CopciAB_379951
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_379951 Strain Coprinopsis cinerea Okayama 7
Standard name - Synonyms 379951
Uniprot id Functional description Kinase-like
Location scaffold_11:1120504..1124636 Strand -
Gene length (nt) 4133 Transcript length (nt) 3991
CDS length (nt) 3657 Protein length (aa) 1218

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Hypsizygus marmoreus strain 51987-8 Hypma_RDB26610 61.7 0 1446
Pleurotus ostreatus PC15 PleosPC15_2_1094786 58.3 0 1289
Schizophyllum commune H4-8 Schco3_2592061 55.3 0 1274
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_188104 56.3 0 1258
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_121991 56.9 0 1223
Lentinula edodes W1-26 v1.0 Lentinedodes1_1958 53.8 0 1206
Pleurotus ostreatus PC9 PleosPC9_1_88888 54.4 0 1201
Lentinula edodes NBRC 111202 Lenedo1_1075203 53.2 0 1195
Ganoderma sp. 10597 SS1 v1.0 Gansp1_136627 51.6 0 1144
Flammulina velutipes Flave_chr01AA00392 54.1 0 1110
Agrocybe aegerita Agrae_CAA7270759 54 0 1037
Grifola frondosa Grifr_OBZ78190 57.2 2.586E-201 661
Auricularia subglabra Aurde3_1_1194132 79.9 1.182E-146 499

