Systematic name | CopciAB_370657 | Strain | Coprinopsis cinerea Okayama 7 |
---|---|---|---|
Standard name | - | Synonyms | 370657 |
Uniprot id | Functional description | other AgaK1 protein kinase | |
Location | scaffold_9:700093..703470 | Strand | + |
Gene length (nt) | 3378 | Transcript length (nt) | 2814 |
CDS length (nt) | 630 | Protein length (aa) | 209 |
Strain name | Gene / Protein name |
---|---|
Strain name | Gene / Protein name | Pident | E-value | Bits |
---|---|---|---|---|
0 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Systematic name | - |
---|---|
Protein id | CopciAB_370657.T0 |
Description | other AgaK1 protein kinase |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
---|---|---|---|---|---|
No records |
Prediction | Start | End | Score |
---|---|---|---|
No records |
Domain n | Start | End | Length |
---|---|---|---|
No records |
Accession | Description |
---|---|
No records |
Go id | Term | Ontology |
---|---|---|
No records |
KEGG Orthology |
---|
No records |
COG category | Description |
---|---|
S | other AgaK1 protein kinase |
Class | Family | Subfamily |
---|---|---|
No records |
Group |
---|
No records |
Arrow shows the origin of gene family containing CopciAB_370657.
Sequence id | CopciAB_370657.T0 |
---|---|
Sequence |
>CopciAB_370657.T0 MPCDREITISLASNLKCPDRSQRQHLTFRLTMSDLEVPFPYPDPKWNDYPLEEIMERSIRRYRFWDSPSTLEWFQ ARGYTLYERFSLDRKDRTKLHPSLTVPRMKSNWDSNGKYPYAFIGEYDRIQEAPDLPAYENMGVLAFAQDQQGRH VVIKLVPNESDELRIYELLRAQDIETLKEYCILPILDILTSTTHSFAVMPRRGNLLSVP |
Length | 209 |
Sequence id | CopciAB_370657.T0 |
---|---|
Sequence |
>CopciAB_370657.T0 ATGCCATGTGACCGTGAGATCACAATTTCTTTGGCGTCTAATTTGAAATGTCCTGATCGTTCACAACGCCAGCAC CTTACCTTCCGTTTGACGATGAGCGACCTCGAAGTTCCGTTCCCCTATCCCGATCCAAAGTGGAACGATTACCCT TTGGAAGAGATAATGGAACGGTCAATACGCCGATATCGCTTTTGGGACTCGCCCAGTACCCTCGAGTGGTTTCAA GCTCGTGGATACACGCTCTATGAACGCTTCAGCCTGGACCGGAAAGACCGCACCAAACTCCACCCATCATTAACA GTGCCGCGAATGAAAAGCAACTGGGACAGCAATGGCAAATATCCCTACGCGTTTATCGGCGAATACGATCGCATT CAGGAAGCGCCCGATTTGCCTGCTTATGAAAACATGGGTGTACTGGCGTTTGCTCAAGACCAGCAAGGCCGCCAT GTCGTGATCAAGCTTGTCCCTAACGAGTCGGACGAACTTCGAATTTACGAGCTCCTCCGGGCTCAGGATATCGAA ACCCTCAAGGAATATTGTATTCTTCCCATATTGGATATTCTGACCTCGACTACACACAGCTTCGCTGTGATGCCC AGGCGGGGAAACCTCTTATCTGTCCCATAG |
