Systematic name | CopciAB_362899 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | gsk3 | Synonyms | 362899 |
Uniprot id | Functional description | Belongs to the protein kinase superfamily | |
Location | scaffold_2:2398778..2400869 | Strand | - |
Gene length (nt) | 2092 | Transcript length (nt) | 1544 |
CDS length (nt) | 1188 | Protein length (aa) | 395 |
Strain name | Gene / Protein name |
---|---|
Schizosaccharomyces pombe | gsk3 |
Aspergillus nidulans | AN6508_gsk3 |
Neurospora crassa | prk-1 |
Saccharomyces cerevisiae | YMR139W_RIM11 |
Strain name | Gene / Protein name | Pident | E-value | Bits |
---|---|---|---|---|
Hypsizygus marmoreus strain 51987-8 | Hypma_RDB24164 | 93.9 | 8.016E-255 | 777 |
Agrocybe aegerita | Agrae_CAA7267625 | 92.1 | 2.084E-251 | 767 |
Pleurotus eryngii ATCC 90797 | Pleery1_1453481 | 91.1 | 5.364E-249 | 760 |
Pleurotus ostreatus PC15 | PleosPC15_2_1059568 | 90.8 | 1.013E-248 | 759 |
Pleurotus ostreatus PC9 | PleosPC9_1_116984 | 90.8 | 9.916E-249 | 759 |
Flammulina velutipes | Flave_chr10AA00118 | 90.6 | 5.386E-248 | 757 |
Lentinula edodes NBRC 111202 | Lenedo1_1040327 | 90.3 | 6.395E-247 | 754 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_19511 | 90.3 | 6.346E-247 | 754 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_123967 | 91.1 | 6.434E-246 | 751 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_190701 | 90.8 | 2.559E-245 | 749 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_111475 | 90.8 | 2.667E-245 | 749 |
Schizophyllum commune H4-8 | Schco3_2606716 | 89.1 | 5.664E-241 | 737 |
Auricularia subglabra | Aurde3_1_1041435 | 84.8 | 1.534E-233 | 716 |
Lentinula edodes B17 | Lened_B_1_1_14670 | 90.5 | 2.544E-202 | 625 |
Grifola frondosa | Grifr_OBZ75058 | 48.9 | 9.504E-95 | 314 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | gsk3 |
---|---|
Protein id | CopciAB_362899.T0 |
Description | Belongs to the protein kinase superfamily |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
---|---|---|---|---|---|
CDD | cd14137 | STKc_GSK3 | IPR039192 | 36 | 329 |
Pfam | PF00069 | Protein kinase domain | IPR000719 | 39 | 326 |
Prediction | Start | End | Score |
---|---|---|---|
No records |
Domain n | Start | End | Length |
---|---|---|---|
No records |
Accession | Description |
---|---|
IPR008271 | Serine/threonine-protein kinase, active site |
IPR039192 | Glycogen synthase kinase 3, catalytic domain |
IPR000719 | Protein kinase domain |
IPR017441 | Protein kinase, ATP binding site |
IPR011009 | Protein kinase-like domain superfamily |
Go id | Term | Ontology |
---|---|---|
GO:0004672 | protein kinase activity | MF |
GO:0006468 | protein phosphorylation | BP |
GO:0005524 | ATP binding | MF |
KEGG Orthology |
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K03083 |
K08282 |
K12766 |
COG category | Description |
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G | Belongs to the protein kinase superfamily |
Class | Family | Subfamily |
---|---|---|
No records |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_362899.