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 134.3951 35.1457 20.2914
oidia 91.0203 1.6741 0.9665
vegetative_mycelium 86.6706 14.6561 8.4617
primordia 90.2997 4.7398 2.7365
hyphal_knot 87.3358 1.9272 1.1126
young_fruiting_body 98.4434 14.1407 8.1642
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 95.1018 6.0492 3.4925
Wheat bran 31.8108 6.3531 3.668
Horse manure 58.9111 18.7647 10.8338
Oak leaves 61.7385 21.6275 12.4866
Hay 50.6486 10.3666 5.9852
Corn stalk 62.3609 7.5202 4.3418
Pectine 79.7264 8.3308 4.8098
Microcrystalline cellulose 57.7918 10.8364 6.2564
Xylose 72.3595 6.786 3.9179
Cellobiose 73.1414 14.9504 8.6316
Lignin 71.4244 17.5862 10.1534
Apple peels 113.7266 4.1961 2.4226
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 68.6678 3.8487 2.222
Bsubtilis 69.9639 4.3989 2.5397
Ecoli 53.1362 3.2809 1.8942
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 50.0983 5.597 3.2314
BS 4h 27.8117 5.7584 3.3246
BS 8h 20.5842 2.8372 1.6381
BS 12h 19.3847 1.9633 1.1335
Oidia 0 h 24.47 1.1374 0.6567
Oidia 18 h 35.2381 7.3553 4.2466
Sclerotia 17.857 1.7735 1.0239
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 19.9292 1.4905 0.8605
DM 36h 22.1911 2.1833 1.2605
DM 60h 23.6664 1.6007 0.9241
DM 84h 18.9434 1.492 0.8614
DM 108h 20.722 1.6743 0.9667
DM 132h 23.0558 3.5863 2.0706
DM 156hAE 25.286 3.6428 2.1032
ELI1hAE 22.148 4.2629 2.4612
ELI2hAE 22.4248 3.4121 1.97
LI2hAE 22.7302 3.5292 2.0376
LI6hAE 22.1775 0.4676 0.27
LI12hAE 18.412 2.1296 1.2295
LI18hAE 21.1642 1.6445 0.9495
LI 24hAE 23.0918 4.6637 2.6926
DM 156hAM 23.7436 0.458 0.2644
ELI1hAM 26.462 1.9907 1.1493
ELI2hAM 22.8404 4.2401 2.448
LI2hAM 24.527 0.6491 0.3748
LI6hAM 24.6942 3.2442 1.8731
LI12hAM 18.8812 2.8296 1.6337
LI18hAM 23.3466 0.9804 0.566
LI 24hAM 27.798 3.0357 1.7526
LI 24hHK 24.3172 3.7453 2.1624
L/D 6h 25.3102 3.244 1.873
L/D 12h 23.5896 1.197 0.6911
L/D 18h 34.53 1.7685 1.021
L/D 24h 34.5823 5.5728 3.2175
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 38.7675 3.3067 1.9091
Hyphal knots 34.5837 10.9315 6.3113
Primordium 1 54.4433 5.46 3.1523
Primordium 2 40.6231 11.6263 6.7124
Young Fruiting body cap 57.6762 4.1593 2.4013
Younf fruiting body gill 85.3144 3.9245 2.2658
Young fruiting body stipe 92.0136 11.6119 6.7041
Mature fruiting body cap_gill 114.4579 8.8916 5.1335
Mature fruiting body stipe 36.6088 2.3337 1.3474
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 44.9783 3.5018 2.0218
NH4NO3 84.1374 16.0271 9.2532
Proline 73.7094 10.8443 6.2609
Tryptophan 67.8871 20.5305 11.8533
Isoleucin 84.9219 14.5829 8.4195
Arginine 60.8557 2.1177 1.2226
Metionine 50.983 5.2285 3.0187
NaNO3 61.7002 1.397 0.8066
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 44.9783 3.5018 2.0218
Citrus peel 29.5473 5.4548 3.1494
Poplar leaves 43.1126 8.2349 4.7544
Typha leaves 42.1713 5.5252 3.19
Overwintered Salix leaves 41.4621 3.9686 2.2913
Reed flowering 39.8147 5.479 3.1633
Tigernut 30.6218 3.5047 2.0234
Energy cane 41.177 2.3066 1.3317
Guar gum 42.5087 13.1835 7.6115
Apple peels 39.5372 6.0298 3.4813
Cellobiose 52.0798 4.5978 2.6545
Corn stalk 40.2547 2.3006 1.3283
Horse manure 37.7527 11.0786 6.3962
Lignin 25.7823 12.1589 7.0199
Microcrystalline cellulose 42.6841 2.4541 1.4169
Oak leaves 33.6274 10.6296 6.137
Pectin esterified 25.0114 4.229 2.4416
Poplar sawdust 46.4584 10.6243 6.134
Wheat bran 20.3378 6.6628 3.8468
Chlamydomonas reinhardtii 37.9204 4.8801 2.8175