Length | 630 |
Sequence id | CopciAB_370657.T0 |
---|---|
Sequence |
>CopciAB_370657.T0 CCCTATTCAACCCTTGCTTCCTGCCACCATGTGCGTTCCCAGCGTCAGGCTCAGGGTTCAATGTCTTGGAGAACA TGGCTTGGTCCTGGATGGTTGAACCCTAAGGGCTGGGTGTACGAGCTTCTCACCAATGCTGTTTGTGCTCTCTCG CTTTCTGGGATAGCAACTTTTCAGCTTGTATTGGGCAACATATTCTTGCCTCACGCTCTGCTAATTAAGTCTGCT CAAGGCCAACGAGGGCATCACTTCGCTCTGAAACCGGTCTCTGACTCATCAGATGAACTACGAATATCGCGTTCA GGATCATGATACTCTGACTTCGCCCGCGTATCGCACTAGGTAGAATGGCCTTCCTATCTTCCCTGACATGACAAC ATTCGCACAAGTTCTCGAGTTAGTGCATCAGGGCTCGATGTATTGCTCAGCTGAATGGATGAGTATGACTCTGAA ATGTGGCGAATACCCCTGGGCCTGGCGTTCCTTCACAAGGATCGCACGATTAACATCGATATCTCTCTCGGAAAC GTGGTCATGAAACATCTACTTGCAGCGTCTCTATGATGCGAATCGCTCCTGAACGATAACCGTCGTACTCTCGCT TTGGGTCCCAATAACGAGGACGCGCCCTCTGACTCCGAGTAGGACAGGATCGAACAGATTCTGGACGCCAAATAC AATCGCCTGTATGTGAGCTTGGGGCTCAATTTCTCATCACATTACCTGTTGATGTTCTTGAGCCCTTGACGCATT CATCGAAGTCGATCAGGTGACAGTGGTCGACCAACTAGGCTTAAACGACTATATCTACACGGCTGGCTGGAAAAT CGAGACAGAAGAGCTGGTAGTTGTTTGGATGCAAAGCTATTCTGGCAAGCCCACTTCGCGAGATGATGGACGCAG CGAGCCGGCCCTCTATACCACCCATGCCCACCGAGACAGTCCCTTTTCGTCACCGAGAATCACGATGGCTAGCTG TAGTCCGACTATCCGTAGCACCGCTGATAGGTTCAAGATCGTCACCGAACCCTCCAAGAACCAAGAACCAAGCGG GGGACCACGCAAACTCGATCGCCAAGGTGTAGCTCTATCGGATTCGGTCCTCGCCGCTCGGAAGTGGTGAGCGCG TATGCCATGTGACCGTGAGATCACAATTTCTTTGGCGTCTAATTTGAAATGTCCTGATCGTTCACAACGCCAGCA CCTTACCTTCCGTTTGACGATGAGCGACCTCGAAGTTCCGTTCCCCTATCCCGATCCAAAGTGGAACGATTACCC TTTGGAAGAGATAATGGAACGGTCAATACGCCGATATCGCTTTTGGGACTCGCCCAGTACCCTCGAGTGGTTTCA AGCTCGTGGATACACGCTCTATGAACGCTTCAGCCTGGACCGGAAAGACCGCACCAAACTCCACCCATCATTAAC AGTGCCGCGAATGAAAAGCAACTGGGACAGCAATGGCAAATATCCCTACGCGTTTATCGGCGAATACGATCGCAT TCAGGAAGCGCCCGATTTGCCTGCTTATGAAAACATGGGTGTACTGGCGTTTGCTCAAGACCAGCAAGGCCGCCA TGTCGTGATCAAGCTTGTCCCTAACGAGTCGGACGAACTTCGAATTTACGAGCTCCTCCGGGCTCAGGATATCGA AACCCTCAAGGAATATTGTATTCTTCCCATATTGGATATTCTGACCTCGACTACACACAGCTTCGCTGTGATGCC CAGGCGGGGAAACCTCTTATCTGTCCCATAGCACGTAGCGCTAATCATTTCACTCTAGATGGGGCTCGGGGCCAG TCTTCCCAATGTGGGCCACGTTGTCGGACGTCGTCGAGTTCATCAGAGCAATGCTTAAAGGATTGGCCTTTCTGC ACAAGAACCTCATCGTCCATAGGGACATGTCCACTGGAAATGCTGTCATCAACCAATTCTCGGGCCATTCTAACC CGCACGGAAAAGACATCCGTCACAAGCTAAGGCGTGACGGCCAGGCACTGTACGCACTCATCGACTACAACATCT