTTCATGACTCTCGGGAACGGGTATACGAC GTCAAGTCCGTAGCGCTAGGCAACAATTCGGTTTCAAAGGACTCGACGGTGCAAGCAGACGAGGAAATGATTTCA TCCAATGAATCGGAAATAACTGCGGACGATATCTTTTCCCAGTTTCGAGTGGACGACATTGCCATTTATCTCGAA ACCACAATGAGGATGCTCAGAGCACCTCAGTCGGGCTGGTCGGAGGCCGACTGCGCTTATATGATTCATTCAATC TTCCAAAAGGCGTTGGATACGCGAGAGTCGTATCAGTACATGCTCTCACTGACGGGGAATGACGCACAGTTGGTT CTCGACGCTCTCCATTTTTTACTTGCATACACCCCGTCCCTTCCTCCACCAGACAGGCGCCAGATACTCAAAGCG CTGCAGCGACTGTCAAATAGGTCTCAACTGTACCCAGCATGCTTGGCCCTGACTAACGTCGAACGAGAGCCTCAC CCCATCGCTTCGGGGCATTTTGGGGAAGTATACAAAGGCTATTTCGAAGGCAAGGTCGTTGCGTTGAAGTTGATA AAAATGTATGAGAGAACCAAGGCCTCCGTAATAACGAAGGCGGTCTTGCATGAAGTGGTCATCTGGTGCCAGCTG GTACATCGAAATGTCCTGCCTTTTCTTGGTATTCACGAGTCTGAGGAGGGGTGGATATCGCTTGTATCTCCTTGG ATGCGACATGGGAGTCTTCCAAGGTACCTTTCTCAGAAACCAAATGCCAACAGGCTGCTCCTGATATCTGATGTT GCGTCCGGTCTGGCTTATCTCCATGAACACGGTGTCGTCCACGGGGATCTCAAAGGAGTCAATATATTGGTTTCG CCCTCGGGTCACGCCTGTCTAGCAGATTTCGGTTTGGCCAAAATCGCAGACAATGAAATCATTTCATGGACCTCG ATCCGTACTTCCTCGACACAAGGGGGCGGCACGATCCGGTGGCAGGCGCCAGAGCTCCATGACCCTAATGACGAT GTCACCCCGAAGGCCACTCCAGAATCTGACGTCTACTCGTTTGCTTGTGTCTGCTATGAGGTAGCGATGTCATGA |
Length | 1575 |
Sequence id | CopciAB_358799.T0 |
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Sequence |
>CopciAB_358799.T0 GGGTTTGCACCTCACTCTGAAGAGGACCTATGACCTCGGCTTTCCTCCCTAGCTCACGACCTCCTCTTCCTCACC AACGGCAGACACAGTTTGAAGAGACATTATGGCAACTACTTCAACCAAACTCTACTCAGACAATGCTTCGAATGA TCACTCTAATCGACTTGCTGAATGACCATGGTCCCAAAGACGTCCACTTAGAAGGCCGAATGATTGTTTTGACGC GAGTCAAGGATGCACCATTATCGTATCGCCAGGGGTGGGCGGAATCCAGTGCCGCGCTTCATATCACTAAAGCTT GGCTGGGAGCTGCGCTATCTCATGCAAAGTTTCGCTCGTGTCTGCTAGCAATGCTCCAGTTTCTCGAGTCTCTTC CATTTACAGCGCGAATGGCAAGAGACCGCGACTTCGTGGAACTTTTGGATCAAATACAATCTCTTCCTCTATCTG AAGAGGAATCTACAATCTATAATCGATTGATGTCTCCATCTGCCAGGCATGACACCAGTCCTCCTCAGGGCCCTG TTCATGACTCTCGGGAACGGGTATACGACGTCAAGTCCGTAGCGCTAGGCAACAATTCGGTTTCAAAGGACTCGA CGGTGCAAGCAGACGAGGAAATGATTTCATCCAATGAATCGGAAATAACTGCGGACGATATCTTTTCCCAGTTTC GAGTGGACGACATTGCCATTTATCTCGAAACCACAATGAGGATGCTCAGAGCACCTCAGTCGGGCTGGTCGGAGG