Vertatryl alcohol 52.417 6.3367 3.6585
Furfural 40.6522 3.5643 2.0578
Autoclaved mycelium 45.7718 6.1353 3.5422
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 46.8685 5.6908 3.2856
Ribose 48.0136 2.2033 1.2721
Mannose 54.8888 3.8032 2.6892
Fructose 53.3261 3.6912 2.1311
Arabinose 54.3212 2.3527 1.3584
Xylose 53.1932 5.4514 3.1474
Galacturonic acid 48.7205 2.7615 1.5943
Rhamnogalacturonan 45.1532 1.7876 1.0321
Pectin esterified 44.1607 2.0811 1.2015
Polygalacturonic acid 49.5633 6.351 3.6668
Sodium acetate 54.422 2.6597 1.5356
No nitrogen 61.6977 6.3242 3.6513
BSA 55.6149 0.4957 0.2862
Glutamine 59.9003 3.4172 1.9729
No phosphate 55.2819 5.3299 3.0772
No carbon 52.9126 0.1942 0.1373
No sulphur 64.7301 3.4895 2.0147
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 44.9783 3.5018 2.0218
Amylose 43.2298 6.3852 3.6865
Fucose 45.5019 6.5014 3.7536
Galactose 45.5002 2.2107 1.2763
Lactose 68.0968 11.7338 6.7745
Maltose 62.8098 12.9418 7.4719
Mannitol 75.0935 11.915 6.8791
Rhamnose 60.2484 2.7754 1.6024
Sorbitol 49.6365 4.284 2.4734
Trehalose 50.953 14.2777 8.2432
Glycerol 50.8471 12.5087 7.2219
Glucuronic acid 50.6409 3.3217 1.9178
Arabinan 42.9203 11.0275 6.3667
Galactan 45.0341 5.0029 2.8884
Galactomannan 31.8814 1.6749 0.967
Glucan 46.5005 5.2323 3.0209
Xylan 37.8507 1.1168 0.6448
Xyloglucan 43.9927 5.7397 3.3138
Arabinogalactan 47.4297 2.7608 1.594
Pectin 20.7881 9.507 5.4889
Rhamnogalacturonan 21.454 3.5257 2.0356
Polygalacturonic acid 44.6778 6.2932 3.6334
Mannan 45.0593 4.6088 2.6609
Amylopectin 45.9363 1.3718 0.792
Inulin 59.559 11.0251 6.3654
BSA 43.5705 5.7089 3.2961
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 23.6664 1.6007 0.9241
2h WAT 20.5564 2.718 1.5693
4h WAT 22.6413 3.4988 2.02
8h WAT 24.7225 2.3169 1.3377
16h WAT 25.5924 4.86 2.8059
24h WAT 24.0436 1.5375 0.8877
WAT hyphal knot -30h 25.5806 4.3822 2.5301
WAT hyphal knot -22h 23.14 2.2961 1.3256
WAT hyphal knot -15h 26.6417 3.3304 1.9228
WAT hyphal knot -7.5h 21.6609 4.912 2.836
WAT hyphal knot 23.7851 5.8379 3.3705
WAT hyphal knot +7.5h 20.7107 1.3307 0.7683
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 41.3995 15.7346 9.0844
Straw 3h 22.6114 4.3761 2.5265
Straw 6h 24.1498 3.9073 2.2559
Straw 12h 33.8385 3.9773 2.2963
Straw 24h 37.7965 7.7155 4.4546
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 20.5933 2.0107 1.1609
Frost (-20C, 30min) 21.9608 1.659 0.9578
Heat shock (47C, 2h) 46.7318 3.2911 1.9001
High CO2 24.0257 3.2979 1.9041
Drought (4% agar, 12h) 18.6834 0.3075 0.1775
Oxidative (1mM H2O2, 3h) 15.4047 0.8077 0.4663
Acidic (pH4, 3h) 15.6395 2.5 1.4434
Alkaline (pH9, 3h) 14.3542 3.0575 1.7652
Osmotic (sorbitol 2h) 15.9066 3.4924 2.0163
CongoRed (3h) 12.7445 3.0801 1.7783
Cobalt chloride control 23.3896 1.1821 0.6825
Cobalt chloride 2mM 18.7718 3.2207 1.8595
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 19.2817 6.438 3.717
Cold stimulation 14.0948 5.0489 2.915
Scratched surface 27.0549 2.3628 1.3641
Ca2+, 200mM, 24h 15.9974 3.0284 1.7484
Cu2+, 2mM, 6h 20.1656 2.4711 1.4267
Voriconazole 20.3997 4.3333 2.5018
Trichoderma interaction, early 20.2416 3.6265 2.0937
Trichoderma interaction 60h 23.1646 20.8086 12.0139
Cobalt chloride 2mM repeat 27.4176 5.9635 3.443
Hypoxia 27.3607 5.6262 3.2483
Hypoxia control 20.18 3.289 1.8989
Protoplastation control 17.5981 1.528 1.0805
Protoplastation 3.5h 20.7332 8.2109 5.806
Protoplastation 1.5h 15.3319 4.681 3.3099

