CopciAB_369919
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_369919 Strain Coprinopsis cinerea Okayama 7
Standard name AMS1 Synonyms 369919
Uniprot id Functional description Alpha mannosidase, middle domain
Location scaffold_10:191533..196898 Strand +
Gene length (nt) 5366 Transcript length (nt) 3944
CDS length (nt) 3651 Protein length (aa) 1216

Reciprocal best hits in model fungi

Strain name Gene / Protein name
Schizosaccharomyces pombe ams1
Saccharomyces cerevisiae YGL156W_AMS1
Neurospora crassa gh38-1
Aspergillus nidulans AN2936

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7262329 71.3 0 1819
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_121861 68.1 0 1693
Hypsizygus marmoreus strain 51987-8 Hypma_RDB17533 67.8 0 1689
Ganoderma sp. 10597 SS1 v1.0 Gansp1_73062 66 0 1665
Lentinula edodes NBRC 111202 Lenedo1_1092642 65.9 0 1647
Lentinula edodes W1-26 v1.0 Lentinedodes1_2707 65.6 0 1634
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_103312 65.4 0 1629
Pleurotus ostreatus PC9 PleosPC9_1_84710 66.6 0 1598
Pleurotus ostreatus PC15 PleosPC15_2_1076966 66.5 0 1578
Pleurotus eryngii ATCC 90797 Pleery1_1445060 65.4 0 1564
Flammulina velutipes Flave_chr09AA00284 61.2 0 1448
Grifola frondosa Grifr_OBZ74598 61 0 1420
Schizophyllum commune H4-8 Schco3_2639708 57 0 1404
Lentinula edodes B17 Lened_B_1_1_14846 64 0 1202
Auricularia subglabra Aurde3_1_1178449 59.9 0 1199

