Systematic name | CopciAB_375095 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | exgD | Synonyms | 375095 |
Uniprot id | Functional description | Exo-beta-1,3-glucanase | |
Location | scaffold_4:662816..665946 | Strand | + |
Gene length (nt) | 3131 | Transcript length (nt) | 2688 |
CDS length (nt) | 1101 | Protein length (aa) | 366 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Grifola frondosa | Grifr_OBZ71933 | 44.6 | 3.915E-92 | 305 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | exgD |
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Protein id | CopciAB_375095.T0 |
Description | Exo-beta-1,3-glucanase |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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No records |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR017853 | Glycoside hydrolase superfamily |
Go id | Term | Ontology |
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No records |
KEGG Orthology |
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K01210 |
COG category | Description |
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G | Exo-beta-1,3-glucanase |
Class | Family | Subfamily |
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GH | GH5 | GH5_9 |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_375095.
Sequence id | CopciAB_375095.T0 |
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Sequence |
>CopciAB_375095.T0 MGLANAQRALNYIRIIAEFISQPEWRDVVPMFGIINEPLLEAIGPDSLRSFYVAAHGLIRSITGYGAGYGPWIGI HDGFYGADSWRDFMRGGDRIFMDMHPYFAFNGGQTRVDPIANGTGSGAGGVWPGIACQRWNALFSNSRSEFGVTV AGEWSNGFNDCGLFLNGVGLPATYAGNCNLWQDSTNWDEATKAGLRKFATASMDALDSWFFWTWKIGNSTRGIVE APLWSYQLGLEGGWIPRDPRTAYGTCSKLGSPLTPVKGPYPSWMTGGDGAGPPRDARSYPWPPSMIAGGGAPTIV PHYAATGIIATLPPPTYTASDGHTISSGNGWFNTQDTAPAPTPIQGCVYPDAWNPKPTAVSSQCLA |
Length | 366 |
Sequence id | CopciAB_375095.T0 |
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Sequence |
>CopciAB_375095.T0 ATGGGACTTGCAAACGCTCAACGAGCTCTGAATTACATACGGATAATCGCCGAATTTATCAGCCAACCGGAGTGG AGAGACGTTGTTCCTATGTTTGGTATCATCAACGAACCATTGTTAGAGGCCATTGGCCCGGATTCCTTACGCAGT TTCTATGTCGCTGCCCATGGATTGATCAGGAGTATCACTGGTTACGGGGCTGGATATGGGCCGTGGATTGGCATT CACGATGGATTCTATGGGGCTGACTCGTGGAGAGACTTCATGCGAGGCGGTGATAGAATCTTCATGGACATGCAC CCCTATTTTGCCTTCAACGGAGGACAGACTAGGGTGGACCCGATTGCTAATGGAACGGGTTCTGGGGCAGGTGGC