Sequence id | CopciAB_362899.T0 |
---|---|
Sequence |
>CopciAB_362899.T0 MATHGPINGVKISPIDDPHKVVRVIASDGKTGETRELSYTNCKVIGNGSFGVVFQARLLGVPKDQEDIAIKKVLQ DKRFKNRELQIMRLVSHPNVVDLKAFFYSNGDKKDEVYLNLVLEYVPETVYRASRHYSKLKQPMPMLQIKLYMYQ LLRSLAYIHSVGICHRDIKPQNLLLNPSTGVLKLCDFGSAKILVAGEPNVSYICSRYYRAPELIFGATNYTTNID IWSTGCVMAELMLGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIKPHPFSKVFRPRTAPEAI DLVSKLLEYTPGARLSAVEAMVHPFFDELRAEGAKMPNGKEFPRLFDFTREELSVRPDLIRKLVPPHAEPELASR SIALDTFVPIPLEQMKISLD |
Length | 395 |
Sequence id | CopciAB_362899.T0 |
---|---|
Sequence |
>CopciAB_362899.T0 ATGGCTACCCATGGTCCAATCAATGGTGTAAAGATTTCTCCGATCGACGACCCTCATAAAGTCGTGAGGGTGATT GCGTCCGACGGCAAGACGGGCGAGACAAGGGAGCTCTCATACACCAACTGCAAGGTCATTGGCAATGGCTCTTTC GGTGTCGTTTTCCAGGCCAGGCTCCTAGGGGTGCCCAAGGATCAGGAGGATATTGCTATCAAGAAGGTTCTACAG GACAAGCGATTCAAGAATCGTGAACTTCAAATCATGAGACTCGTATCCCACCCCAACGTGGTTGACCTCAAGGCG TTCTTCTATTCGAATGGTGACAAGAAAGACGAAGTGTACCTCAACCTTGTTCTGGAATACGTTCCAGAGACCGTC TACCGCGCCAGTCGCCACTACTCCAAGCTAAAGCAACCCATGCCAATGCTCCAAATCAAGCTGTACATGTACCAA CTCTTGCGATCCCTCGCTTACATCCACTCTGTTGGAATCTGTCACCGTGATATCAAACCCCAGAACTTGCTTCTC AACCCTTCCACTGGTGTCTTGAAGCTCTGCGATTTCGGCTCCGCAAAGATCCTCGTCGCTGGCGAGCCCAACGTC AGCTATATCTGCTCTAGGTACTACCGTGCCCCCGAGCTCATCTTCGGAGCTACCAACTACACCACCAATATCGAC ATCTGGTCAACTGGATGTGTCATGGCTGAGCTTATGCTAGGCCAACCGTTGTTCCCGGGAGAGAGCGGTATAGAC CAGTTGGTGGAGATTATCAAGGTTCTTGGCACGCCTTCTCGCGAGCAGATCAAGACGATGAATCCCAACTATATG GAGCACAAATTCCCCCAGATCAAACCCCATCCGTTCTCAAAAGTTTTCCGACCACGCACTGCCCCAGAAGCGATT GACCTGGTTTCTAAATTGCTAGAATATACTCCTGGAGCACGACTTAGCGCTGTTGAGGCCATGGTTCACCCATTC TTTGATGAATTGCGGGCGGAAGGTGCCAAAATGCCGAATGGAAAGGAGTTCCCGCGCCTCTTTGACTTTACACGG GAAGAGCTTTCTGTGCGACCGGACCTGATCCGGAAGTTGGTTCCACCACACGCAGAACCGGAGCTGGCCTCGCGG TCGATTGCGCTGGACACATTTGTGCCCATACCTTTGGAGCAGATGAAGATCTCACTGGACTGA |
Length | 1188 |
Sequence id | CopciAB_362899.T0 |
---|---|
Sequence |