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 719.2744 30.3667 17.5322
oidia 356.7398 11.6193 6.7084
vegetative_mycelium 298.7349 13.5158 7.8034
primordia 325.0065 33.8553 19.5463
hyphal_knot 665.9188 50.1806 28.9718
young_fruiting_body 413.4272 39.1629 22.6107
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 206.8675 35.9355 20.7474
Wheat bran 181.2973 11.7642 6.7921
Horse manure 343.0582 80.1903 46.2979
Oak leaves 394.2547 144.4296 83.3865
Hay 345.7974 58.9808 34.0526
Corn stalk 329.3921 35.8652 20.7068
Pectine 258.5824 14.8427 8.5694
Microcrystalline cellulose 450.4651 82.1867 47.4505
Xylose 283.0231 42.1621 24.3423
Cellobiose 242.3579 44.6719 25.7913
Lignin 301.7065 71.6226 41.3513
Apple peels 356.6616 45.045 26.0067
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 180.0238 10.2021 5.8902
Bsubtilis 263.6785 31.7621 18.3379
Ecoli 307.3804 28.1734 16.2659
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 516.4467 111.2095 64.2068
BS 4h 79.3683 10.8516 6.2652
BS 8h 47.6636 7.4949 4.3272
BS 12h 42.1944 8.5194 4.9187
Oidia 0 h 129.0507 52.3039 30.1977
Oidia 18 h 73.6405 12.6882 7.3255
Sclerotia 299.81 115.5587 66.7179
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 134.5978 35.6771 20.5982
DM 36h 176.2358 17.6514 10.191
DM 60h 202.3202 19.8686 11.4711
DM 84h 260.414 9.5071 5.4889
DM 108h 306.8586 15.0023 8.6616
DM 132h 339.2793 40.6908 23.4928
DM 156hAE 338.6659 34.0266 19.6453
ELI1hAE 333.4819 61.2968 35.3897
ELI2hAE 340.3997 55.4474 32.0126
LI2hAE 312.6595 13.6076 7.8563
LI6hAE 367.546 17.5123 10.1107
LI12hAE 417.3324 55.5301 32.0603
LI18hAE 472.2635 58.2117 33.6085
LI 24hAE 417.9127 38.3164 22.122
DM 156hAM 305.387 40.846 23.5825
ELI1hAM 196.3497 62.6178 36.1524
ELI2hAM 152.9629 9.5533 5.5156
LI2hAM 128.5649 32.453 18.7367
LI6hAM 192.7445 54.7983 31.6378
LI12hAM 238.8645 46.1534 26.6467
LI18hAM 296.3373 17.4662 10.0841
LI 24hAM 406.7321 107.0385 61.7987
LI 24hHK 405.9458 93.2296 53.8262
L/D 6h 580.3305 76.7856 44.3322
L/D 12h 617.1995 111.0003 64.0861
L/D 18h 380.4677 76.9735 44.4407
L/D 24h 323.2856 53.1243 30.6713
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 385.5559 124.3342 71.7844
Hyphal knots 461.4698 56.8425 32.818
Primordium 1 399.375 59.3926 34.2903
Primordium 2 397.088 23.9258 13.8136
Young Fruiting body cap 403.387 138.4816 79.9524
Younf fruiting body gill 254.5469 95.2821 55.0111
Young fruiting body stipe 280.7337 29.9969 17.3187
Mature fruiting body cap_gill 407.6748 149.2977 86.1971
Mature fruiting body stipe 338.0097 64.1178 37.0184
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 390.3901 138.8733 80.1785
NH4NO3 213.3796 34.8669 20.1304
Proline 193.0078 47.1379 27.2151
Tryptophan 154.9443 52.6042 30.3711
Isoleucin 187.377 18.5959 10.7364
Arginine 257.8988 27.21 15.7097
Metionine 195.4613 8.6133 4.9729
NaNO3 197.4038 6.3499 3.6661
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 390.3901 138.8733 80.1785
Citrus peel 225.6214 34.2448 19.7712
Poplar leaves 468.0838 151.2108 87.3016
Typha leaves 282.2099 142.3871 82.2072
Overwintered Salix leaves 253.3845 73.9919 42.7192
Reed flowering 200.3867 8.3434 4.8171
Tigernut 143.0516 22.3074 12.8792
Energy cane 411.4172 170.4635 98.4172
Guar gum 562.3926 326.9261 188.7509
Apple peels 134.4257 31.4624 18.1648
Cellobiose 116.4815 11.9573 6.9036
Corn stalk 311.7157 45.7357 26.4055
Horse manure 406.4671 49.8423 28.7765
Lignin 182.4582 29.4129 16.9815
Microcrystalline cellulose 230.6403 40.7833 23.5462
Oak leaves 447.4005 25.4079 14.6693
Pectin esterified 230.0601 91.673 52.9274
Poplar sawdust 687.3219 23.5597 13.6022
Wheat bran 302.7492 29.1737 16.8434
Chlamydomonas reinhardtii 617.164 72.5083 41.8627
