Systematic name | CopciAB_361063 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | PKA4 | Synonyms | 361063 |
Uniprot id | Functional description | Extension to Ser/Thr-type protein kinases | |
Location | scaffold_2:2182849..2185286 | Strand | + |
Gene length (nt) | 2438 | Transcript length (nt) | 2275 |
CDS length (nt) | 1374 | Protein length (aa) | 457 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Agrocybe aegerita | Agrae_CAA7267935 | 73.2 | 2.004E-221 | 684 |
Lentinula edodes B17 | Lened_B_1_1_11778 | 68.4 | 1.274E-205 | 638 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_11004 | 68.4 | 1.598E-205 | 638 |
Flammulina velutipes | Flave_chr09AA00133 | 72.2 | 7.319E-205 | 636 |
Lentinula edodes NBRC 111202 | Lenedo1_1039442 | 83.7 | 4.263E-203 | 631 |
Pleurotus ostreatus PC9 | PleosPC9_1_114122 | 66.3 | 4.655E-200 | 622 |
Schizophyllum commune H4-8 | Schco3_2484274 | 71.1 | 6.878E-199 | 619 |
Pleurotus ostreatus PC15 | PleosPC15_2_19948 | 80.8 | 7.375E-195 | 607 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_154065 | 64.1 | 1.752E-194 | 606 |
Pleurotus eryngii ATCC 90797 | Pleery1_1380818 | 80.8 | 1.924E-194 | 606 |
Grifola frondosa | Grifr_OBZ75731 | 80.7 | 1.333E-188 | 589 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_64256 | 72.4 | 1.258E-177 | 557 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_34901 | 72.4 | 1.31E-177 | 557 |
Auricularia subglabra | Aurde3_1_1325074 | 70.2 | 6.804E-157 | 498 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | PKA4 |
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Protein id | CopciAB_361063.T0 |
Description | Extension to Ser/Thr-type protein kinases |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
---|---|---|---|---|---|
CDD | cd05580 | STKc_PKA_like | - | 131 | 423 |
Pfam | PF00069 | Protein kinase domain | IPR000719 | 134 | 393 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR000719 | Protein kinase domain |
IPR011009 | Protein kinase-like domain superfamily |
IPR008271 | Serine/threonine-protein kinase, active site |
IPR017441 | Protein kinase, ATP binding site |
IPR000961 | AGC-kinase, C-terminal |
Go id | Term | Ontology |
---|---|---|
GO:0004672 | protein kinase activity | MF |
GO:0005524 | ATP binding | MF |
GO:0006468 | protein phosphorylation | BP |
GO:0004674 | protein serine/threonine kinase activity | MF |
KEGG Orthology |
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K04345 |
K08282 |
K19584 |