General data

Systematic name -
Protein id CopciAB_379951.T0
Description Kinase-like

Annotation summary

0 300 600 900 1200 1218

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd14003 STKc_AMPK-like - 42 288
Pfam PF00069 Protein kinase domain IPR000719 43 289

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR000719 Protein kinase domain
IPR017441 Protein kinase, ATP binding site
IPR011009 Protein kinase-like domain superfamily
IPR008271 Serine/threonine-protein kinase, active site

GO

Go id Term Ontology
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP

KEGG

KEGG Orthology
No records

EggNOG

COG category Description
T Kinase-like

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_379951 across fungi.

Arrow shows the origin of gene family containing CopciAB_379951.

Protein

Sequence id CopciAB_379951.T0
Sequence >CopciAB_379951.T0
MPSYHGHRYSESVNQNRKAQLANAYNELGKELASSKIRVVGNYTLGKVIGEGAYGKVRLGTHRLTSTRVAIKQIP
KAMSATLTREIHHHRQLHHPHITQMYEVIATESHIWIVTELCCGGELFDYLVEKGRLSEEETKIIFGQLCLAVAY
LHETGIVHRDLKLENVLLDERCRVKLGDFGFTREYERGSLMETFCGTTGYAAPEMLQGKKYQGPEVDVWSLGVIL
YCLLTGTLPFDDDNEDVMRQMIIKGEFEDPAWLSLESRDLIKNILVKDPMKRFTIPQILAHPWFTTKDLTYEPES
PLSVDTSLLTIPQPDEENPDELTIDTNFINGASTSPPRTPDNDPDGDPFNSTPNSITHRASSSTLRREDDAVESK
SLKLRPISWSNSSGSKIPPPSKIRTPARTKRRSVSSVLSLSVDNAKSGEGDAEPTPLTPLPPPTSHSLDFASLLT
TPTPIIFSTPLERELLNSLSALGMDTAQIVHSVLSDACDSAGAIWWMLKKKAEKRALEEPTDVVSPTTATEPHGR
TNGAESELKSSRKVRKVQAGVQTESLVPSPTYLSKPAPQLAFVPPTPTFAKPSTPPRAVSPTRSPMLSPSSSTTH
ELPRSHPSTPGSSMKESKGRKNRSGSVSIMQRATTALEAAGLVRKKSTEGVREQREKSKDKDNDNEKRNTSGEES
RSSHSHDPRGSKLTKSPPLKAQRDYNVPATPPPSETHDSTQIGSPWVLADAKNGAGPSHAPLRGEMPHSHSAPNL
DTATIKAPTQHRNKANILTSLRLWFNEDRKGKRKDSTDSNPRVPSTPQQTYTRTAGGGGTAKRRGSNASAKVMRN
STGHRAKRPSMSSRRSSSVNSRRSSITSMQIPVLDSPQQLSNIRAMGSHTPNSERGDHSSRPSSIHSISSRQKPR
HRKSPSASSSGSLHLRTASPMQKYHRRAGSGSSTRVIRQSLARPPHARSNSATSSLYSPPSSRPTSFYEQSETET
GNVIGNTSSSSSAPRNSSPYRSRKYSDSDSIGGSRPPTSFLASKRSNPFSSPALGGGTLSKSSWKKSWGIEPPGW
QNRTTHLPVEVLVISSSNEPATLRDVFSGRHSFSTTTGAGDDSDWVDEDDDIPAFAGGLGQMGASISSSSSSSAP
INPEPIVTLSPAPRHRNTKRNGGGKQSMVSSVGGRGRAGHSPAERLSPLPSSDSSSVTGESTARGGRRQLPGGRA
GPAFKHAIQEEDEDEEED
Length 1218