Vertatryl alcohol 220.588 16.9587 9.7911
Furfural 324.3648 21.1158 12.1912
Autoclaved mycelium 287.0817 112.1879 64.7717
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 333.5448 6.9607 4.0187
Ribose 540.6517 76.22 44.0056
Mannose 351.9541 24.0658 17.0171
Fructose 466.458 30.5142 17.6174
Arabinose 520.2873 105.8542 61.115
Xylose 392.8526 30.0663 17.3588
Galacturonic acid 536.5944 66.634 38.4712
Rhamnogalacturonan 459.6008 32.7897 18.9312
Pectin esterified 512.2164 50.7269 29.2872
Polygalacturonic acid 523.166 26.4114 15.2486
Sodium acetate 446.024 91.1587 52.6305
No nitrogen 298.5697 21.984 12.6924
BSA 457.0551 49.7358 28.715
Glutamine 478.2601 8.7704 5.0636
No phosphate 305.4564 25.2829 14.5971
No carbon 494.4612 29.2834 20.7065
No sulphur 306.4751 45.8853 26.4919
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 390.3901 138.8733 80.1785
Amylose 1053.3209 93.2942 53.8635
Fucose 865.637 252.0894 145.5439
Galactose 971.9982 154.1756 89.0133
Lactose 452.6909 52.7885 30.4775
Maltose 821.423 41.2729 23.8289
Mannitol 605.6323 61.3631 35.428
Rhamnose 588.2486 210.3806 121.4633
Sorbitol 799.695 87.8972 50.7475
Trehalose 522.8064 295.9841 170.8865
Glycerol 562.4521 284.824 164.4432
Glucuronic acid 960.7491 108.7847 62.8069
Arabinan 731.9772 318.032 183.6159
Galactan 462.1914 73.6687 42.5326
Galactomannan 340.178 186.7093 107.7966
Glucan 438.9592 155.3542 89.6938
Xylan 767.5804 125.4505 72.4289
Xyloglucan 755.4305 97.7962 56.4627
Arabinogalactan 751.2851 27.847 16.0775
Pectin 435.0984 136.1982 78.6341
Rhamnogalacturonan 310.1321 55.4753 32.0287
Polygalacturonic acid 602.3179 87.8038 50.6935
Mannan 898.5154 83.2812 48.0824
Amylopectin 478.8041 223.2774 128.9093
Inulin 439.6163 19.1524 11.0576
BSA 168.853 6.3788 3.6828
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 202.3202 19.8686 11.4711
2h WAT 320.6911 20.7857 12.0006
4h WAT 438.1621 34.3148 19.8117
8h WAT 671.2868 144.7919 83.5957
16h WAT 489.0443 11.4089 6.5869
24h WAT 460.8469 9.156 5.2862
WAT hyphal knot -30h 408.9666 58.0694 33.5264
WAT hyphal knot -22h 303.4807 24.5907 14.1975
WAT hyphal knot -15h 377.4275 37.8638 21.8607
WAT hyphal knot -7.5h 483.407 33.9073 19.5764
WAT hyphal knot 350.7081 73.134 42.224
WAT hyphal knot +7.5h 320.7912 16.5585 9.56
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 178.576 46.1214 26.6282
Straw 3h 210.0216 47.8816 27.6444
Straw 6h 170.9166 35.5856 20.5454
Straw 12h 222.397 16.3193 9.422
Straw 24h 247.4596 37.6957 21.7636
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 142.2948 18.9048 10.9147
Frost (-20C, 30min) 395.528 19.2147 11.0936
Heat shock (47C, 2h) 81.0996 5.2254 3.0169
High CO2 235.1125 45.909 26.5056
Drought (4% agar, 12h) 225.8964 40.6004 23.4407
Oxidative (1mM H2O2, 3h) 200.3596 17.6007 10.1618
Acidic (pH4, 3h) 198.4854 14.9645 8.6398
Alkaline (pH9, 3h) 146.6534 7.1049 4.102
Osmotic (sorbitol 2h) 356.0956 106.0243 61.2131
CongoRed (3h) 235.5099 31.8395 18.3825
Cobalt chloride control 443.0785 40.9729 23.6557
Cobalt chloride 2mM 400.1394 57.732 33.3316
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 203.1729 91.9144 53.0668
Cold stimulation 176.2816 24.6449 14.2287
Scratched surface 231.0803 23.4086 13.515
Ca2+, 200mM, 24h 119.9194 20.9832 12.1147
Cu2+, 2mM, 6h 135.5436 5.5373 3.197
Voriconazole 148.1345 39.8351 22.9988
Trichoderma interaction, early 175.8668 37.4857 21.6424
Trichoderma interaction 60h 254.7687 7.4002 4.2725
Cobalt chloride 2mM repeat 347.3268 74.6903 43.1225
Hypoxia 239.8568 49.7653 28.732
Hypoxia control 248.0714 23.5561 13.6001
Protoplastation control 334.656 19.1172 13.5179
Protoplastation 3.5h 236.7718 21.4202 15.1464
Protoplastation 1.5h 211.5299 13.2383 9.3609