>CopciAB_362899.T0 ATCTCACCCTTTGTCTTGTCCACGACCTCAACACTCACAACACCTTTCTCCCCTTTTTTCTTTTATTACGACCCG TGTTCGTCGTTTCCCCCGCTGAACAGCCCAATCCTTCCCCAAAGTCTCATTTTGATCCCAGTAACGCCCTTTATC CACCAAGTTTCTAATTCACAGCTTTTCCAAACGCTATGGCTACCCATGGTCCAATCAATGGTGTAAAGATTTCTC CGATCGACGACCCTCATAAAGTCGTGAGGGTGATTGCGTCCGACGGCAAGACGGGCGAGACAAGGGAGCTCTCAT ACACCAACTGCAAGGTCATTGGCAATGGCTCTTTCGGTGTCGTTTTCCAGGCCAGGCTCCTAGGGGTGCCCAAGG ATCAGGAGGATATTGCTATCAAGAAGGTTCTACAGGACAAGCGATTCAAGAATCGTGAACTTCAAATCATGAGAC TCGTATCCCACCCCAACGTGGTTGACCTCAAGGCGTTCTTCTATTCGAATGGTGACAAGAAAGACGAAGTGTACC TCAACCTTGTTCTGGAATACGTTCCAGAGACCGTCTACCGCGCCAGTCGCCACTACTCCAAGCTAAAGCAACCCA TGCCAATGCTCCAAATCAAGCTGTACATGTACCAACTCTTGCGATCCCTCGCTTACATCCACTCTGTTGGAATCT GTCACCGTGATATCAAACCCCAGAACTTGCTTCTCAACCCTTCCACTGGTGTCTTGAAGCTCTGCGATTTCGGCT CCGCAAAGATCCTCGTCGCTGGCGAGCCCAACGTCAGCTATATCTGCTCTAGGTACTACCGTGCCCCCGAGCTCA TCTTCGGAGCTACCAACTACACCACCAATATCGACATCTGGTCAACTGGATGTGTCATGGCTGAGCTTATGCTAG GCCAACCGTTGTTCCCGGGAGAGAGCGGTATAGACCAGTTGGTGGAGATTATCAAGGTTCTTGGCACGCCTTCTC GCGAGCAGATCAAGACGATGAATCCCAACTATATGGAGCACAAATTCCCCCAGATCAAACCCCATCCGTTCTCAA AAGTTTTCCGACCACGCACTGCCCCAGAAGCGATTGACCTGGTTTCTAAATTGCTAGAATATACTCCTGGAGCAC GACTTAGCGCTGTTGAGGCCATGGTTCACCCATTCTTTGATGAATTGCGGGCGGAAGGTGCCAAAATGCCGAATG GAAAGGAGTTCCCGCGCCTCTTTGACTTTACACGGGAAGAGCTTTCTGTGCGACCGGACCTGATCCGGAAGTTGG TTCCACCACACGCAGAACCGGAGCTGGCCTCGCGGTCGATTGCGCTGGACACATTTGTGCCCATACCTTTGGAGC AGATGAAGATCTCACTGGACTGAATTGCGGCGCAGTCCTCTGGGGTCGCGGAGGGGGACCGTGGCCGGTTTATGA TGCGATGCTTAGCGCTCATTTCGTTTCTATTCCTTGTATATATCTTGAATTGAATTCCGCGCGCGCCCTGTATAA TGTAGTACCACAGCGATGGAAATACTATGATATTTTTGAAGAGG |
Length | 1544 |
Sequence id | CopciAB_362899.T0 |
---|---|
Sequence |