COG category | Description |
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T | Extension to Ser/Thr-type protein kinases |
Class | Family | Subfamily |
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No records |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_361063.
Sequence id | CopciAB_361063.T0 |
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Sequence |
>CopciAB_361063.T0 MSFQHHPTSLSMPAEPVRRISITYQQPSCPESQVVVTEAPITPPLSPKSIATKSGAMPVEEMPICSSKPIQIHSE QEAMDVESAPVHQHPNTMPGEQQAQSQDQSNESQNRPQRCLEDQRVRLQGSGLKLSDFEVRGTLGTGTFGKVLLV RHKTARDRHGAQSHFAMKVLRKTVIVQLRQVEHVNAERYILSRVNHPFIVDLFATFQDSLNVYMLMSYVPGGELF THLRRAQRFTPDVTRFYLATIILALKYLHSFNIIYRDLKPENLLLDSRGYLRLTDFGFAKIVDDRTWTLCGTPEY LAPEIIQSDGHGKAADWWACGVLCYEMLVGYPPFFDESPYGIYEKILNGQIHWPRHIDRLSKDLIKSFLNPDRTK RLGNMLGGPQDILDHPWFRGVDWDALERREINAPIIPRTTSVDDTRHFLHLPPPTAEEIPGLVGQDLPQPRFDPI NYHFLEF |
Length | 457 |
Sequence id | CopciAB_361063.T0 |
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Sequence |
>CopciAB_361063.T0 ATGTCCTTCCAGCATCACCCAACATCGTTATCAATGCCCGCTGAACCCGTTCGGCGGATATCGATTACATACCAG CAGCCTTCGTGTCCAGAATCGCAGGTCGTAGTCACTGAGGCCCCCATAACTCCTCCCCTTTCTCCCAAGTCCATC GCCACAAAGTCGGGCGCTATGCCCGTGGAAGAAATGCCCATCTGCAGTTCGAAACCTATTCAAATACACTCCGAA CAGGAGGCGATGGACGTCGAGTCGGCGCCCGTTCACCAACATCCGAATACCATGCCAGGCGAACAACAAGCCCAG TCCCAAGATCAGTCTAACGAATCGCAGAACCGCCCACAACGGTGTCTTGAAGACCAGCGTGTTCGGTTGCAGGGT TCTGGTTTGAAGCTGTCCGATTTTGAGGTCAGGGGAACACTTGGCACCGGGACGTTTGGGAAGGTACTCTTGGTG CGCCATAAGACCGCTCGAGACCGACATGGAGCGCAAAGTCATTTTGCGATGAAAGTGCTTCGCAAAACGGTGATC GTGCAACTGCGACAAGTCGAGCACGTCAATGCGGAACGATATATCCTCTCGAGGGTGAACCATCCATTCATCGTG GACCTCTTTGCGACCTTCCAGGACAGTCTCAACGTCTATATGCTCATGTCCTATGTCCCTGGGGGTGAACTTTTC ACCCATCTGCGACGCGCACAGCGGTTCACTCCTGACGTTACCCGATTCTACCTTGCCACGATTATCCTCGCCCTC AAGTACCTCCACTCGTTCAACATCATCTACCGCGACTTGAAGCCCGAAAACCTTCTGTTGGATTCTCGGGGTTAT CTCCGACTCACAGACTTTGGCTTCGCGAAAATTGTCGACGACCGAACTTGGACTCTGTGTGGCACCCCAGAATAC CTTGCCCCAGAGATTATCCAATCCGACGGTCACGGCAAGGCCGCGGATTGGTGGGCATGTGGGGTGTTGTGCTAC GAGATGCTGGTTGGATATCCGCCCTTCTTCGACGAATCTCCGTACGGCATTTACGAAAAGATTCTGAACGGCCAA ATCCACTGGCCGCGGCACATTGATCGTCTTTCAAAAGACTTGATCAAGTCGTTCCTCAACCCAGATCGCACCAAG CGACTGGGTAACATGCTGGGAGGCCCCCAGGATATCCTTGACCATCCCTGGTTTAGAGGTGTTGATTGGGATGCA TTGGAAAGGCGTGAAATCAACGCTCCCATTATCCCAAGGACGACATCGGTCGACGATACCCGCCACTTCTTGCAT CTCCCTCCTCCTACCGCTGAGGAAATCCCCGGCCTTGTTGGGCAAGATCTCCCTCAGCCACGCTTTGACCCGATC AATTACCACTTCCTCGAGTTTTAA |
Length | 1374 |
Sequence id | CopciAB_361063.T0 |
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Sequence |