General data

Systematic name AMS1
Protein id CopciAB_369919.T0
Description Alpha mannosidase, middle domain

Annotation summary

0 300 600 900 1200 1216

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd10812 GH38N_AMII_ScAms1_like - 303 557
Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain IPR000602 303 566
Pfam PF09261 Alpha mannosidase middle domain IPR015341 575 675
Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain IPR011682 792 1002

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR015341 Glycoside hydrolase family 38, central domain
IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR037094 Glycoside hydrolase family 38, central domain superfamily
IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily
IPR000602 Glycoside hydrolase family 38, N-terminal domain
IPR028995 Glycoside hydrolase families 57/38, central domain superfamily
IPR011682 Glycosyl hydrolase family 38, C-terminal
IPR011013 Galactose mutarotase-like domain superfamily

GO

Go id Term Ontology
GO:0004559 alpha-mannosidase activity MF
GO:0006013 mannose metabolic process BP
GO:0005975 carbohydrate metabolic process BP
GO:0003824 catalytic activity MF
GO:0030246 carbohydrate binding MF

KEGG

KEGG Orthology
K01191

EggNOG

COG category Description
G Alpha mannosidase, middle domain

CAZy

Class Family Subfamily
GH GH38

Transcription factor

Group
No records

Conservation of CopciAB_369919 across fungi.

Arrow shows the origin of gene family containing CopciAB_369919.

Protein

Sequence id CopciAB_369919.T0
Sequence >CopciAB_369919.T0
MSCHHRSGYSPAYPPPPPSATTTTTNGDYPELNYSPGAKWIKHLTRSRLNNFQGGHFNDYNLSSVLFTQRKDSPE
YVKLKVWSAPGQTKPTFEEAMQQKFRTARKGESFGPSWTNHWWQVTVHIPQDWDQYERVQFEFDPGCEAMIYSMD
GTPLQGITGGFGGDRRVDYIIPPEARARGVHEFVIESSCNGMFGVPWSGDIIAPPDMNRYFRLASADLVVPNQEA
WRLLWDWEALKQIISNVPGNTILQNKALTAANEIMNVFDKGDLAAILRARKLADEVFGEGWEEKGADIYKEGPER
PTIWGIGHCHIDSAWLWPYRVTQQKVARSWSTQIDLMERYPEHRFACSSAQQYKWLELLYPALFLNVKQKIAEGK
FHPIGGSWVENDGNMPSGEALVRQLVAGQRYFETRFGIRCEVGWLPDSFGLTGAYPQIMRKAGMKYFFTQKLSWN
NINKFPHSTFNWVGIDGTQVLCHMTPVETYTAQATVHDIKKGLENHKNLESSDTALLVFGNGDGGGGPLSKMLEN
LRRIRAVTNKHRELPPVDMGHSVDDFFHDLEKTSGEGKRLPNWHGELYLEFHRGTYTSHGSIKKGNRHSEILLRD
VELVASLASLYKYHKNSYIYPKKDIDEAWEKVLLNQFHDVLPGSSIGMVYEDAEQLYAEVKRDGEAILEEALSVL
FPNSMPLTCNTQSKALAGGAKVVALNTTFFPRLDVVQVPLGSSPGGNGWGWSTPGGSTQSIRSQVHQVSEDGKVG
WGIMQCARGGGAIGELVTGSNELRARLKPVSVYTNGSDHFVLRNSTVQLTISEGRITSLLDVQLDRELIQEGQTG
GLVIFEDRPNYWDAWDVEIHHLEVKKSLKFSNVSVVAQGPLYAAVRAEVKYGQSTIVLTISLGATTATVRENSRS
FFNFEAVVDWRQRHEFLKFELPLNIHSPNATYETQFGHVQRPTHKNTTWDMAKFEVCGHKYADLSEFGYGVAYLS
ESKYGFSCLGNLLSISLLRAATAPDAEQDQGEHKFSWAVYPHEGHFLESDVPVAGYLYNSPLRVRVVPPGTEDLL
STHRPLFAVDGARNVFLETVKRGEYDSYDAPFTLESADSDSEGDEPAATRTTLVLRLYEAYGGHASGNLLISNRL
PVVEAYETNLLEDDQDAVGLRLLSVQSSNNNEDGVKSHSWGKSIPLKFRGFEVKTIKLVLGAPPTPTPRSPKTGE
KRSSWVNVDEDRFMDL
Length 1216