CCGACTGCGCTTATATGATTCATTCAATCTTCCAAAAGGCGTTGGATACGCGAGAGTCGTATCAGTACATGCTCT CACTGACGGGGAATGACGCACAGTTGGTTCTCGACGCTCTCCATTTTTTACTTGCATACACCCCGTCCCTTCCTC CACCAGACAGGCGCCAGATACTCAAAGCGCTGCAGCGACTGTCAAATAGGTCTCAACTGTACCCAGCATGCTTGG CCCTGACTAACGTCGAACGAGAGCCTCACCCCATCGCTTCGGGGCATTTTGGGGAAGTATACAAAGGCTATTTCG AAGGCAAGGTCGTTGCGTTGAAGTTGATAAAAATGTATGAGAGAACCAAGGCCTCCGTAATAACGAAGGCGGTCT TGCATGAAGTGGTCATCTGGTGCCAGCTGGTACATCGAAATGTCCTGCCTTTTCTTGGTATTCACGAGTCTGAGG AGGGGTGGATATCGCTTGTATCTCCTTGGATGCGACATGGGAGTCTTCCAAGGTACCTTTCTCAGAAACCAAATG CCAACAGGCTGCTCCTGATATCTGATGTTGCGTCCGGTCTGGCTTATCTCCATGAACACGGTGTCGTCCACGGGG ATCTCAAAGGAGTCAATATATTGGTTTCGCCCTCGGGTCACGCCTGTCTAGCAGATTTCGGTTTGGCCAAAATCG CAGACAATGAAATCATTTCATGGACCTCGATCCGTACTTCCTCGACACAAGGGGGCGGCACGATCCGGTGGCAGG CGCCAGAGCTCCATGACCCTAATGACGATGTCACCCCGAAGGCCACTCCAGAATCTGACGTCTACTCGTTTGCTT GTGTCTGCTATGAGGTAGCGATGTCATGACATCTAGACTTCCATTCTACGAATTTCCCAGAGACTCAACCGTCAT TATGAAGATCATGCAGGGACACCGACCTAGCAAACCTGCTGACAGTGATTTGCCGTGGTTCGAGGCTGATGTGAT CCGTGAGTTGTGGAGACTTGTCGAGGAATGCTGGCAACAAAACCCTTCATTGCGACCGGGAGCCAGTGACATTGT CCAGCGAGATATTATACGCGTTGACGCCGACACCCGCACCGAGCATAGTTGGGAATGATCATAACGGTACAAACT ACGACAACGCATTGGTTCCCACTTGAAGCCACCTGCCTGTTTAGTTAATCCAATTGCGGTTTTTAGCGATCTCGA AGTAGCTTCATCGCGCCACTTGTTAGTGGAGTTATCAGGGCTCCTCATGGCCCACAACTGTTGTTCTAGAGATAC ATAGGAGCTTCTAGTAGCCCAATAGTAGTACTGTGACGAATATAAAGTGTGGCAACCGTGTCCTTC |
Length | 2091 |
Sequence id | CopciAB_358799.T0 |
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Sequence |
>CopciAB_358799.T0 GGGTTTGCACCTCACTCTGAAGAGGACCTATGACCTCGGCTTTCCTCCCTAGCTCACGACCTCCTCTTCCTCACC AACGGCAGACACAGTTTGAAGAGACATTATGGCAACTACTTCAACCAAACTCTACTCAGACAATGCTTCGAATGA TCACTCTAATCGACTTGCTGAATGACCATGGTCCCAAAGACGTCCACTTAGAAGGCCGAATGATTGTTTTGACGC GAGTCAAGGATGCACCATTATCGTATCGCCAGGGGTGGGCGGAATCCAGTGCCGCGCTTCATATCACTAAAGCTT GGCTGGGAGCTGCGCTATCTCATGCAAAGTTTCGCTCGTGTCTGCTAGCAATGCTCCAGGTTCGATGCATCATCT CTCCCCTTGCCAGCGCTCGCTGATCTTCTTTCGGCGAAAGTTTCTCGAGTCTCTTCCATTTACAGCGCGAATGGC AAGAGACCGCGACTTCGTGGAACTTTTGGATCAAATACAATCTCTTCCTCTATCTGAAGGTCAGGCAATCAATTG