| Systematic name | CopciAB_373470 | Strain | Coprinopsis cinerea Okayama 7 |
|---|---|---|---|
| Standard name | CDC28 | Synonyms | 373470 |
| Uniprot id | Functional description | Belongs to the protein kinase superfamily | |
| Location | scaffold_3:3276385..3278621 | Strand | + |
| Gene length (nt) | 2237 | Transcript length (nt) | 1362 |
| CDS length (nt) | 897 | Protein length (aa) | 298 |
| Strain name | Gene / Protein name |
|---|---|
| Histoplasma mississippiense | CDC2 |
| Candida albicans | CDC28 |
| Saccharomyces cerevisiae | YBR160W_CDC28 |
| Schizosaccharomyces pombe | cdc2 |
| Neurospora crassa | cdc28 |
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Pleurotus eryngii ATCC 90797 | Pleery1_1439404 | 87.3 | 4.951E-175 | 541 |
| Agrocybe aegerita | Agrae_CAA7266738 | 86.6 | 1.141E-174 | 540 |
| Pleurotus ostreatus PC15 | PleosPC15_2_185666 | 86.9 | 2.28E-173 | 536 |
| Schizophyllum commune H4-8 | Schco3_2629921 | 86.9 | 3.312E-172 | 533 |
| Lentinula edodes NBRC 111202 | Lenedo1_1136111 | 84.2 | 3.201E-171 | 530 |
| Lentinula edodes W1-26 v1.0 | Lentinedodes1_1684 | 84.2 | 3.176E-171 | 530 |
| Hypsizygus marmoreus strain 51987-8 | Hypma_RDB21937 | 89.6 | 8.367E-171 | 529 |
| Pleurotus ostreatus PC9 | PleosPC9_1_114067 | 86.8 | 7.869E-168 | 520 |
| Ganoderma sp. 10597 SS1 v1.0 | Gansp1_110915 | 83.1 | 2.301E-165 | 513 |
| Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_195370 | 80.6 | 2.23E-163 | 507 |
| Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_114985 | 80.6 | 2.324E-163 | 507 |
| Auricularia subglabra | Aurde3_1_1244331 | 77.7 | 2.263E-154 | 482 |
| Flammulina velutipes | Flave_chr07AA00685 | 74.8 | 4.532E-149 | 466 |
| Lentinula edodes B17 | Lened_B_1_1_7478 | 71.1 | 3.631E-141 | 443 |
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Systematic name | CDC28 |
|---|---|
| Protein id | CopciAB_373470.T0 |
| Description | Belongs to the protein kinase superfamily |
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| CDD | cd07835 | STKc_CDK1_CdkB_like | - | 4 | 289 |
| Pfam | PF00069 | Protein kinase domain | IPR000719 | 4 | 289 |
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
| Accession | Description |
|---|---|
| IPR000719 | Protein kinase domain |
| IPR017441 | Protein kinase, ATP binding site |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR008271 | Serine/threonine-protein kinase, active site |
| Go id | Term | Ontology |
|---|---|---|
| GO:0004672 | protein kinase activity | MF |
| GO:0005524 | ATP binding | MF |
| GO:0006468 | protein phosphorylation | BP |
| KEGG Orthology |
|---|
| K04563 |
| COG category | Description |
|---|---|
| T | Belongs to the protein kinase superfamily |
| Class | Family | Subfamily |
|---|---|---|
| No records | ||
| Group |
|---|
| No records |
Arrow shows the origin of gene family containing CopciAB_373470.