>CopciAB_362899.T0 ATCTCACCCTTTGTCTTGTCCACGACCTCAACACTCACAACACCTTTCTCCCCTTTTTTCTTTTATTACGACCCG TGTTCGTCGTTTCCCCCGCTGAACAGCCCAATCCTTCCCCAAAGTCTCATTTTGATCCCAGTAACGCCCTTTATC CACCAAGTTTCTAATTCACAGCTTTTCCAAACGCTATGGCTACCCATGGTCCAATCAATGGTGTAAAGATTTCTC GTATGTCCTCTATTTCTCTTCGTTTCCCCGTTTCAGACGCTCAACATCCCATATTTGGCCGTTTCTGCTTAATTC GTGATCGTTTTCTCAACAACCGCTGGCGTGCAATCTCTCACATCGATGGAATCCTAATCCACTGCTCGTTTCACT ACCTCGTAATCGCCTCTCATCGACCTGTTCTCTTGCGCGATATCAGCGATCGACGACCCTCATAAAGTCGTGAGG GTGATTGCGTCCGACGGCAAGACGGGCGAGACAAGGGAGCTCTCATACACCAACTGCAAGGTCATTGGCAATGGC TCTTTCGGTGTCGTTTTCCAGGCCAGGCTCCTAGGGGTGCCCAAGGATCAGGAGGATATTGCTATCAAGAAGGTT CTACAGGACAAGCGATTCAAGGTGAGTTTAAGGTCCGGATCTTTCAAACCCAGCCTCCTCCCCAAACCAGCTCCA CTCCTCCTTCACATCCTGTGCCAGCTCACAATATGATATCCTTCTAGAATCGTGAACTTCAAATCATGAGACTCG TATCCCACCCCAACGTGGTTGACCTCAAGGCGTTCTTCTATTCGAATGGTGACAAGGTATCTCCCTATCTCCAGG TTTCCCAGGAGAAATTTGACCATCTCAACCAACAGAAAGACGAAGTGTACCTCAACCTTGTTCTGGAATACGTTC CAGAGACCGTCTACCGCGCCAGTCGCCACTACTCCAAGCTAAAGCAACCCATGCCAATGCTCCAAATCAAGCTGT ACATGTACCAACTCTTGCGATCCCTCGCTTACATCCACTCTGTTGGAATCTGTCACCGTGATATCAAACCCCAGA ACTTGCTTCTCAACCCTTCCACTGGTGTCTTGAAGCTCTGCGATTTCGGCTCCGCAAAGATCCTCGTCGCTGGCG AGCCCAACGTCAGCTATATCTGCTCTAGGTACTACCGTGCCCCCGAGCTCATCTTCGGAGCTACCAACTACACCA CCAATATCGGTTAGTATGGTTGACGTTGTTGCTCTGTTCCGTGCTTTAACCCCTTTCTCTGTAGACATCTGGTCA ACTGGATGTGTCATGGCTGAGCTTATGCTAGGCCAACCGTTGTTCCCGGGAGAGAGCGGTATAGACCAGTTGGTG GAGATTATCAAGGTTCTTGGCACGCCTTCTCGCGAGCAGATCAAGACGATGAATCCCAACTATATGGAGCACAAA TTCCCCCAGATCAAACCCCATCCGTTCTCAAAAGTGAGTTGACGACGACGATAAGGGATTGTCGTCAGCAGCGTG GAGACTGATGCTCTTGTTTCCCAGGTTTTCCGACCACGCACTGCCCCAGAAGCGATTGACCTGGTTTCTAAATTG CTAGAATATACTCCTGGAGCACGACTTAGCGCTGTTGAGGCCATGGTTCACCCATTCTTTGATGAATTGCGGGCG GAAGGTGCCAAAATGCCGAATGGAAAGGAGTTCCCGCGCCTCTTTGACTTTACACGGGAAGGTAAGAATGGCGCT ATTACCCAGAATGGCGGATGACTGACCGATGTGTTAATTTTTTCCCCTTGCTTCTTATGCAGAGCTTTCTGTGCG ACCGGACCTGATCCGGAAGTTGGTTCCACCACACGCAGAACCGGAGCTGGCCTCGCGGTCGATTGCGCTGGACAC ATTTGTGCCCATACCTTTGGAGCAGATGAAGATCTCACTGGACTGAATTGCGGCGCAGTCCTCTGGGGTCGCGGA GGGGGACCGTGGCCGGTTTATGATGCGATGCTTAGCGCTCATTTCGTTTCTATTCCTTGTATATATCTTGAATTG AATTCCGCGCGCGCCCTGTATAATGTAGTACCACAGCGATGGAAATACTATGATATTTTTGAAGAGG |
Length | 2092 |