Coding

Sequence id CopciAB_379951.T0
Sequence >CopciAB_379951.T0
ATGCCATCGTATCACGGTCACAGATACTCAGAATCCGTCAACCAAAACCGAAAAGCGCAACTAGCCAATGCCTAC
AATGAGCTGGGGAAGGAGTTGGCTTCGTCAAAGATTCGAGTTGTAGGAAACTATACTCTGGGCAAAGTTATAGGG
GAAGGCGCTTATGGCAAGGTTCGCTTGGGGACACACCGTCTCACTTCCACCCGAGTGGCAATCAAGCAAATCCCG
AAAGCAATGTCAGCGACATTGACAAGGGAAATCCACCACCACCGGCAACTGCATCACCCCCATATCACCCAGATG
TACGAAGTTATTGCCACAGAGTCCCACATTTGGATAGTCACAGAGCTCTGCTGTGGTGGAGAGCTGTTTGACTAC
CTCGTCGAGAAGGGCCGTCTTTCGGAGGAGGAAACCAAGATCATTTTCGGTCAACTGTGCCTGGCAGTTGCCTAC
CTTCACGAAACGGGAATTGTCCACCGCGATCTCAAGCTGGAGAACGTCCTGCTGGACGAACGATGTCGGGTTAAA
CTGGGCGACTTTGGTTTCACCCGAGAGTACGAAAGAGGCTCACTCATGGAGACTTTCTGCGGTACGACGGGGTAT
GCAGCTCCTGAGATGTTGCAGGGAAAGAAGTATCAAGGGCCAGAGGTTGACGTTTGGTCACTCGGCGTAATTCTA
TACTGTCTCTTGACGGGGACACTACCTTTCGACGATGATAACGAAGATGTAATGAGACAAATGATTATTAAAGGG
GAATTCGAGGATCCAGCGTGGCTATCATTAGAATCCCGGGACCTCATCAAGAACATCCTGGTAAAGGACCCAATG
AAGCGCTTTACAATCCCACAAATCCTCGCCCACCCGTGGTTCACCACCAAAGACCTCACATACGAACCCGAATCT
CCCCTCTCAGTTGACACCAGCCTCCTAACCATCCCACAACCTGACGAAGAAAACCCTGACGAACTCACGATCGAC
ACGAACTTTATCAACGGTGCATCTACATCACCTCCACGTACACCCGACAACGACCCAGACGGGGACCCATTTAAC
AGCACCCCCAATTCTATCACTCATAGAGCAAGTAGCTCAACCCTTCGAAGAGAAGACGATGCAGTCGAGTCCAAA
TCTCTCAAACTCCGACCCATCTCATGGTCCAACTCCTCTGGGTCCAAGATTCCCCCACCATCCAAGATTCGTACG
CCTGCGCGTACCAAACGACGCTCGGTGTCGTCTGTGCTCTCCCTCTCCGTCGACAACGCCAAATCGGGCGAAGGT
GACGCAGAACCAACCCCCCTCACCCCACTCCCACCACCGACTTCGCACAGCCTAGACTTTGCTTCCTTGCTTACC
ACACCAACACCAATCATCTTCTCCACTCCCCTCGAACGAGAGCTACTCAACTCTCTTAGCGCCCTGGGAATGGAC
ACTGCCCAGATCGTCCATTCCGTCCTCTCTGACGCATGCGATTCGGCTGGTGCAATCTGGTGGATGCTCAAGAAG
AAGGCAGAGAAGCGAGCCCTGGAGGAACCCACCGACGTTGTGTCGCCCACAACAGCCACAGAGCCTCATGGTCGG
ACTAACGGCGCGGAATCCGAGCTCAAATCGTCAAGGAAGGTGCGCAAAGTGCAAGCTGGAGTACAAACCGAATCG
TTGGTGCCTTCCCCGACGTACCTCTCCAAACCAGCCCCGCAGCTGGCTTTCGTTCCCCCAACGCCAACATTCGCG
AAACCGAGCACCCCTCCTAGGGCTGTATCACCCACGCGCTCACCGATGCTTTCTCCTTCGTCATCGACAACCCAT
GAGCTCCCCCGATCGCATCCTTCAACACCAGGAAGCAGCATGAAAGAAAGCAAAGGTAGAAAGAACCGATCCGGT
AGTGTCAGCATCATGCAGCGTGCGACAACCGCACTGGAAGCTGCCGGACTTGTGCGAAAGAAGTCGACCGAAGGT
GTACGCGAGCAGCGGGAAAAATCCAAGGACAAGGACAACGATAACGAGAAGCGCAACACGAGTGGGGAAGAGTCT
CGCTCATCCCATTCTCATGACCCACGAGGATCGAAGCTTACCAAGTCGCCTCCATTGAAGGCTCAGAGGGATTAC
AACGTCCCTGCCACACCACCCCCAAGTGAAACCCATGATTCGACTCAGATCGGGTCTCCCTGGGTTCTGGCAGAT
GCGAAGAATGGTGCAGGGCCATCACATGCCCCTTTGCGTGGGGAGATGCCCCATTCACACAGTGCACCCAATCTC
GACACGGCAACGATCAAGGCGCCTACCCAACATCGAAACAAGGCGAACATCCTGACTTCGTTGCGTCTCTGGTTC
AACGAGGACAGGAAGGGCAAGCGTAAAGATTCCACTGATAGTAATCCCCGCGTGCCATCTACACCGCAGCAAACC
TATACGCGGACAGCAGGAGGTGGAGGAACGGCCAAGCGTCGAGGTAGCAATGCGAGCGCTAAGGTCATGCGTAAC
AGCACCGGACACCGCGCTAAACGTCCCTCGATGTCGTCTCGTCGGTCCAGCAGCGTCAACTCGCGACGATCCTCC
ATCACCTCAATGCAAATCCCAGTCCTCGACTCTCCTCAGCAACTCAGCAACATCCGTGCCATGGGCAGCCACACC
CCCAACTCTGAGCGAGGTGATCACTCTTCCCGGCCTTCATCCATCCACAGCATTTCCTCCCGCCAAAAGCCGCGC
CACCGCAAATCTCCCTCCGCCAGTTCCTCAGGCTCTCTCCATCTCCGAACTGCTTCTCCAATGCAGAAGTATCAC
CGCCGCGCAGGTTCAGGCTCATCTACGCGCGTCATCCGCCAAAGCCTCGCACGTCCCCCACACGCACGGTCCAAT
TCCGCCACCTCCTCGCTCTATTCACCTCCTTCATCTCGACCCACCTCATTCTACGAACAGTCAGAAACCGAAACC
GGCAACGTCATCGGAAATACATCGTCATCCTCCTCCGCACCTCGCAACTCCTCACCCTATCGCAGCCGGAAGTAT
TCCGATTCAGATAGTATCGGCGGCTCACGCCCACCCACGTCCTTCCTCGCTTCCAAACGCTCCAACCCCTTCTCG
AGCCCAGCCCTAGGCGGGGGTACCCTCTCCAAATCCAGCTGGAAGAAATCCTGGGGGATCGAGCCACCGGGATGG
CAAAACCGGACAACACACCTCCCGGTCGAAGTCCTCGTCATCTCCTCTTCCAACGAACCCGCGACACTTCGTGAC
GTCTTTAGCGGGCGTCATTCGTTCAGTACCACTACCGGCGCGGGTGATGACAGCGATTGGGTCGATGAGGATGAC
GATATCCCGGCGTTTGCTGGTGGGCTGGGTCAGATGGGTGCTTCGATTTCTTCGTCCTCGTCTTCGAGTGCGCCC
ATCAACCCTGAGCCTATTGTGACATTGTCACCAGCGCCGAGGCACAGGAACACCAAGAGGAACGGTGGTGGGAAG
CAATCGATGGTCAGTTCCGTGGGTGGGCGCGGGAGGGCTGGGCATTCCCCCGCGGAGAGGTTATCTCCTCTGCCA
AGCTCGGACTCGTCCAGCGTCACTGGAGAAAGTACTGCTCGAGGAGGAAGACGACAACTTCCTGGTGGGCGAGCC
GGACCGGCATTCAAACATGCGATCCAGGAAGAGGATGAAGACGAAGAAGAGGATTAA
Length 3657