Coding

Sequence id CopciAB_369919.T0
Sequence >CopciAB_369919.T0
ATGTCCTGCCACCATCGTTCGGGATATTCACCAGCTTACCCACCACCCCCGCCGTCTGCGACGACGACGACGACA
AATGGAGACTACCCAGAGCTCAATTACAGCCCTGGTGCTAAATGGATCAAGCACCTTACCCGGTCGAGGTTGAAC
AACTTCCAGGGCGGGCATTTCAACGACTACAATCTCTCGTCTGTTCTCTTTACGCAGAGGAAGGACAGTCCTGAA
TACGTCAAGCTCAAGGTTTGGAGCGCGCCTGGACAGACCAAACCGACGTTCGAGGAGGCCATGCAACAGAAGTTC
AGAACTGCTCGGAAGGGAGAATCGTTTGGACCGTCTTGGACAAACCACTGGTGGCAAGTCACCGTCCATATTCCC
CAAGACTGGGATCAGTACGAACGTGTTCAGTTCGAATTTGACCCAGGATGCGAAGCGATGATTTACAGTATGGAT
GGAACACCTCTTCAAGGCATCACAGGTGGATTCGGCGGTGACCGCCGTGTGGACTACATCATTCCACCTGAAGCC
CGTGCCCGAGGTGTTCACGAGTTCGTCATCGAATCAAGCTGCAATGGCATGTTCGGCGTCCCATGGAGCGGCGAT
ATCATCGCTCCTCCTGACATGAACCGGTACTTCCGTCTCGCTTCAGCTGACCTTGTTGTGCCGAATCAGGAAGCA
TGGCGGCTGCTGTGGGACTGGGAGGCATTGAAGCAAATCATTAGCAACGTTCCAGGGAACACTATCCTTCAGAAC
AAAGCCTTGACGGCGGCCAACGAGATCATGAACGTCTTTGACAAGGGCGATTTGGCGGCCATTCTCAGAGCACGC
AAGTTGGCTGATGAAGTCTTTGGTGAAGGATGGGAGGAGAAGGGCGCGGACATCTACAAAGAAGGGCCCGAAAGA
CCCACGATCTGGGGTATTGGACACTGCCATATTGACTCTGCTTGGCTATGGCCTTACCGCGTTACCCAGCAAAAG
GTCGCTCGTTCATGGTCCACTCAGATAGATTTGATGGAGCGCTACCCGGAACATCGCTTTGCATGCTCGTCCGCC
CAGCAGTACAAGTGGCTCGAACTTCTCTACCCTGCACTCTTCCTCAACGTCAAGCAAAAGATTGCCGAAGGAAAG
TTCCACCCCATTGGAGGCTCGTGGGTCGAAAACGACGGAAATATGCCCAGTGGAGAAGCGTTGGTCAGGCAACTT
GTAGCTGGCCAGCGATACTTTGAGACTAGGTTTGGTATCCGATGTGAGGTCGGTTGGCTCCCGGATAGTTTTGGT
TTGACGGGTGCCTATCCTCAGATTATGAGGAAAGCGGGGATGAAGTACTTCTTCACGCAGAAGCTTTCGTGGAAC
AATATCAACAAGTTCCCGCATAGTACTTTCAACTGGGTTGGTATCGATGGAACTCAGGTCCTGTGTCATATGACG
CCTGTCGAGACGTATACCGCGCAAGCTACGGTTCATGACATCAAGAAGGGGTTGGAGAACCACAAGAATCTCGAA
TCCTCGGATACCGCACTACTTGTTTTCGGAAACGGCGACGGAGGAGGCGGACCATTGTCGAAGATGTTGGAGAAC
CTTCGTCGAATTCGAGCTGTCACTAACAAGCACCGTGAACTTCCTCCTGTTGATATGGGACATAGTGTTGATGAT
TTCTTCCATGATCTTGAGAAGACGTCGGGGGAGGGGAAGAGGTTGCCGAATTGGCATGGGGAGTTGTACCTCGAG
TTCCACCGCGGCACGTATACGTCACACGGATCTATCAAGAAAGGTAATAGGCACTCGGAGATTCTGTTGAGGGAC
GTTGAGCTGGTCGCGTCTCTGGCGTCCCTCTACAAGTACCACAAGAACAGCTACATTTATCCCAAGAAAGACATT
GACGAAGCCTGGGAGAAGGTTTTGTTGAATCAATTCCATGATGTCCTTCCTGGGTCATCGATTGGCATGGTTTAC
GAAGACGCCGAACAGTTGTACGCTGAAGTGAAGCGTGACGGAGAAGCCATCCTTGAAGAAGCGCTCTCCGTCCTC
TTCCCCAACTCTATGCCTCTGACTTGCAACACGCAGTCCAAGGCCCTCGCCGGTGGCGCCAAGGTTGTCGCCCTG
AACACCACCTTCTTCCCCCGCCTGGATGTCGTCCAGGTTCCTTTGGGCAGCTCTCCTGGAGGCAACGGGTGGGGC
TGGAGCACTCCTGGTGGCTCTACGCAATCTATTCGTTCTCAGGTCCATCAAGTGAGCGAGGATGGCAAGGTTGGG
TGGGGGATTATGCAGTGTGCGCGAGGTGGAGGAGCGATTGGCGAGTTGGTCACCGGTAGTAATGAGTTAAGGGCT
AGGTTGAAGCCTGTTTCTGTCTACACGAATGGAAGCGACCATTTTGTACTGCGCAATTCGACTGTGCAGTTGACG
ATTTCTGAGGGCAGGATTACCAGTTTGCTTGATGTTCAACTTGATCGTGAATTGATACAAGAAGGACAAACGGGT
GGATTGGTTATTTTCGAGGATAGGCCCAACTACTGGGATGCCTGGGATGTTGAAATCCACCATCTTGAAGTGAAG
AAATCGCTCAAGTTTTCGAACGTGTCTGTTGTTGCTCAGGGTCCTCTCTATGCTGCCGTTCGTGCGGAGGTCAAA
TATGGGCAGAGTACGATCGTTCTTACGATCTCCTTGGGTGCGACAACTGCCACTGTTCGCGAGAACTCGCGCTCG
TTCTTCAACTTTGAAGCTGTGGTTGACTGGCGCCAGCGACACGAGTTCCTCAAATTTGAACTTCCGTTGAACATT
CACAGTCCCAATGCCACCTACGAAACCCAGTTTGGCCATGTTCAGCGTCCAACGCACAAGAACACCACTTGGGAC
ATGGCCAAGTTTGAGGTTTGCGGTCATAAGTATGCTGACCTCAGTGAGTTTGGGTATGGTGTTGCGTACCTTTCG
GAATCCAAGTATGGATTCTCGTGCTTGGGTAATTTGCTGTCCATTAGTTTGTTGCGAGCTGCTACTGCTCCGGAT
GCTGAGCAGGATCAAGGCGAACACAAGTTCTCGTGGGCTGTTTATCCCCACGAAGGGCATTTCCTGGAGTCGGAC
GTCCCCGTTGCTGGTTACCTCTACAACTCCCCCCTCCGCGTTCGTGTTGTTCCTCCGGGCACTGAAGACCTTCTC
TCGACCCATCGTCCCCTGTTCGCCGTCGACGGTGCGCGCAATGTCTTCCTCGAGACTGTCAAGCGTGGCGAGTAC
GACTCGTACGATGCGCCTTTCACTCTCGAGTCTGCGGACTCGGACTCGGAGGGTGACGAGCCGGCTGCGACTAGG
ACGACGCTCGTGCTGAGGCTGTACGAGGCTTATGGTGGGCATGCTTCCGGCAACCTGCTCATCTCGAACCGTCTC
CCCGTCGTTGAGGCCTATGAGACCAATCTCCTCGAGGACGATCAGGATGCAGTCGGACTTCGTCTTCTGTCCGTT
CAGTCTTCCAACAACAATGAGGACGGTGTCAAGTCTCATTCGTGGGGCAAGAGTATTCCGTTGAAGTTTAGAGGA
TTTGAGGTCAAGACGATTAAACTTGTTCTTGGTGCGCCTCCGACTCCGACTCCTCGGTCGCCGAAAACTGGGGAG
AAGAGGTCTAGTTGGGTGAATGTTGATGAGGATAGGTTTATGGATCTTTGA
Length 3651