| Sequence id | CopciAB_373470.T0 |
|---|---|
| Sequence |
>CopciAB_373470.T0 MDRYAKIEKVGEGTYGVVYKARDTSTNTIVALKKIRLEAEDEGVPSTAIREISLLKELKDDNIVKLLDIVHADQK LYLVFEFLDVDLKRFIETGNQNRSPITPALVKKFTHQLNSGLLYCHSHRILHRDLKPQNLLIDKHNNLKLADFGL ARAFGIPMRTYTHEVVTLWYRAPEVLLGSRHYSTAIDMWSVGCIFAEMAMQGAPLFPGDSEIDQIFKIFRLLGTP NEDIWPGVSTLPDYKPTFPNWSRQDLAKAVPTLDEAGIDMLKRTLTYDSAKRLSAKRALVHPYFADYNNNYKA |
| Length | 298 |
| Sequence id | CopciAB_373470.T0 |
|---|---|
| Sequence |
>CopciAB_373470.T0 ATGGATCGATACGCAAAAATCGAAAAAGTCGGCGAAGGTACCTATGGCGTTGTTTATAAGGCAAGAGATACAAGT ACGAATACCATCGTCGCCCTGAAGAAGATCAGGCTCGAGGCTGAAGACGAGGGCGTTCCCAGTACTGCCATTCGT GAGATCAGCTTGCTCAAAGAGTTGAAGGATGACAACATCGTCAAGCTGCTGGATATCGTTCATGCGGACCAGAAA CTGTACCTCGTTTTCGAGTTCTTGGACGTCGATCTCAAGAGGTTCATCGAAACTGGGAACCAGAACCGCTCTCCC ATTACTCCTGCGCTCGTCAAGAAATTCACCCACCAACTGAACTCTGGCCTTCTCTACTGTCACTCGCACCGAATT CTCCACCGAGATCTGAAGCCCCAGAACCTCCTGATCGATAAACACAACAACCTCAAACTAGCTGATTTCGGTCTT GCGCGGGCTTTTGGTATCCCCATGCGAACCTATACGCATGAGGTCGTTACTCTCTGGTATCGCGCACCCGAGGTC CTCCTTGGTTCGCGCCACTACTCAACCGCTATCGACATGTGGTCCGTTGGCTGCATCTTTGCAGAGATGGCCATG CAGGGCGCTCCTCTCTTCCCTGGCGATTCAGAGATCGACCAGATCTTCAAGATCTTCAGGCTCTTGGGTACCCCC AACGAGGACATCTGGCCTGGTGTCAGCACGCTTCCCGATTACAAACCTACCTTCCCTAACTGGAGCCGGCAAGAC CTTGCCAAGGCCGTTCCCACTCTGGACGAGGCGGGCATCGACATGTTGAAGCGCACCCTCACCTACGATTCGGCC AAGCGCCTCTCTGCCAAGCGCGCACTCGTCCATCCATATTTCGCCGACTACAATAACAACTACAAGGCATGA |
| Length | 897 |
| Sequence id | CopciAB_373470.T0 |
|---|---|
| Sequence |
>CopciAB_373470.T0 AGCCTCTCTTTCACCTCGACAGCCATCTTCTTCAACCCTTTTCTTTCTCAACCACATTTCTCGACACCGACGAAA CGCCACCACGACGGCCAACAACCCAGTAGACCGCCATCGACGACGACCAGCAGCCTTTGGAAAGGCTCCAGAATC TTGGCTCTCTAGCCCCGTTTTGGCATTTTGAAGACTCGCTACCGACCTCGACATCGCTCAAGACGACCCCAACGA CCCGCACACAACGAAACCGCCTTTTGCATTGAACCATGGATCGATACGCAAAAATCGAAAAAGTCGGCGAAGGTA CCTATGGCGTTGTTTATAAGGCAAGAGATACAAGTACGAATACCATCGTCGCCCTGAAGAAGATCAGGCTCGAGG CTGAAGACGAGGGCGTTCCCAGTACTGCCATTCGTGAGATCAGCTTGCTCAAAGAGTTGAAGGATGACAACATCG TCAAGCTGCTGGATATCGTTCATGCGGACCAGAAACTGTACCTCGTTTTCGAGTTCTTGGACGTCGATCTCAAGA GGTTCATCGAAACTGGGAACCAGAACCGCTCTCCCATTACTCCTGCGCTCGTCAAGAAATTCACCCACCAACTGA ACTCTGGCCTTCTCTACTGTCACTCGCACCGAATTCTCCACCGAGATCTGAAGCCCCAGAACCTCCTGATCGATA AACACAACAACCTCAAACTAGCTGATTTCGGTCTTGCGCGGGCTTTTGGTATCCCCATGCGAACCTATACGCATG AGGTCGTTACTCTCTGGTATCGCGCACCCGAGGTCCTCCTTGGTTCGCGCCACTACTCAACCGCTATCGACATGT GGTCCGTTGGCTGCATCTTTGCAGAGATGGCCATGCAGGGCGCTCCTCTCTTCCCTGGCGATTCAGAGATCGACC AGATCTTCAAGATCTTCAGGCTCTTGGGTACCCCCAACGAGGACATCTGGCCTGGTGTCAGCACGCTTCCCGATT ACAAACCTACCTTCCCTAACTGGAGCCGGCAAGACCTTGCCAAGGCCGTTCCCACTCTGGACGAGGCGGGCATCG ACATGTTGAAGCGCACCCTCACCTACGATTCGGCCAAGCGCCTCTCTGCCAAGCGCGCACTCGTCCATCCATATT TCGCCGACTACAATAACAACTACAAGGCATGAACGAGCAAATCCACAAGTGTCACTGTTCCCCTTCTGCCTCACA TGTCGAAATAATTTGGGCTTTAGGACCTCGGTTTCGGTATCGAGTGTCTCTTTTCATCACAGTTATGAAGATATA TATATATAAGTTGTGCATATCGCTTTCTGATCGCTGTCCATCCCATCGTACTCATATCATCGCAAATGCATGTTT GTGATCACTGTC |