GTCTGGCCTGGTATAGCGTGCCAGCGATGGAATGCGTTGTTCTCTAACAGCCGTTCGGAATTCGGAGTCACCGTA GCGGGCGAATGGAGTAACGGCTTTAACGACTGTGGTCTTTTTTTAAACGGGGTTGGCCTACCAGCCACCTACGCT GGAAATTGCAATCTCTGGCAGGACTCCACGAACTGGGATGAGGCGACGAAGGCAGGCCTTCGCAAGTTCGCAACT GCAAGTATGGATGCCCTGGATTCATGGTTCTTTTGGACATGGAAGATCGGAAACTCAACCAGGGGTATCGTTGAG GCACCGTTGTGGTCATACCAACTGGGACTCGAAGGAGGTTGGATTCCGCGAGACCCTCGCACCGCCTACGGGACG TGCAGCAAGCTCGGTTCTCCTTTGACGCCGGTCAAAGGTCCCTATCCCTCTTGGATGACCGGTGGTGATGGCGCA GGACCTCCTCGAGATGCAAGAAGCTACCCCTGGCCGCCCTCCATGATCGCCGGGGGAGGAGCGCCAACAATTGTT CCGCACTATGCAGCTACTGGCATTATTGCGACCCTACCGCCACCGACATACACCGCAAGTGACGGACATACAATT TCGTCTGGAAATGGCTGGTTCAATACGCAAGACACGGCTCCCGCACCGACCCCGATCCAGGGTTGCGTCTACCCC GACGCTTGGAACCCCAAACCGACCGCAGTATCTTCCCAATGTTTGGCGTAG |
Length | 1101 |
Sequence id | CopciAB_375095.T0 |
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Sequence |
>CopciAB_375095.T0 AGGTCTTTTTCCAACCTGAGCGTTCACCTGGGCTCCCTCTCTGGATTTGAGACCTACAGATGGCGGGCTAACCTT CACTACCTCGAAAAGTGTCTCGATTGTCGAGTTTCTTCGTGAAGCCACGGTGGATGACTGGGGATTGGCCAATAT CCATGAAAGCCGCTGGTGGGCTGTGGCTGACGAAAATCGCCGCGCTACATATAACCTTGGCAGTGTGCCAGCAGG AGGTGTCTATTATTACCTCTGCATCGACCTGGGACTATGGCTAGTTCGTCCGACACCCTCGTCAATCCAACCGAC TCCTCGTACGATAACGCAGATCCGATTAACGGCCAAAAACAATGTCACCACATCCCACCGTCGCTGCTGCCATCT AGTCGCCAATCTCAGGACCATCTCTCCCCTTTGAAAAACAAAAGCCATGGAATCAGTCTAACCGACCCGAAAACG GCATCGTTTCGGAATCCCCGAAAAGCACTCATTGCCCTGGTTTCTGTAGTTTCTCTTCTCTCTGTCCTTGCTGTC GTTGTGCCAGTGGGATTGCTTGTTGGGAGGTCGAAACGAGATGGGAGTGACTTCGACAACAACAATCAATCGCAA TTGCCTGCGTCACCTTCGGCGGTTGCGAACTTCGCCATCTCCGGAGGCGATGGGTCCACGGTAACCACCGACGAT GGGTCTACTTTTATCTACTCCAATAGGTTCGGGGGCTTCTAACTCTGACTCGCTAGAAGCGAACAAATCGAGGGT GTGCGCCTACTGTGCCCCACCTTCGACATTATCTTCGACTAGACCTAACTTAAATGCCCGCTGCTTCTAGGGGTT TCCGATCCTGACAATCCTTACAACAATGATGCGCAGCCTAACTCTTGGACTCCACCTCTGAACCAAAGTTGGGAC TTCAACAAAGACAAGATCTTTGGTGTCAACCTAGGCGGCCTTTTCGTTCTGGAACCTTTCATTACCCCATCCTTG TTTCAGCGGTATCCAGGCGCTATCGATGAGTGGTCTCTGAGCGTATTGATGGCGGCCGACGCGGCCAACGGAGGA TTGGGTCAAATTGAGCATCATTACAATACCTTCATTACAGAGAAGGACATCGCTGATATTGCGGGAGCAGGACTG AACTGGGTGCGACTGCCAATTCCGTTCTGGGCCATTGAGACATGGGATGGCGAACCATTCCTTGCGAAAACGAGC TGGAAATACATCCTCCGTCTCTTGAAATGGTGTCGAAAGTATGGTATTCGCGTCAATCTTGATCTTCATCAGTAC CCGGTTCTCAAAATGGGTACAACCATTCTGGACGATACGGACAAGTGAACTTCCTTCGGGGCATCATGGGACTTG CAAACGCTCAACGAGCTCTGAATTACATACGGATAATCGCCGAATTTATCAGCCAACCGGAGTGGAGAGACGTTG