TTGCCTCACTGAGTCAACAAGAGATTAAAGATGTCCTAGAGGAATCTACAATCTATAATCGATTGATGTCTCCAT CTGCCAGGCATGACACCAGTCCTCCTCAGGGCCCTGTTCATGACTCTCGGGAACGGGTATACGACGTCAAGTCCG TAGCGCTAGGCAACAATTCGGTTTCAAAGGACTCGACGGTGCAAGCAGACGAGGAAATGATTTCATCCAATGAAT CGGAAATAACTGCGGACGATATCTTTTCCCAGTTTCGAGTGGACGACATTGCCATTTATCTCGAAACCACAATGA GGATGCTCAGAGCACCTCAGTCGGGCTGGTCGGAGGCCGACTGCGCTTATATGATTCATTCAATCTTCCAAAAGG CGTTGGATACGCGAGAGTCGTATCAGTACATGCTCTCACTGACGGGGAATGACGCACAGTTGGTTCTCGACGCTC TCCATTTTGTGAGTACTTGGAAATCCCCTGTCGACATTCTCTCAGTTATATCATCTAGTTACTTGCATACACCCC GTCCCTTCCTCCACCAGACAGGCGCCAGATACTCAAAGCGCTGCAGCGACTGTCAAATAGGTCTCAACTGTACCC AGCATGCTTGGCCCTGACTAACGTCGAACGAGAGCCTCACCCCATCGCTTCGGGGCATTTTGGGGAAGTATACAA AGGCTATTTCGAAGGCAAGGTCGTTGCGTTGAAGTTGATAAAAATGTATGAGAGAACCAAGGCCTCCGTAATAAC GAAGGTTGGTGATAGCATTTTCGAGAGTCTTCGTCTGGGTGCCTATCCACTAAAATCCGACGACTAGGCGGTCTT GCATGAAGTGGTCATCTGGTGCCAGCTGGTACATCGAAATGTCCTGCCTTTTCTTGGTATTCACGAGTCTGAGGA GGGGTGGATATCGCTTGTATCTCCTTGGATGCGACATGGGAGTCTTCCAAGGTACCTTTCTCAGAAACCAAATGC CAACAGGCTGCTCCTGGTCCGTCGATCTCACCCTTCTCACGACTCAAACCTGACTTATTGCTAGATATCTGATGT TGCGTCCGGTCTGGCTTATCTCCATGAACACGGTGTCGTCCACGGGGATCTCAAAGGAGTGAGCGAGTGGAACCT TCCCAACCGTTGCTAGTTCTGATGTGTCTCTATCAACCTAGGTCAATATATTGGTTTCGCCCTCGGGTCACGCCT GTCTAGCAGATTTCGGTTTGGCCAAAATCGCAGACAATGAAATCATTTCATGGACCTCGATCCGTACTTCCTCGA CACAAGGGGGCGGCACGATCCGGTGGCAGGCGCCAGAGCTCCATGACCCTAATGACGATGTCACCCCGAAGGCCA CTCCAGAATCTGACGTCTACTCGTTTGCTTGTGTCTGCTATGAGGTAGCGATGTACATACAGTTCGTCAAAATAG GCCCCCAGTTTCTGATTGAATATTTTGCAGGTCATGACATCTAGACTTCCATTCTACGAATTTCCCAGAGACTCA ACCGTCATTATGAAGATCATGCAGGGACACCGACCTAGCAAACCTGCTGACAGTGATTTGCCGTGGTTCGAGGCT GATGTGATCCGTGAGTTGTGGAGACTTGTCGAGGAATGCTGGCAACAAAACCCTTCATTGCGACCGGGAGCCAGT GACATTGTCCAGCGAGATATTATACGCGTTGACGCCGACACCCGCACCGAGCATAGTTGGGAATGATCATAACGG TACAAACTACGACAACGCATTGGTTCCCACTTGAAGCCACCTGCCTGTTTAGTTAATCCAATTGCGGTTTTTAGC GATCTCGAAGTAGCTTCATCGCGCCACTTGTTAGTGGAGTTATCAGGGCTCCTCATGGCCCACAACTGTTGTTCT AGAGATACATAGGAGCTTCTAGTAGCCCAATAGTAGTACTGTGACGAATATAAAGTGTGGCAACCGTGTCCTTC |
Length | 2474 |