Transcript

Sequence id CopciAB_379951.T0
Sequence >CopciAB_379951.T0
ACGCTGCACATGTGGTTATGCCATCGTATCACGGTCACAGATACTCAGAATCCGTCAACCAAAACCGAAAAGCGC
AACTAGCCAATGCCTACAATGAGCTGGGGAAGGAGTTGGCTTCGTCAAAGATTCGAGTTGTAGGAAACTATACTC
TGGGCAAAGTTATAGGGGAAGGCGCTTATGGCAAGGTTCGCTTGGGGACACACCGTCTCACTTCCACCCGAGTGG
CAATCAAGCAAATCCCGAAAGCAATGTCAGCGACATTGACAAGGGAAATCCACCACCACCGGCAACTGCATCACC
CCCATATCACCCAGATGTACGAAGTTATTGCCACAGAGTCCCACATTTGGATAGTCACAGAGCTCTGCTGTGGTG
GAGAGCTGTTTGACTACCTCGTCGAGAAGGGCCGTCTTTCGGAGGAGGAAACCAAGATCATTTTCGGTCAACTGT
GCCTGGCAGTTGCCTACCTTCACGAAACGGGAATTGTCCACCGCGATCTCAAGCTGGAGAACGTCCTGCTGGACG
AACGATGTCGGGTTAAACTGGGCGACTTTGGTTTCACCCGAGAGTACGAAAGAGGCTCACTCATGGAGACTTTCT
GCGGTACGACGGGGTATGCAGCTCCTGAGATGTTGCAGGGAAAGAAGTATCAAGGGCCAGAGGTTGACGTTTGGT
CACTCGGCGTAATTCTATACTGTCTCTTGACGGGGACACTACCTTTCGACGATGATAACGAAGATGTAATGAGAC
AAATGATTATTAAAGGGGAATTCGAGGATCCAGCGTGGCTATCATTAGAATCCCGGGACCTCATCAAGAACATCC
TGGTAAAGGACCCAATGAAGCGCTTTACAATCCCACAAATCCTCGCCCACCCGTGGTTCACCACCAAAGACCTCA
CATACGAACCCGAATCTCCCCTCTCAGTTGACACCAGCCTCCTAACCATCCCACAACCTGACGAAGAAAACCCTG
ACGAACTCACGATCGACACGAACTTTATCAACGGTGCATCTACATCACCTCCACGTACACCCGACAACGACCCAG
ACGGGGACCCATTTAACAGCACCCCCAATTCTATCACTCATAGAGCAAGTAGCTCAACCCTTCGAAGAGAAGACG
ATGCAGTCGAGTCCAAATCTCTCAAACTCCGACCCATCTCATGGTCCAACTCCTCTGGGTCCAAGATTCCCCCAC
CATCCAAGATTCGTACGCCTGCGCGTACCAAACGACGCTCGGTGTCGTCTGTGCTCTCCCTCTCCGTCGACAACG
CCAAATCGGGCGAAGGTGACGCAGAACCAACCCCCCTCACCCCACTCCCACCACCGACTTCGCACAGCCTAGACT
TTGCTTCCTTGCTTACCACACCAACACCAATCATCTTCTCCACTCCCCTCGAACGAGAGCTACTCAACTCTCTTA
GCGCCCTGGGAATGGACACTGCCCAGATCGTCCATTCCGTCCTCTCTGACGCATGCGATTCGGCTGGTGCAATCT
GGTGGATGCTCAAGAAGAAGGCAGAGAAGCGAGCCCTGGAGGAACCCACCGACGTTGTGTCGCCCACAACAGCCA
CAGAGCCTCATGGTCGGACTAACGGCGCGGAATCCGAGCTCAAATCGTCAAGGAAGGTGCGCAAAGTGCAAGCTG
GAGTACAAACCGAATCGTTGGTGCCTTCCCCGACGTACCTCTCCAAACCAGCCCCGCAGCTGGCTTTCGTTCCCC
CAACGCCAACATTCGCGAAACCGAGCACCCCTCCTAGGGCTGTATCACCCACGCGCTCACCGATGCTTTCTCCTT
CGTCATCGACAACCCATGAGCTCCCCCGATCGCATCCTTCAACACCAGGAAGCAGCATGAAAGAAAGCAAAGGTA
GAAAGAACCGATCCGGTAGTGTCAGCATCATGCAGCGTGCGACAACCGCACTGGAAGCTGCCGGACTTGTGCGAA
AGAAGTCGACCGAAGGTGTACGCGAGCAGCGGGAAAAATCCAAGGACAAGGACAACGATAACGAGAAGCGCAACA
CGAGTGGGGAAGAGTCTCGCTCATCCCATTCTCATGACCCACGAGGATCGAAGCTTACCAAGTCGCCTCCATTGA
AGGCTCAGAGGGATTACAACGTCCCTGCCACACCACCCCCAAGTGAAACCCATGATTCGACTCAGATCGGGTCTC
CCTGGGTTCTGGCAGATGCGAAGAATGGTGCAGGGCCATCACATGCCCCTTTGCGTGGGGAGATGCCCCATTCAC
ACAGTGCACCCAATCTCGACACGGCAACGATCAAGGCGCCTACCCAACATCGAAACAAGGCGAACATCCTGACTT
CGTTGCGTCTCTGGTTCAACGAGGACAGGAAGGGCAAGCGTAAAGATTCCACTGATAGTAATCCCCGCGTGCCAT
CTACACCGCAGCAAACCTATACGCGGACAGCAGGAGGTGGAGGAACGGCCAAGCGTCGAGGTAGCAATGCGAGCG
CTAAGGTCATGCGTAACAGCACCGGACACCGCGCTAAACGTCCCTCGATGTCGTCTCGTCGGTCCAGCAGCGTCA
ACTCGCGACGATCCTCCATCACCTCAATGCAAATCCCAGTCCTCGACTCTCCTCAGCAACTCAGCAACATCCGTG
CCATGGGCAGCCACACCCCCAACTCTGAGCGAGGTGATCACTCTTCCCGGCCTTCATCCATCCACAGCATTTCCT
CCCGCCAAAAGCCGCGCCACCGCAAATCTCCCTCCGCCAGTTCCTCAGGCTCTCTCCATCTCCGAACTGCTTCTC
CAATGCAGAAGTATCACCGCCGCGCAGGTTCAGGCTCATCTACGCGCGTCATCCGCCAAAGCCTCGCACGTCCCC
CACACGCACGGTCCAATTCCGCCACCTCCTCGCTCTATTCACCTCCTTCATCTCGACCCACCTCATTCTACGAAC
AGTCAGAAACCGAAACCGGCAACGTCATCGGAAATACATCGTCATCCTCCTCCGCACCTCGCAACTCCTCACCCT
ATCGCAGCCGGAAGTATTCCGATTCAGATAGTATCGGCGGCTCACGCCCACCCACGTCCTTCCTCGCTTCCAAAC
GCTCCAACCCCTTCTCGAGCCCAGCCCTAGGCGGGGGTACCCTCTCCAAATCCAGCTGGAAGAAATCCTGGGGGA
TCGAGCCACCGGGATGGCAAAACCGGACAACACACCTCCCGGTCGAAGTCCTCGTCATCTCCTCTTCCAACGAAC
CCGCGACACTTCGTGACGTCTTTAGCGGGCGTCATTCGTTCAGTACCACTACCGGCGCGGGTGATGACAGCGATT
GGGTCGATGAGGATGACGATATCCCGGCGTTTGCTGGTGGGCTGGGTCAGATGGGTGCTTCGATTTCTTCGTCCT
CGTCTTCGAGTGCGCCCATCAACCCTGAGCCTATTGTGACATTGTCACCAGCGCCGAGGCACAGGAACACCAAGA
GGAACGGTGGTGGGAAGCAATCGATGGTCAGTTCCGTGGGTGGGCGCGGGAGGGCTGGGCATTCCCCCGCGGAGA
GGTTATCTCCTCTGCCAAGCTCGGACTCGTCCAGCGTCACTGGAGAAAGTACTGCTCGAGGAGGAAGACGACAAC
TTCCTGGTGGGCGAGCCGGACCGGCATTCAAACATGCGATCCAGGAAGAGGATGAAGACGAAGAAGAGGATTAAG
AATCTGACTTCTTTTCCCCTCATTTATCCATTCATTATATGGCCAATTGCCTACTTTTTTTCTTCAAAACCGATC
CCTTGAAGGGAACACTGCTCATCTAACTACGCTGGTTTTTTGAATCGATTTACGGGATAATTCTACTTGACTGCA
CAGATGCATAGTCTCTGTTCTTTTTCTTTCTTTCTTTGGGCTTCGTAAAGGAAAAATAAACGAACACTTACATAC
ACCCCGCTCCTTACAACAAATGTAATACGTACCTCTGCTATCTAGTTCTATACCCGATACCCCTTTGAATACGAC
GAAGTTCTGACAAGAG
Length 3991