>CopciAB_361063.T0 GCCCTTTGCTTCCTCACCACCACCACCTCACTCCAAATCCGCCCCCTACACTTCGCCGTCTTCAACGACGACGTC CTCTTTCCCTGCCATTTCGCAGGCTTTTCTCGCTTCTCCTCAATAAATTCTCCACCTTCCTTTATTTTATTTCTC TTCTTTTCTCTTCTTCTCCTCACTCGTTGCTCGAGCTGCGGTAGGAGCCCAACATCTCAGCCCCCACCCCACCCA ACATAAATACCAGTCGCCATTAGAACCTTTAGCGGCCGTTGCGCACATCTTCCCTTATTCCCGGTCCCAAATGTC CTTCCAGCATCACCCAACATCGTTATCAATGCCCGCTGAACCCGTTCGGCGGATATCGATTACATACCAGCAGCC TTCGTGTCCAGAATCGCAGGTCGTAGTCACTGAGGCCCCCATAACTCCTCCCCTTTCTCCCAAGTCCATCGCCAC AAAGTCGGGCGCTATGCCCGTGGAAGAAATGCCCATCTGCAGTTCGAAACCTATTCAAATACACTCCGAACAGGA GGCGATGGACGTCGAGTCGGCGCCCGTTCACCAACATCCGAATACCATGCCAGGCGAACAACAAGCCCAGTCCCA AGATCAGTCTAACGAATCGCAGAACCGCCCACAACGGTGTCTTGAAGACCAGCGTGTTCGGTTGCAGGGTTCTGG TTTGAAGCTGTCCGATTTTGAGGTCAGGGGAACACTTGGCACCGGGACGTTTGGGAAGGTACTCTTGGTGCGCCA TAAGACCGCTCGAGACCGACATGGAGCGCAAAGTCATTTTGCGATGAAAGTGCTTCGCAAAACGGTGATCGTGCA ACTGCGACAAGTCGAGCACGTCAATGCGGAACGATATATCCTCTCGAGGGTGAACCATCCATTCATCGTGGACCT CTTTGCGACCTTCCAGGACAGTCTCAACGTCTATATGCTCATGTCCTATGTCCCTGGGGGTGAACTTTTCACCCA TCTGCGACGCGCACAGCGGTTCACTCCTGACGTTACCCGATTCTACCTTGCCACGATTATCCTCGCCCTCAAGTA CCTCCACTCGTTCAACATCATCTACCGCGACTTGAAGCCCGAAAACCTTCTGTTGGATTCTCGGGGTTATCTCCG ACTCACAGACTTTGGCTTCGCGAAAATTGTCGACGACCGAACTTGGACTCTGTGTGGCACCCCAGAATACCTTGC CCCAGAGATTATCCAATCCGACGGTCACGGCAAGGCCGCGGATTGGTGGGCATGTGGGGTGTTGTGCTACGAGAT GCTGGTTGGATATCCGCCCTTCTTCGACGAATCTCCGTACGGCATTTACGAAAAGATTCTGAACGGCCAAATCCA CTGGCCGCGGCACATTGATCGTCTTTCAAAAGACTTGATCAAGTCGTTCCTCAACCCAGATCGCACCAAGCGACT GGGTAACATGCTGGGAGGCCCCCAGGATATCCTTGACCATCCCTGGTTTAGAGGTGTTGATTGGGATGCATTGGA AAGGCGTGAAATCAACGCTCCCATTATCCCAAGGACGACATCGGTCGACGATACCCGCCACTTCTTGCATCTCCC TCCTCCTACCGCTGAGGAAATCCCCGGCCTTGTTGGGCAAGATCTCCCTCAGCCACGCTTTGACCCGATCAATTA CCACTTCCTCGAGTTTTAAGTTCTCGGGTCACCCTTTTCCTTGCTCTTTTCGACCATCTCTGAATGGATCCCACG CTCTTTCGCCTTTCCCAGTCTCCACTCTTTAATCCATCTTCTGAATCACTTTATTACGCGCCTCGGTTCAGCCTT ATCCCTATTTATTGCATTCGCATCTTCGTTCGTATCTTACCCTGCAGCATCTGGAATCCCCTATTTCTGTCTCGA AAACTGTATCCAATTCTGCCTCTCTCTTTGGTGGCTATTCTTATCTTGGTGCCACATCCCACTGTATTTTTCGCC TCCCAATCTTGCGTATGCTCTCTGTATTGCCCATTCCATTCCTTTTGTGATTTGCGGCAGTAGAACATAGTTGTT TCTCTCTGCTTTCGATGTCCTGTAGCCTTTCACTTTTTCTTGCATGTTGTTCTCTACAACACCCACCCTATGTAG CCTTGTCATCTACTCGTCACATCCTCTGGATGTTTGACTGCTGTGTATTTTTGCCATCCATATACCACTTTCGAG TCTCGTATTTCCGTCGCTGTTAGGTGTGCGACGTAATCATATATCCCCTATATTACTTGATACTTGACCTTCGCT TTTATCAATGCTACTATTTGGCTTG |
Length | 2275 |
Sequence id | CopciAB_361063.T0 |
---|---|
Sequence |