| Length | 1362 |
| Sequence id | CopciAB_373470.T0 |
|---|---|
| Sequence |
>CopciAB_373470.T0 AGCCTCTCTTTCACCTCGACAGCCATCTTCTTCAACCCTTTTCTTTCTCAACCACATTTCTCGACACCGACGAAA CGCCACCACGACGGCCAACAACCCAGTAGACCGCCATCGACGACGACCAGCAGCCTTTGGAAAGGCTCCAGAATC TTGTCGGTCTCTTTCCTGGAATCTTGGTTGCTGTTCATCGCCTCTGATCACCGTTCAGGGCTCTCTAGCCCCGTT TTGGCATTTTGAAGACTCGCTACCGACCTCGACATCGCTCAAGACGACCCCAACGACCCGCACACAACGAAACCG CCTTTTGCATTGAACCATGGATCGGTGGGTGCGACGTAGGCGCTGGATGAACGCAACGAGCTGATTGTCATCATC CATCTCTGTGGGATTCATTGGTCGCAGATACGCAAAAATCGAAAAAGTCGGTATGTGGCAGGTTGTCTGCTGGGA GACGTATAGACCACCCACCCTCGAGCGTCCGCACTGTAGGCGAAGGTGCGTAATTGGGGCCTTTCTTCACCAAAT CATCACGCTGACACCACGTTGTCTTGCTCGTGCATGATGGCAGGTACCTATGGCGTTGTTTATAAGGCAAGAGAT ACAAGTACGAATACCATCGTCGCCCTGAAGAAGATCAGGCTCGAGGCTGAAGACGAGGGCGTTCCCAGTACTGCC ATTCGTGAGATCAGCTTGCTCAAAGAGTTGAAGGATGACAACATCGTCAAGTCCGTGGGCTTTTAGTGTTTTCAT GGAGACGAGACTCTACTGGCATGGGATCGTTACTGACGGTATTCCTGATTCTCAGGCTGCTGGATATCGTTCATG CGGACCAGAAACTGTACCTCGTTTTCGAGTTCTTGGACGTCGATCTCAAGAGGTTCATCGAAACTGGGAACCAGA ACCGCTCTCCCATTACTCCTGCGCTCGTCAAGGTGGGTTCCCGGTGCGGCGATTTCGGTTTATTTCTTCTCCTCC CCCTGTCCCGAGGTCATGTGCCGCGCGCGGGCGCCCATAATTGCACGCGTCCGATTCACGCGTCTCGACGCGATG GGGCTATTTTTTCCACTTCCCCTTTGCTTTATCGTCTTCGGGCCACTCGTTTTCAGGCCGTCTGACACAGGACGA GAGCCTGTAATTTAAATTGGCTCGCGACTTTATGACATAAAGTCACGTGGCCTTACCGCGTCGTCGTCCTCGAAC TGGAGTCCATCTCACCGCCGCTTTTCTTTGCTAGAAATTCACCCACCAACTGAACTCTGGCCTTCTCTACTGTCA CTCGCACCGAATTCTCCACCGAGATCTGAAGCCCCAGAACCTCCTGATCGATAAACACAACAACCTCAAACTAGC TGATTTCGGTCTTGCGCGGGCTTTTGGTATCCCCATGCGAACCTATACGCATGAGGTAAGGGTCCCTCTCAACAG GGAATTCTGTTAGACTCACCTATGTGTAGGTCGTTACTCTCTGGTATCGCGCACCCGAGGTCCTCCTTGGTTCGC GCCACTACTCAACCGCTATCGACATGTGGTCCGTTGGCTGCATCTTTGCAGAGATGGCCATGCAGGGCGCTCCTC TCTTCCCTGGCGATTCAGAGATCGACCAGATCTTCAAGATCTTCAGGTAAGGAACGTTTTCATTAGAAAGTAGAA CGTATTGAACGGGTGACGATGTCAGGCTCTTGGGTACCCCCAACGAGGACATCTGGCCTGGTGTCAGCACGCTTC CCGATTACAAACCTACCTTCCCTAACTGGAGCCGGCAAGACCTTGCCAAGGCCGTTCCCACTCTGGACGAGGCGG GCATCGACATGTTGAAGGTGAGTTCCACGATTCAGTCCATCAATCGACGTCGATCGACCTGTTTGGCTGCCAACC CAGCGCACCCTCACCTACGATTCGGCCAAGCGCCTCTCTGGTATGCTCGTCTCAATTTTTGCGATCTGCGGTTGC GGGTAACTGACATCCCTACGAAGCCAAGCGCGCACTCGTCCATCCATATTTCGCCGACTACAATAACAACTACAA GGCATGAACGAGCAAATCCACAAGTGTCACTGTTCCCCTTCTGCCTCACATGTCGAAATAATTTGGGCTTTAGGA CCTCGGTTTCGGTATCGAGTGTCTCTTTTCATCACAGTTATGAAGATATATATATATAAGTTGTGCATATCGCTT TCTGATCGCTGTCCATCCCATCGTACTCATATCATCGCAAATGCATGTTTGTGATCACTGTC |
| Length | 2237 |