Gene

Sequence id CopciAB_379951.T0
Sequence >CopciAB_379951.T0
ACGCTGCACATGTGGTTATGCCATCGTATCACGGTCACAGATACTCAGAATCCGTCAACCAAAACCGAAAAGCGC
AACTAGCCAATGCCTACAATGAGCTGGGGAAGGAGTTGGCTTCGTCAAAGATTCGAGTTGTAGGAAACTATACTC
TGGGCAAAGTTATAGGGGAAGGTGCGTTGTCGACCTGACCCAGCCGAGTTCTTCTTTGACAGTCGACAGGCGCTT
ATGGCAAGGTTCGCTTGGGGACACACCGTCTCACTTCCACCCGAGTGGCAATCAAGCAAATCCCGAAAGCAATGT
CAGCGACATTGACAAGGGAAATCCACCACCACCGGCAACTGCATCACCCCCATATCACCCAGATGTACGAAGTTA
TTGCCACAGAGTCCCACATTTGGATAGTCACAGAGCTCTGCTGTGGTGGAGAGCTGTTTGACTACCTCGTCGAGA
AGGGCCGTCTTTCGGAGGAGGAAACCAAGATCATTTTCGGTCAACTGTGCCTGGCAGTTGCCTACCTTCACGAAA
CGGGAATTGTCCACCGCGATCTCAAGCTGGAGAACGTCCTGCTGGACGAACGATGTCGGGTTAAACTGGGCGACT
TTGGTTTCACCCGAGAGTACGAAAGAGGCTCACTCATGGAGACTTTCTGCGGTACGACGGGGTATGCAGCTCCTG
AGATGTTGCAGGGAAAGAAGTATCAAGGGCCAGGTGAGTTACCATCCTGCTAGGGCTCATATTAACCTAATTCTG
CCTCCAGAGGTTGACGTTTGGTCACTCGGCGTAATTCTATACTGTCTCTTGACGGGGACACTACCTTTCGACGAT
GATAACGAAGATGTAATGAGACAAATGATTATTAAAGGGGAATTCGAGGATCCAGCGTGGCTATCATTAGGTATG
TTCCCTCTTATTGCGCTCTGCGCTCTCTGACGCCTTCCAGAATCCCGGGACCTCATCAAGAACATCCTGGTAAAG
GACCCAATGAAGCGCTTTACAATCCCACAAATCCTCGCCCACCCGTGGTTCACCACCAAAGACCTCACATACGAA
CCCGAATCTCCCCTCTCAGTTGACACCAGCCTCCTAACCATCCCACAACCTGACGAAGAAAACCCTGACGAACTC
ACGATCGACACGAACTTTATCAACGGTGCATCTACATCACCTCCACGTACACCCGACAACGACCCAGACGGGGAC
CCATTTAACAGCACCCCCAATTCTATCACTCATAGAGCAAGTAGCTCAACCCTTCGAAGAGAAGACGATGCAGTC
GAGTCCAAATCTCTCAAACTCCGACCCATCTCATGGTCCAACTCCTCTGGGTCCAAGATTCCCCCACCATCCAAG
ATTCGTACGCCTGCGCGTACCAAACGACGCTCGGTGTCGTCTGTGCTCTCCCTCTCCGTCGACAACGCCAAATCG
GGCGAAGGTGACGCAGAACCAACCCCCCTCACCCCACTCCCACCACCGACTTCGCACAGCCTAGACTTTGCTTCC
TTGCTTACCACACCAACACCAATCATCTTCTCCACTCCCCTCGAACGAGAGCTACTCAACTCTCTTAGCGCCCTG
GGAATGGACACTGCCCAGATCGTCCATTCCGTCCTCTCTGACGCATGCGATTCGGCTGGTGCAATCTGGTGGATG
CTCAAGAAGAAGGCAGAGAAGCGAGCCCTGGAGGAACCCACCGACGTTGTGTCGCCCACAACAGCCACAGAGCCT
CATGGTCGGACTAACGGCGCGGAATCCGAGCTCAAATCGTCAAGGAAGGTGCGCAAAGTGCAAGCTGGAGTACAA
ACCGAATCGTTGGTGCCTTCCCCGACGTACCTCTCCAAACCAGCCCCGCAGCTGGCTTTCGTTCCCCCAACGCCA
ACATTCGCGAAACCGAGCACCCCTCCTAGGGCTGTATCACCCACGCGCTCACCGATGCTTTCTCCTTCGTCATCG
ACAACCCATGAGCTCCCCCGATCGCATCCTTCAACACCAGGAAGCAGCATGAAAGAAAGCAAAGGTAGAAAGAAC