>CopciAB_361063.T0 GCCCTTTGCTTCCTCACCACCACCACCTCACTCCAAATCCGCCCCCTACACTTCGCCGTCTTCAACGACGACGTC CTCTTTCCCTGCCATTTCGCAGGCTTTTCTGTAAGTCATTTGCGCATCGCGACCACGAGCGCTTTGTTGATCAAA CAATAGCGCTTCTCCTCAATAAATTCTCCACCTTCCTTTATTTTATTTCTCTTCTTTTCTCTTCTTCTCCTCACT CGTTGCTCGAGCTGCGGTAGGAGCCCAACATCTCAGCCCCCACCCCACCCAACATAAATACCAGTCGCCATTAGA ACCTTTAGCGGCCGTTGCGCACATCTTCCCTTATTCCCGGTCCCAAATGTCCTTCCAGCATCACCCAACATCGTT ATCAATGCCCGCTGAACCCGTTCGGCGGATATCGATTACATACCAGCAGCCTTCGTGTCCAGAATCGCAGGTCGT AGTCACTGAGGCCCCCATAACTCCTCCCCTTTCTCCCAAGTCCATCGCCACAAAGTCGGGCGCTATGCCCGTGGA AGAAATGCCCATCTGCAGTTCGAAACCTATTCAAATACACTCCGAACAGGAGGCGATGGACGTCGAGTCGGCGCC CGTTCACCAACATCCGAATACCATGCCAGGCGAACAACAAGCCCAGTCCCAAGATCAGTCTAACGAATCGCAGAA CCGCCCACAACGGTGTCTTGAAGACCAGCGTGTTCGGTTGCAGGGTTCTGGTTTGAAGCTGTCCGATTTTGAGGT CAGGGGAACACTTGGTAAGTTCATTTTTGGTTTTCGTCCCATAATTCCCAGCTCACAAGAGGGTACTTCATATAG GCACCGGGACGTTTGGGAAGGTACTCTTGGTGCGCCATAAGACCGCTCGAGACCGACATGGAGCGCAAAGTCATT TTGCGATGAAAGTGCTTCGCAAAACGGTGATCGTGCAACTGCGACAAGTCGAGCACGTCAATGCGGAACGATATA TCCTCTCGAGGGTGAACCATCCATTCATCGTGGACCTCTTTGCGACCTTCCAGGACAGTCTCAACGTCTATATGC TCATGTCCTATGTCCCTGGGGGTGAACTTTTCACCCATCTGCGACGCGCACAGCGGTTCACTCCTGACGTTACCC GATTCTACCTTGCCACGATTATCCTCGCCCTCAAGTACCTCCACTCGTTCAACATCATCTACCGCGACTTGAAGC CCGAAAACCTTCTGTTGGATTCTCGGGGTTATCTCCGACTCACAGACTTTGGCTTCGCGAAAATTGTCGACGACC GAACTTGGACTCTGTGTGGCACCCCAGAATACCTTGCCCCAGAGATTATCCAATCCGACGGTCACGGCAAGGCCG CGGATTGGTGGGCATGTGGGGTGTTGTGCTACGAGATGCTGGTTGGATATCCGCCCTTCTTCGACGAATCTCCGT ACGGCATTTACGAAAAGATTCTGAACGGCCAAATCCACTGGCCGCGGCACATTGATCGTCTTTCAAAAGACTTGA TCAAGTCGTTCCTCAACCCAGATCGCACCAAGCGACTGGGTAACATGCTGGGAGGCCCCCAGGATATCCTTGACC ATCCCTGGTTTAGAGGTGTTGATTGGGATGCATTGGAAAGGCGTGAAATCAACGTATGTAGTGTTTACTCGTCTC CCTCTTCTTTTCGCTTAACCGTTGCGTAGGCTCCCATTATCCCAAGGACGACATCGGTCGACGATACCCGCCACT TCTTGCATCTCCCTCCTCCTACCGCTGAGGAAATCCCCGGCCTTGTTGGGCAAGATCTCCCTCAGCCACGCTTTG ACCCGATCAATTACCACTTCCTCGAGTTTTAAGTTCTCGGGTCACCCTTTTCCTTGCTCTTTTCGACCATCTCTG AATGGATCCCACGCTCTTTCGCCTTTCCCAGTCTCCACTCTTTAATCCATCTTCTGAATCACTTTATTACGCGCC TCGGTTCAGCCTTATCCCTATTTATTGCATTCGCATCTTCGTTCGTATCTTACCCTGCAGCATCTGGAATCCCCT ATTTCTGTCTCGAAAACTGTATCCAATTCTGCCTCTCTCTTTGGTGGCTATTCTTATCTTGGTGCCACATCCCAC TGTATTTTTCGCCTCCCAATCTTGCGTATGCTCTCTGTATTGCCCATTCCATTCCTTTTGTGATTTGCGGCAGTA GAACATAGTTGTTTCTCTCTGCTTTCGATGTCCTGTAGCCTTTCACTTTTTCTTGCATGTTGTTCTCTACAACAC CCACCCTATGTAGCCTTGTCATCTACTCGTCACATCCTCTGGATGTTTGACTGCTGTGTATTTTTGCCATCCATA TACCACTTTCGAGTCTCGTATTTCCGTCGCTGTTAGGTGTGCGACGTAATCATATATCCCCTATATTACTTGATA CTTGACCTTCGCTTTTATCAATGCTACTATTTGGCTTG |
Length | 2438 |