CTATGATGGTCCCCCCAGGGATGGAACCGTCGGAATTCCGGCTGCCTTACGTGTCCTGGGATGGTGTATACGGCG TTCCGGACGTCGCCCAGGGTGAACCAGACTACGATCCTTTCGCCTGGGACGTTGGCGCCTTGGGGGCGGTCCTCT GCGAGTTCTTCCAGCATGTGGAGACCTCCCTCTACTCGCACCCTTGTTCGACACCATGACCAGATGGGACATCCC TCAAAGGTTCACAGCCGCGCAAGCACTCGAATTCTTCGAAGCGGAGATCTCTTCAGTGGATCCGAAGCACCTCCA AAAGCATGTCGAATATCCTGAAAGCAGACCTGGCCATTTTGAAGAGTGCGACCGTTGGCAGGGCGTCCCTGAAGA GATGGCTGTCCGGTGGAGGAACTTCAGAAGCCCGAAGCTTAGTCGTTGGATGATTTTTTTGAGATGCATGTGTAA CCCGCCGGATGGGATATGCGCCGCGCTTGTGAGGATGATACGTAGGGGATATCGATTTATCGTCGGCCTTCTTGG TGTGGATAGGCTCAAGGGCCTCTTAGAGTTATAGGCTCCCTTCCGTCGTCTTACCCGCGTCTTTCCCTGCGCTAA TAATGGCCAGTAGTTCGAGTGGGATTGCGTCAGTGAACGAAGTTTTCGGGAGGCCCATGGAGCTGACTTGATTTG TAGTTTCGCCATTTTAACACTCAATCTACAAGGCAACGGGTGATGTATTTACTATATCGACTAGTACCAGTACAG AACTAACCCTGCACTCCAAAGATTTTCTGTACCCCGTCG |
Length | 2814 |
Sequence id | CopciAB_370657.T0 |
---|---|
Sequence |
>CopciAB_370657.T0 CCCTATTCAACCCTTGCTTCCTGCCACCATGTGCGTTCCCAGCGTCAGGCTCAGGGTTCAATGTCTTGGAGAACA TGGCTTGGTCCTGGATGGTTGAACCCTAAGGGCTGGGTGTACGAGCTTCTCACCAATGCTGTTTGTGCTCTCTCG CTTTCTGGGATAGCAACTTTTCAGCTTGTATTGGGCAACATATTCTTGCCTCACGCTCTGCTAATTAAGTCTGCT CAAGGCCAACGAGGGCATCACTTCGCTCTGAAACCGGTCTCTGACTCATCAGATGAACTACGAATATCGCGTTCA GGATCATGATACTCTGACTTCGCCCGCGTATCGCACTAGGTGCGTTTGTTTACTCAGTCTCTGGAGTTATCGTTA TCTGACCCAAAATCTAGGTAGAATGGCCTTCCTATCTTCCCTGACATGACAACATTCGCACAAGTTCTCGAGTTA GTGCATCAGGGCTCGATGTATTGCTCAGCTGAATGGATGAGTATGACTCTGAAATGTGGCGAATACCCCTGGGCC TGGCGTTCCTTCACAAGGATCGCACGATTAACATCGTAAGCTCCGTTTCTTCCTTATCTCTTCACTCAAGCACTG ACTGAAATATACAGGATATCTCTCTCGGAAACGTGGTCATGAAACATCTACTTGCAGCGTCTCTATGATGCGAAT CGCTCCTGAACGATAACCGTCGTACTCTCGCTTTGGGTCCCAATAACGAGGACGCGCCCTCTGACTCCGAGTAGG ACAGGATCGAACAGATTCTGGACGCCAAATACAATCGCCTGTATGTGAGCTTGGGGCTCAATTTCTCATCACATT ACCTGTTGATGTTCTTGAGCCCTTGACGCATTCATCGAAGTCGATCAGGTGACAGTGGTCGACCAACTAGGCTTA AACGACTATATCTACACGGCTGGCTGGAAAATCGAGACAGAAGAGCTGGTAGTTGTTTGGATGCAAAGCTATTCT GGCAAGCCCACTTCGCGAGATGATGGACGCAGCGAGCCGGCCCTCTATACCACCCATGCCCACCGGTAATCTGAG TTTACTTTCCCTAAAGCTCTCTAATTTCCAATATCCAATTCTTGTGCAGAGACAGTCCCTTTTCGTCACCGAGAA TCACGATGGCTAGCTGTAGTCCGACTATCCGTAGCACCGCTGATAGGTTCAAGATCGTCACCGAACCCTCCAAGA ACCAAGAACCAAGCGGTACGCGACACCCGCTCTAGATTGGGCCCTTCTGTATTGAACACACAAACGATTTCAGGG