CGATCCGGTAGTGTCAGCATCATGCAGCGTGCGACAACCGCACTGGAAGCTGCCGGACTTGTGCGAAAGAAGTCG
ACCGAAGGTGTACGCGAGCAGCGGGAAAAATCCAAGGACAAGGACAACGATAACGAGAAGCGCAACACGAGTGGG
GAAGAGTCTCGCTCATCCCATTCTCATGACCCACGAGGATCGAAGCTTACCAAGTCGCCTCCATTGAAGGCTCAG
AGGGATTACAACGTCCCTGCCACACCACCCCCAAGTGAAACCCATGATTCGACTCAGATCGGGTCTCCCTGGGTT
CTGGCAGATGCGAAGAATGGTGCAGGGCCATCACATGCCCCTTTGCGTGGGGAGATGCCCCATTCACACAGTGCA
CCCAATCTCGACACGGCAACGATCAAGGCGCCTACCCAACATCGAAACAAGGCGAACATCCTGACTTCGTTGCGT
CTCTGGTTCAACGAGGACAGGAAGGGCAAGCGTAAAGATTCCACTGATAGTAATCCCCGCGTGCCATCTACACCG
CAGCAAACCTATACGCGGACAGCAGGAGGTGGAGGAACGGCCAAGCGTCGAGGTAGCAATGCGAGCGCTAAGGTC
ATGCGTAACAGCACCGGACACCGCGCTAAACGTCCCTCGATGTCGTCTCGTCGGTCCAGCAGCGTCAACTCGCGA
CGATCCTCCATCACCTCAATGCAAATCCCAGTCCTCGACTCTCCTCAGCAACTCAGCAACATCCGTGCCATGGGC
AGCCACACCCCCAACTCTGAGCGAGGTGATCACTCTTCCCGGCCTTCATCCATCCACAGCATTTCCTCCCGCCAA
AAGCCGCGCCACCGCAAATCTCCCTCCGCCAGTTCCTCAGGCTCTCTCCATCTCCGAACTGCTTCTCCAATGCAG
AAGTATCACCGCCGCGCAGGTTCAGGCTCATCTACGCGCGTCATCCGCCAAAGCCTCGCACGTCCCCCACACGCA
CGGTCCAATTCCGCCACCTCCTCGCTCTATTCACCTCCTTCATCTCGACCCACCTCATTCTACGAACAGTCAGAA
ACCGAAACCGGCAACGTCATCGGAAATACATCGTCATCCTCCTCCGCACCTCGCAACTCCTCACCCTATCGCAGC
CGGAAGTATTCCGATTCAGATAGTATCGGCGGCTCACGCCCACCCACGTCCTTCCTCGCTTCCAAACGCTCCAAC
CCCTTCTCGAGCCCAGCCCTAGGCGGGGGTACCCTCTCCAAATCCAGCTGGAAGAAATCCTGGGGGATCGAGCCA
CCGGGATGGCAAAACCGGACAACACACCTCCCGGTCGAAGTCCTCGTCATCTCCTCTTCCAACGAACCCGCGACA
CTTCGTGACGTCTTTAGCGGGCGTCATTCGTTCAGTACCACTACCGGCGCGGGTGATGACAGCGATTGGGTCGAT
GAGGATGACGATATCCCGGCGTTTGCTGGTGGGCTGGGTCAGATGGGTGCTTCGATTTCTTCGTCCTCGTCTTCG
AGTGCGCCCATCAACCCTGAGCCTATTGTGACATTGTCACCAGCGCCGAGGCACAGGAACACCAAGAGGAACGGT
GGTGGGAAGCAATCGATGGTCAGTTCCGTGGGTGGGCGCGGGAGGGCTGGGCATTCCCCCGCGGAGAGGTTATCT
CCTCTGCCAAGCTCGGACTCGTCCAGCGTCACTGGAGAAAGTACTGCTCGAGGAGGAAGACGACAACTTCCTGGT
GGGCGAGCCGGACCGGCATTCAAACATGCGATCCAGGAAGAGGATGAAGACGAAGAAGAGGATTAAGAATCTGAC
TTCTTTTCCCCTCATTTATCCATTCATTATATGGCCAATTGCCTACTTTTTTTCTTCAAAACCGATCCCTTGAAG
GGAACACTGCTCATCTAACTACGCTGGTTTTTTGAATCGATTTACGGGATAATTCTACTTGACTGCACAGATGCA
TAGTCTCTGTTCTTTTTCTTTCTTTCTTTGGGCTTCGTAAAGGAAAAATAAACGAACACTTACATACACCCCGCT
CCTTACAACAAATGTAATACGTACCTCTGCTATCTAGTTCTATACCCGATACCCCTTTGAATACGACGAAGTTCT
GACAAGAG
Length 4133