Transcript

Sequence id CopciAB_369919.T0
Sequence >CopciAB_369919.T0
GCCTTTCCTGACCGTCTCTTCCAACCCACCACCATGTCCTGCCACCATCGTTCGGGATATTCACCAGCTTACCCA
CCACCCCCGCCGTCTGCGACGACGACGACGACAAATGGAGACTACCCAGAGCTCAATTACAGCCCTGGTGCTAAA
TGGATCAAGCACCTTACCCGGTCGAGGTTGAACAACTTCCAGGGCGGGCATTTCAACGACTACAATCTCTCGTCT
GTTCTCTTTACGCAGAGGAAGGACAGTCCTGAATACGTCAAGCTCAAGGTTTGGAGCGCGCCTGGACAGACCAAA
CCGACGTTCGAGGAGGCCATGCAACAGAAGTTCAGAACTGCTCGGAAGGGAGAATCGTTTGGACCGTCTTGGACA
AACCACTGGTGGCAAGTCACCGTCCATATTCCCCAAGACTGGGATCAGTACGAACGTGTTCAGTTCGAATTTGAC
CCAGGATGCGAAGCGATGATTTACAGTATGGATGGAACACCTCTTCAAGGCATCACAGGTGGATTCGGCGGTGAC
CGCCGTGTGGACTACATCATTCCACCTGAAGCCCGTGCCCGAGGTGTTCACGAGTTCGTCATCGAATCAAGCTGC
AATGGCATGTTCGGCGTCCCATGGAGCGGCGATATCATCGCTCCTCCTGACATGAACCGGTACTTCCGTCTCGCT
TCAGCTGACCTTGTTGTGCCGAATCAGGAAGCATGGCGGCTGCTGTGGGACTGGGAGGCATTGAAGCAAATCATT
AGCAACGTTCCAGGGAACACTATCCTTCAGAACAAAGCCTTGACGGCGGCCAACGAGATCATGAACGTCTTTGAC
AAGGGCGATTTGGCGGCCATTCTCAGAGCACGCAAGTTGGCTGATGAAGTCTTTGGTGAAGGATGGGAGGAGAAG
GGCGCGGACATCTACAAAGAAGGGCCCGAAAGACCCACGATCTGGGGTATTGGACACTGCCATATTGACTCTGCT
TGGCTATGGCCTTACCGCGTTACCCAGCAAAAGGTCGCTCGTTCATGGTCCACTCAGATAGATTTGATGGAGCGC
TACCCGGAACATCGCTTTGCATGCTCGTCCGCCCAGCAGTACAAGTGGCTCGAACTTCTCTACCCTGCACTCTTC
CTCAACGTCAAGCAAAAGATTGCCGAAGGAAAGTTCCACCCCATTGGAGGCTCGTGGGTCGAAAACGACGGAAAT
ATGCCCAGTGGAGAAGCGTTGGTCAGGCAACTTGTAGCTGGCCAGCGATACTTTGAGACTAGGTTTGGTATCCGA
TGTGAGGTCGGTTGGCTCCCGGATAGTTTTGGTTTGACGGGTGCCTATCCTCAGATTATGAGGAAAGCGGGGATG
AAGTACTTCTTCACGCAGAAGCTTTCGTGGAACAATATCAACAAGTTCCCGCATAGTACTTTCAACTGGGTTGGT
ATCGATGGAACTCAGGTCCTGTGTCATATGACGCCTGTCGAGACGTATACCGCGCAAGCTACGGTTCATGACATC
AAGAAGGGGTTGGAGAACCACAAGAATCTCGAATCCTCGGATACCGCACTACTTGTTTTCGGAAACGGCGACGGA
GGAGGCGGACCATTGTCGAAGATGTTGGAGAACCTTCGTCGAATTCGAGCTGTCACTAACAAGCACCGTGAACTT
CCTCCTGTTGATATGGGACATAGTGTTGATGATTTCTTCCATGATCTTGAGAAGACGTCGGGGGAGGGGAAGAGG
TTGCCGAATTGGCATGGGGAGTTGTACCTCGAGTTCCACCGCGGCACGTATACGTCACACGGATCTATCAAGAAA
GGTAATAGGCACTCGGAGATTCTGTTGAGGGACGTTGAGCTGGTCGCGTCTCTGGCGTCCCTCTACAAGTACCAC
AAGAACAGCTACATTTATCCCAAGAAAGACATTGACGAAGCCTGGGAGAAGGTTTTGTTGAATCAATTCCATGAT
GTCCTTCCTGGGTCATCGATTGGCATGGTTTACGAAGACGCCGAACAGTTGTACGCTGAAGTGAAGCGTGACGGA
GAAGCCATCCTTGAAGAAGCGCTCTCCGTCCTCTTCCCCAACTCTATGCCTCTGACTTGCAACACGCAGTCCAAG
GCCCTCGCCGGTGGCGCCAAGGTTGTCGCCCTGAACACCACCTTCTTCCCCCGCCTGGATGTCGTCCAGGTTCCT
TTGGGCAGCTCTCCTGGAGGCAACGGGTGGGGCTGGAGCACTCCTGGTGGCTCTACGCAATCTATTCGTTCTCAG
GTCCATCAAGTGAGCGAGGATGGCAAGGTTGGGTGGGGGATTATGCAGTGTGCGCGAGGTGGAGGAGCGATTGGC
GAGTTGGTCACCGGTAGTAATGAGTTAAGGGCTAGGTTGAAGCCTGTTTCTGTCTACACGAATGGAAGCGACCAT
TTTGTACTGCGCAATTCGACTGTGCAGTTGACGATTTCTGAGGGCAGGATTACCAGTTTGCTTGATGTTCAACTT
GATCGTGAATTGATACAAGAAGGACAAACGGGTGGATTGGTTATTTTCGAGGATAGGCCCAACTACTGGGATGCC
TGGGATGTTGAAATCCACCATCTTGAAGTGAAGAAATCGCTCAAGTTTTCGAACGTGTCTGTTGTTGCTCAGGGT
CCTCTCTATGCTGCCGTTCGTGCGGAGGTCAAATATGGGCAGAGTACGATCGTTCTTACGATCTCCTTGGGTGCG
ACAACTGCCACTGTTCGCGAGAACTCGCGCTCGTTCTTCAACTTTGAAGCTGTGGTTGACTGGCGCCAGCGACAC
GAGTTCCTCAAATTTGAACTTCCGTTGAACATTCACAGTCCCAATGCCACCTACGAAACCCAGTTTGGCCATGTT
CAGCGTCCAACGCACAAGAACACCACTTGGGACATGGCCAAGTTTGAGGTTTGCGGTCATAAGTATGCTGACCTC
AGTGAGTTTGGGTATGGTGTTGCGTACCTTTCGGAATCCAAGTATGGATTCTCGTGCTTGGGTAATTTGCTGTCC
ATTAGTTTGTTGCGAGCTGCTACTGCTCCGGATGCTGAGCAGGATCAAGGCGAACACAAGTTCTCGTGGGCTGTT
TATCCCCACGAAGGGCATTTCCTGGAGTCGGACGTCCCCGTTGCTGGTTACCTCTACAACTCCCCCCTCCGCGTT
CGTGTTGTTCCTCCGGGCACTGAAGACCTTCTCTCGACCCATCGTCCCCTGTTCGCCGTCGACGGTGCGCGCAAT
GTCTTCCTCGAGACTGTCAAGCGTGGCGAGTACGACTCGTACGATGCGCCTTTCACTCTCGAGTCTGCGGACTCG
GACTCGGAGGGTGACGAGCCGGCTGCGACTAGGACGACGCTCGTGCTGAGGCTGTACGAGGCTTATGGTGGGCAT
GCTTCCGGCAACCTGCTCATCTCGAACCGTCTCCCCGTCGTTGAGGCCTATGAGACCAATCTCCTCGAGGACGAT
CAGGATGCAGTCGGACTTCGTCTTCTGTCCGTTCAGTCTTCCAACAACAATGAGGACGGTGTCAAGTCTCATTCG
TGGGGCAAGAGTATTCCGTTGAAGTTTAGAGGATTTGAGGTCAAGACGATTAAACTTGTTCTTGGTGCGCCTCCG
ACTCCGACTCCTCGGTCGCCGAAAACTGGGGAGAAGAGGTCTAGTTGGGTGAATGTTGATGAGGATAGGTTTATG
GATCTTTGATCCTTTTTCGACCCTGAGGGACTCGGAGGGTATACCCCCGTGCCGGGATTGGTGTTCGTCCGCCCC
TACTTATGCTTCTCGTTGCTTCTATCTCTCTCTTTGTGTGTACCATAGTGCTCGCTCTCTCACACACTTTGCTCT
GCGCTGTGTCCCTCCCTGTACCATTTACTTTGTATGTGTTTTGTGTCTGTGCACTGTGTACCAACAGTATTGATT
CGTCCTCGTCCTCGGCACGTTCGTCCCGTTGTTCCAAGTTCTCG
Length 3944