TTCCTATGTTTGGTATCATCAACGAACCATTGTTAGAGGCCATTGGCCCGGATTCCTTACGCAGTTTCTATGTCG CTGCCCATGGATTGATCAGGAGTATCACTGGTTACGGGGCTGGATATGGGCCGTGGATTGGCATTCACGATGGAT TCTATGGGGCTGACTCGTGGAGAGACTTCATGCGAGGCGGTGATAGAATCTTCATGGACATGCACCCCTATTTTG CCTTCAACGGAGGACAGACTAGGGTGGACCCGATTGCTAATGGAACGGGTTCTGGGGCAGGTGGCGTCTGGCCTG GTATAGCGTGCCAGCGATGGAATGCGTTGTTCTCTAACAGCCGTTCGGAATTCGGAGTCACCGTAGCGGGCGAAT GGAGTAACGGCTTTAACGACTGTGGTCTTTTTTTAAACGGGGTTGGCCTACCAGCCACCTACGCTGGAAATTGCA ATCTCTGGCAGGACTCCACGAACTGGGATGAGGCGACGAAGGCAGGCCTTCGCAAGTTCGCAACTGCAAGTATGG ATGCCCTGGATTCATGGTTCTTTTGGACATGGAAGATCGGAAACTCAACCAGGGGTATCGTTGAGGCACCGTTGT GGTCATACCAACTGGGACTCGAAGGAGGTTGGATTCCGCGAGACCCTCGCACCGCCTACGGGACGTGCAGCAAGC TCGGTTCTCCTTTGACGCCGGTCAAAGGTCCCTATCCCTCTTGGATGACCGGTGGTGATGGCGCAGGACCTCCTC GAGATGCAAGAAGCTACCCCTGGCCGCCCTCCATGATCGCCGGGGGAGGAGCGCCAACAATTGTTCCGCACTATG CAGCTACTGGCATTATTGCGACCCTACCGCCACCGACATACACCGCAAGTGACGGACATACAATTTCGTCTGGAA ATGGCTGGTTCAATACGCAAGACACGGCTCCCGCACCGACCCCGATCCAGGGTTGCGTCTACCCCGACGCTTGGA ACCCCAAACCGACCGCAGTATCTTCCCAATGTTTGGCGTAGCTTTCTCGTGTATCAGGTTTGTCCGGTGCACACC TCCGATGCACTATGGCGAACATGTTTCCTGATGGGTACACCCACAATCGATGTCACTGCCGTCATACACGCGTTT TGGTGAACAGAGCCTGGTAGTCACAGCCCTTTCTCTTTCTCGTACTGATCCGGTATTTATAGCCCTCAATTCAGC TCATTCTGTTTCAAACGCAGACCTTCCCCCTTCAGGGGTAATTTACACGTTATGCTTGCGTTC |
Length | 2688 |
Sequence id | CopciAB_375095.T0 |
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Sequence |
>CopciAB_375095.T0 AGGTCTTTTTCCAACCTGAGCGTTCACCTGGGCTCCCTCTCTGGATTTGAGACCTACAGATGGCGGGCTAACCTT CACTACCTCGAAAAGTGTCTCGATTGTCGAGTTTCTTCGTGAAGCCACGGTGGATGACTGGGGATTGGCCAATAT CCATGAAAGCCGCTGGTGGGCTGTGGCTGACGAAAATCGCCGCGCTACATATAACCTTGGCAGTGTGCCAGCAGG AGGTGTCTATTATTACCTCTGCATCGACCTGGGACTATGGCTAGTTCGTCCGACACCCTCGTCAATCCAACCGAC TCCTCGTACGATAACGCAGATCCGATTAACGGCCAAAAACAATGTCACCACATCCCACCGTCGCTGCTGCCATCT AGTCGCCAATCTCAGGACCATCTCTCCCCTTTGAAAAACAAAAGCCATGGAATCAGTCTAACCGACCCGAAAACG GCATCGTTTCGGAATCCCCGAAAAGCACTCATTGCCCTGGTTTCTGTAGTTTCTCTTCTCTCTGTCCTTGCTGTC GTTGTGCCAGTGGGATTGCTTGTTGGGAGGTCGAAACGAGATGGGAGTGACTTCGACAACAACAATCAATCGCAA TTGCCTGCGTCACCTTCGGCGGTTGCGAACTTCGCCATCTCCGGAGGCGATGGGTCCACGGTAACCACCGACGAT GGGTCTACTTTTATCTACTCCAATAGGTTCGGGGGCTTCTGTAGGTGTCATTGGATCTCCTCATGTCAAGCACCC AAAAACCTGTTCGACCTTCCGAACTAGAACTCTGACTCGCTAGAAGCGAACAAATCGAGGGTGTGCGCCTACTGT GCCCCACCTTCGACATTATCTTCGACTAGACCTAACTTAAATGCCCGCTGCTTCTAGGGGTTTCCGATCCTGACA