GGACCACGCAAACTCGATCGCCAAGGTGTAGCTCTATCGGATTCGGTCCTCGCCGCTCGGAAGTGGTGAGCGCGT ATGCCATGTGACCGTGAGATCACAATTTCTTTGGCGTCTAATTTGAAATGTCCTGGTTTGTCAAATCCTCGAGTC CTCCATACCATCTCTTGAACTCCCTCCAGATCGTTCACAACGCCAGCACCTTACCTTCCGTTTGACGATGGTGCG CGACACCTCTCACCACTCCCCTGTAACTTTCCCTGACGTTCGTAGCAGAGCGACCTCGAAGTTCCGTTCCCCTAT CCCGATCCAAAGTGGAACGATTACCCTTTGGAAGAGATAATGGAACGGTCAATACGCCGATATCGCTTTTGGGAC TCGCCCAGTACCCTCGAGTGGTTTCAAGCTCGTGGATACACGCTCTATGAACGCTTCAGCCTGGACCGGAAAGAC CGCACCAAACTCCACCCATCATTAACAGTGCCGCGAATGAAAAGCAACTGGGACAGCAATGGCAAATATCCCTAC GCGTTTATCGGCGAATACGATCGCATTCAGGAAGCGCCCGATTTGCCTGCTTATGAAAACATGGTGAGTACGTAT ATGGTTCACCGCGCATATAATTCTCACCCCGCTTTCATAACAGGGTGTACTGGCGTTTGCTCAAGACCAGCAAGG CCGCCATGTCGTGATCAAGCTTGTCCCTAACGAGTCGGACGAACTTCGAATTTACGAGCTCCTCCGGGCTCAGGA TATCGAAACCCTCAAGGAATATTGTATTCTTCCCATATTGGATATTCTGACCTCGACTACACACAGCTTCGCTGT GATGCCCAGGCGGGGAAACCTCTTATCTGTCCCATAGCACGTAGCGCTAATCATTTCACTCTAGATGGGGCTCGG GGCCAGTCTTCCCAATGTGGGCCACGTTGTCGGACGTCGTCGAGTTCATCAGAGCAATGCTTAAAGTACGCCGCC GTTTGTGGTCGTTTGGTGCATACATTCTGAGGTCCATCCACGTACGAAGGGATTGGCCTTTCTGCACAAGAACCT CATCGTCCATAGGGTACGTGCGCCCCAATCATCTCTCGTCACCAGAGCGTACGAGCCAACGCTGACACATTTGCA CGCATAGGACATGTCCACTGGAAATGCTGTCATCAACCAATTCTCGGGCCATTCTAACCCGCACGGAAAAGACAT CCGTCACAAGCTAAGGCGTGACGGCCAGGCACTGTACGCACTCATCGACTACAACATCTCTATGATGGTCCCCCC AGGGATGGAACCGTCGGAATTCCGGCTGCCTTACGTGTCCTGGGATGGTGTATACGGCGTTCCGGACGTCGCCCA GGGTGAACCAGACTACGATCCTTTCGCCTGGGACGTTGGCGCCTTGGGGGCGGTCCTCTGCGAGTTCTTCCAGGT AAGGACGCAAAACTCCTACCCCACATCACGCTAATCCCTGAATCTGTCCTTAGCATGTGGAGACCTCCCTCTACT CGCACCCTTGTTCGACACCATGACCAGATGGGACATCCCTCAAAGGTTCACAGCCGCGCAAGCACTCGAATTCTT CGAAGCGGAGATCTCTTCAGTGGATCCGAAGCACCTCCAAAAGCATGTCGAATATCCTGAAAGCAGACCTGGCCA TTTTGAAGAGTGCGACCGTTGGCAGGGCGTCCCTGAAGAGATGGCTGTCCGGTGGAGGAACTTCAGAAGCCCGAA GCTTAGTCGTTGGATGATTTTTTTGAGATGCATGTGTAACCCGCCGGATGGGATATGCGCCGCGCTTGTGAGGAT GATACGTAGGGGATATCGATTTATCGTCGGCCTTCTTGGTGTGGATAGGCTCAAGGGCCTCTTAGAGTTATAGGC TCCCTTCCGTCGTCTTACCCGCGTCTTTCCCTGCGCTAATAATGGCCAGTAGTTCGAGTGGGATTGCGTCAGTGA ACGAAGTTTTCGGGAGGCCCATGGAGCTGACTTGATTTGTAGTTTCGCCATTTTAACACTCAATCTACAAGGCAA CGGGTGATGTATTTACTATATCGACTAGTACCAGTACAGAACTAACCCTGCACTCCAAAGATTTTCTGTACCCCG TCG |
Length | 3378 |