Gene

Sequence id CopciAB_369919.T0
Sequence >CopciAB_369919.T0
GCCTTTCCTGACCGTCTCTTCCAACCCACCACCATGTCCTGCCACCATCGTTCGGGATATTCACCAGCTTACCCA
CCACCCCCGCCGTCTGCGACGACGACGACGACAAATGGAGACTACCCAGAGCTCAATTACAGCCCTGGTGCTAAA
TGGATCAAGCACCTTACCCGGTCGAGGTTGAACAACTTCCAGGGCGGGCATTTCAACGACTACAATCTCTCGTCT
GTTCTCTTTACGCAGAGGAAGGACAGTCCTGAATACGTCAAGCTCAAGGTGTAAGTCATATCTACAGCCTTCTCG
AGAGAAATGGCTAAAGGCGGACTGCACAATCTAGTTGGAGCGCGCCTGGACAGACCAAACCGACGTTCGAGGAGG
CCATGCAACAGAAGTTCAGAACTGCTCGGAAGGTACGCGACATGGCTTTAGCTTATCTATGTATCTGACCCCCCG
ACAGGGAGAATCGTTTGGACCGTCTTGTAAGGTTTCTCGTTACTGATGCTCGCGTGCGGGTCGCTTATTGTTCAA
TTAGGGGTAAGCGATTCAAGTTCGACTTTCATTTTATGCAAAAGGTCTCAGTCATGTGCCTAGACAAACCACTGG
TGGCAAGTCACCGTCCATATTCCCCAAGACTGGGATCAGTACGAACGTGTTCAGTGTGCGTATCCGTTCACCGTT
CAGCGAGGGACCGTTTCTCAGACACCAGACAGTCGAATTTGACCCAGGATGCGAAGCGATGATTTACAGTATGGA
TGGAACACCTCTTCAAGGTGAATATGCCTTCTCGTTGCGCGTCCTTCTCCATACTCATGGGAATCGTACAGGCAT
CACAGGTGGATTCGGCGGTGACCGCCGTGTGGACTACATCATTCCACCTGAAGCCCGTGCCCGAGGTGTTCACGA
GTTCGTCATCGAATCAAGCTGCAATGGCATGTTCGGCGTCCCATGGAGCGGCGATATCATCGCTCCTCCTGACAT
GAACCGGTACTTCCGTCTCGCTTCAGCTGACCTTGTTGTGCCGAATCAGGAAGCATGGCGGCTGCTGTGGGACTG
GGAGGCATTGAAGCAAATCATTAGCAACGTTCCAGGGAACACTATGTCAGTGGCCATGGTTGAAGTTCGACGTGC
CGCATGACGCTAATTGTGATTGACAGCCTTCAGAACAAAGCCTTGACGGCGGCCAACGAGATCATGAACGTCTTT
GACAAGGGCGATTTGGCGGCCATTCTCAGAGCACGCAAGTTGGCTGATGAAGTCTTTGGTGAAGGATGGGAGGAG
AAGGGCGCGGACATCTACAAAGAAGGGCCCGAAAGACCCACGATCTGGGGTATTGGACAGTGCGTGAATTTTACT
ACACTTGTAATCGCGTTCTTGACACGCCACGCCTTACTTAGCTGCCATATTGACTCTGCTTGGCTATGGCCTTAC
CGCGTTACCCAGCAAAAGGTCGCTCGTTCATGGTCCACTCAGATAGATTTGATGGAGCGCTACCCGGAACATCGC
TTTGCATGCTCGTCCGCCCAGCAGTACAAGTGGCTCGAACTTCTCTACCCTGCACTCTTCCTCAACGTCAAGCAA
AAGATTGCCGAAGGAAAGTTCCACCCCATTGGAGGCTCGTGGGTCGAAAACGACGGAAATATGCCCAGTGGAGAA
GCGTTGGTCAGGCAACTTGTAGCTGGCCAGCGATACTTTGAGACTAGGTTTGGTATCCGATGTGAGGTCGGTTGG
CTCCCGGATAGTTTTGGTTTGACGGGTGCCTATCCTCAGATTATGAGGAAAGCGGGTGAGTTTAGCGTTCGATGC
TCCGTGGAATGTTTGGCGTGCTGATCGACTTGTAGGGATGAAGTACTTCTTCACGCAGAAGCTTTCGTGGAACAA
TATGTGCGTTCTTCTCTCACATGTCCATCCGGCTTTCCTGCTAATTAATGGTCGACTTGCTTCTGCCGCCTGTTT
TAATTTTTGGTATACAGCAACAAGTTCCCGCATAGTACTTTCAACTGGGTTGGTATCGATGGAACTCAGGTCCTG
TGTCATATGACGCCTGTCGAGACGTATACCGCGCAAGCTACGGTTCATGACATCAAGAAGGGGTTGGAGAACCAC
AAGGTTGGTCGATCTACTCGCTCATCGTAGTTGCGTACTCATTCTGACTTGTTCGATAGAATCTCGAATCCTCGG
ATACCGCACTACTTGTTTTCGGAAACGGCGACGGAGGAGGCGGACCATTGTCGAAGATGTTGGAGAACGTAAGTC
GTACCCACCTTTTGCCGCAACGACATCCATAGTAATCTCATCGATTGTGTACTTAGCTTCGTCGAATTCGAGCTG
TCACTAACAAGCACCGTGAACTTCCTCCTGTTGATATGGGACATAGTGTTGATGATTTCTTCCATGATCTTGAGA
AGACGTCGGGGGAGGGGAAGAGGTTGCCGAATTGGCATGGGGAGTTGTACCTCGAGGTGAGTGGGGTCTTCATAG
GCCTATCTTGTACAACATAGGCTGACTCTTTGTCATTCTAGTTCCACCGCGGCACGTATACGTCACACGGATCTA
TCAAGAAAGGTAATAGGCACTCGGAGATTCTGTTGAGGGACGTTGAGGTACGTTGTCTTCGTTGTCGCGTAGATC