ATCCTTACAACAATGATGCGCAGCCTAACTCTTGGACTCCACCTCTGAACCAAAGTTGGGACTTCAACAAAGACA AGATCTTTGGGTGCGTACGCTCTTCTTTCTTTTTCTAGACGCATTGTGTTGAGTGGCGCTCTAGTGTCAACCTAG GCGGCCTTTTCGTTCTGGAACCTTTCATTACCCCATCCTTGTTTCAGCGGTATCCAGGCGCTATCGATGAGTGGT CTCTGAGCGTATTGATGGCGGCCGACGCGGCCAACGGAGGATTGGGTCAAATTGAGCATCATTACAATACCTTCA TTGTAAGATCTCCTCGTTACCGCTCCCAATCCTGTGATTCTGACATCCGTATTATCAGACAGAGAAGGACATCGC TGATATTGCGGGAGCAGGACTGAACTGGGTGCGACTGCCAATTCCGTTCTGGGCCATTGAGACATGGGATGGCGA ACCATTCCTTGCGAAAACGAGCTGGAAGTAGGTTCTTAACTACACCTTTCACGGATCTAAATGACTTCATTATTT TCTCAAGATACATCCTCCGTCTCTTGAAATGGTGTCGAAAGTATGGTATTCGCGTCAATCTTGATCTTCATCAGT ACCCGGTTCTCAAAATGGTGAGCATTCTATCCCAATAGGTGGCCCATCCCTTTTTGACTCCAATCCCAAAGGGTA CAACCATTCTGGACGATACGGACAAGTGAACTTCCTTCGGGGCATCATGGGACTTGCAAACGCTCAACGAGCTCT GAATTACATACGGATAATCGCCGAATTTATCAGCCAACCGGAGTGGAGAGACGTTGTTCCTATGTTTGGTATCAT CAACGAACCATTGTTAGAGGCCATTGGCCCGGATTCCTTACGCAGTTTGTTCGTCACATCCCCTATCGCCGATCC TCTTTACTGATCGGGTTCTCGAAGCTATGTCGCTGCCCATGGATTGATCAGGAGTATCACTGGTTACGGGGCTGG ATATGGGCCGTGGATTGGCATTCACGATGGATTCTATGGGGCTGACTCGTGGAGAGACTTCATGCGAGGCGGTGA TAGAATCTTCATGGACATGCACCCCTATTTTGCCTTCAACGGAGGACAGACTAGGGTGGACCCGATTGCTAATGG AACGGGTTCTGGGGCAGGTGGCGTCTGGCCTGGTATAGCGTGCCAGCGATGGAATGCGTTGTTCTCTAACAGGTA TGTCCAGTTGTCATTGCGCCTGCTTTCCTTTTGGCCTCATCACTTGCGAACACAGCCGTTCGGAATTCGGAGTCA CCGTAGCGGGCGAATGGAGTAACGGCTTTAACGACTGTGGTCTTTTTTTAAACGGGGTTGGCCTACCAGCCACCT ACGCTGGAAATTGCAATCTCTGGCAGGACTCCACGAACTGGGATGAGGCGACGAAGGCAGGCCTTCGCAAGTTCG CAACTGCAAGTATGGATGCCCTGGATTCATGGTTCTTTTGGACATGGAAGGTAAAAACTGCGGCGATTTTCGTTG TTCTTGCAACTTATTCAATCCTCTTAAGATCGGAAACTCAACCAGGGGTATCGTTGAGGCACCGTTGTGGTCATA CCAACTGGGACTCGAAGGAGGTTGGATTCCGCGAGACCCTCGCACCGCCTACGGGACGTGCAGCAAGCTCGGTTC TCCTTTGACGCCGGTCAAAGGTCCCTATCCCTCTTGGATGACCGGTGGTGATGGCGCAGGACCTCCTCGAGATGC AAGAAGCTACCCCTGGCCGCCCTCCATGATCGCCGGGGGAGGAGCGCCAACAATTGTTCCGCACTATGCAGCTAC TGGCATTATTGCGACCCTACCGCCACCGACATACACCGCAAGTGACGGACATACAATTTCGTCTGGAAATGGCTG GTTCAATACGCAAGACACGGCTCCCGCACCGACCCCGATCCAGGGTTGCGTCTACCCCGACGCTTGGAACCCCAA ACCGACCGCAGTATCTTCCCAATGTTTGGCGTAGCTTTCTCGTGTATCAGGTTTGTCCGGTGCACACCTCCGATG CACTATGGCGAACATGTTTCCTGATGGGTACACCCACAATCGATGTCACTGCCGTCATACACGCGTTTTGGTGAA CAGAGCCTGGTAGTCACAGCCCTTTCTCTTTCTCGTACTGATCCGGTATTTATAGCCCTCAATTCAGCTCATTCT GTTTCAAACGCAGACCTTCCCCCTTCAGGGGTAATTTACACGTTATGCTTGCGTTC |
Length | 3131 |