GTCTTTTGGGTTGTCGTGTAGATCCTGTACTGACGTGCGAAATTGTAGCTGGTCGCGTCTCTGGCGTCCCTCTAC
AAGTACCACAAGAACAGCTACATTTATCCCAAGAAAGACATTGACGAAGCCTGGGAGAAGGTTTTGTTGAATCAA
TGTAAGTGATATTTCGTAGCCACCTGGAACTCTGGCTGACGTTACGGTTCTTTTAGTCCATGATGGTAAGAAAAG
TCCAAAGGTCATAGCGTTAACGTACTCACCTCAACCCCACCTGTAGTCCTTCCTGGGTCATCGATGTGAGTATCC
ATGATTCGTGCTTCAGCCTTCGAACCCAGGCTGACGTTGGTCTTTCAGTGGCATGGTTTACGAAGACGCCGAACA
GTTGTACGCTGAAGTGAAGCGTGACGGAGAAGCCATCCTTGAAGAAGCGCTCTCCGTCCTCTTCCCCAACTCTAT
GCCTCTGACTTGCAACACGCAGTCCAAGGCCCTCGCCGGTGGCGCCAAGGTTGTCGCCCTGAACACCACCTTCTT
CCCCCGCCTGGATGTCGTCCAGGTTCCTTTGGGCAGCTCTCCTGGAGGCAACGGGTGGGGCTGGAGCACTCCTGG
TGGCTCTACGCAATCTATTCGTTCTCAGGTCCATCAAGTGAGCGAGGATGGCAAGGTTGGGTGGGGGATTATGCA
GTGTGCGCGAGGTGGAGGAGCGATTGGCGAGTTGGTCACCGGTAGTAATGAGTTAAGGGCTAGGTTGAAGCCTGT
TTCTGGTTGGTCTTTTTTTTTTCTGGTCGTATAGGAGATGGCGCTGACGAGCTTTCGTTTGACAGTCTACACGAA
TGGAAGCGACCATTTTGTACTGCGCAATTCGACTGTGCAGTTGACGATTTCTGAGGGCAGGATTACCAGTTTGCT
TGATGTTCAACTTGAGTATGTGTTTCTCGACCAGTGCCGATTTGACCTAGCGTTGATTGCCTCGATAGTCGTGAA
TTGATACAAGAAGGACAAACGGGTGGATTGGTTATTTTCGAGGATAGGCCCAACTACTGGGATGCCTGGGGTATG
TCTTGTCCTACCTCCGACCCTTCTGTCGCTGAGCCTGACGTGTGTTTGCAATGCAGATGTTGAAATCCACCATCT
TGAAGTGAAGAAATCGCTCAAGTTTTCGAACGTGTCTGTTGTTGCTCAGGGTCCTCTCTATGCTGCCGTTCGTGC
GGAGGTCAAATATGGGCAGAGTACGATCGTTCTTACGGTCCGTGTGGTTCTTCCATCTTCTGCCATCCATCCTCA
TTAGGTGGGCATTTCGCAGATCTCCTTGGGTGCGACAACTGCCACTGTTCGCGAGAACTCGCGCTCGTTCTTCAA
CTTTGAAGCTGTGGTTGACTGGCGCCAGCGACACGAGTTCCTCAAATGTACGTCTCCGCCTTTGCTTCGCTATAT
AGATCAGAGCCTGATATATGTTCTTCCAGTTGAACTTCCGTTGAACATTCACAGTCCCAATGCCACCTACGAAAC
CCAGTTTGGCCATGTTCAGCGTCCAACGCACAAGAACACCACTTGGGACATGGCCAAGTTTGAGGTTTGCGGTCA
TAAGTATGCTGACCTCAGTGAGTTTGGGTATGGTGTTGCGTACCTTTCGGAATCCAAGTATGGATTCTCGTGCTT
GGGTAATTTGCTGTCCATTAGTTTGTTGCGAGCTGCTACTGCTCCGGATGCTGAGCAGGATCAAGGTGAGTCGTC
TTGTTTTATCGACGTTGTACATAGGTTAAACTGTGCATAGGCGAACACAAGTTCTCGTGGGCTGTTTATCCCCAC
GAAGGGCATTTCCTGGAGTCGGACGTCCCCGTTGCTGGTTACCTCTACAACTCCCCCCTCCGCGTTCGTGTTGTT
CCTCCGGGCACTGAAGACCTTCTCTCGACCCATCGTCCCCTGTTCGCCGTCGACGGTGCGCGCAATGTCTTCCTC
GAGACTGTCAAGCGTGGCGAGTACGACTCGTACGATGCGCCTTTCACTCTCGAGTCTGCGGACTCGGACTCGGAG
GGTGACGAGCCGGCTGCGACTAGGACGACGCTCGTGCTGAGGCTGTACGAGGCTTATGGTGGGCATGCTTCCGGC
AACCTGCTCATCTCGAACCGTCTCCCCGTCGTTGAGGCCTATGAGACCAATCTCCTCGAGGACGATCAGGATGCA
GTCGGACTTCGTCTTCTGTCCGTTCAGTCTTCCAACAACAATGAGGACGGTGTCAAGTCTCATTCGTGGGGCAAG
AGTATTCCGTTGAAGTTTAGAGGATTTGAGGTCAAGACGATTAAACTTGTTCTTGGTGCGCCTCCGACTCCGACT
CCTCGGTCGCCGAAAACTGGGTATGTATTTGTTGGTTGATGATTTTTTTGGGTTGGGGTGGTTAGCTCATGGGTG
ATTTTTGGTTTTTGTTTTTTTGGCAGGGAGAAGAGGTCTAGTTGGGTGAATGTTGATGAGGATAGGTTTATGGAT
CTTTGATCCTTTTTCGACCCTGAGGGACTCGGAGGGTATACCCCCGTGCCGGGATTGGTGTTCGTCCGCCCCTAC
TTATGCTTCTCGTTGCTTCTATCTCTCTCTTTGTGTGTACCATAGTGCTCGCTCTCTCACACACTTTGCTCTGCG
CTGTGTCCCTCCCTGTACCATTTACTTTGTATGTGTTTTGTGTCTGTGCACTGTGTACCAACAGTATTGATTCGT
CCTCGTCCTCGGCACGTTCGTCCCGTTGTTCCAAGTTCTCG
Length 5366