Systematic name | CopciAB_380636 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 380636 |
Uniprot id | Functional description | Alpha-kinase family | |
Location | scaffold_4:3564787..3567227 | Strand | - |
Gene length (nt) | 2441 | Transcript length (nt) | 2016 |
CDS length (nt) | 2016 | Protein length (aa) | 671 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Hypsizygus marmoreus strain 51987-8 | Hypma_RDB24996 | 25.6 | 1.005E-26 | 117 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_380636.T0 |
Description | Alpha-kinase family |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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CDD | cd04515 | Alpha_kinase | - | 389 | 617 |
Pfam | PF02816 | Alpha-kinase family | IPR004166 | 411 | 585 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR004166 | MHCK/EF2 kinase |
IPR011009 | Protein kinase-like domain superfamily |
Go id | Term | Ontology |
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GO:0004674 | protein serine/threonine kinase activity | MF |
GO:0005524 | ATP binding | MF |
GO:0006468 | protein phosphorylation | BP |
KEGG Orthology |
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No records |
COG category | Description |
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G | Alpha-kinase family |
Class | Family | Subfamily |
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No records |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_380636.
Sequence id | CopciAB_380636.T0 |
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Sequence |
>CopciAB_380636.T0 MSQTTCPTCHHRFFRLENPPCPKCRARTPGLSSLLVSQLNEKPQCSGCGVYGDLPTLSNGPLCNLCVAFYKAGGS APLELLQDPRASQQLLAASADGSAATNPQSQQLLERALSYQQSASGTRLGQKPRVTGTGPNPVLFSNLAKAHQYN AAKKASLEREKNKKVAIRISSTLYLSNHKGLRPVPGTREGHTFIQPAATKVVEGYACLLGRTHNRLLKLSPDTER NEPSWEEVTVHLQEGTNKAVSIDHFDKNDSILALFNYLVQENFLKPSQVADRHIEIWFAFDEKSDYISGVSEGLQ SAIPLRQSTAKSAVPPAQSKASARVLHSRPSAQQVVRRSVYMRASARPSEPSPQFSRDPPLVEVTFLRVTASTEN GADISWSQASTLEKTETILVSKNLEANSTNPGFIGKGTSKYAYYGRMATSTGWKEYAVAVLQDQQLSPHNARLLL RAEYVLMCKGQYFKQAFDQLAQDLNVKIPNFCFDFKEAIFGSLIPKPDTQAHLPHHWFLATPLLRCGPFDPPFRK FTGNDEMGPPEDAITAAVHAFAHFSYVYSGGDLVFCDLQGGRDSSGRVCLVDPQCHTLSKAKDSPVYWDGGPSKI KIVIDKHLQDCSQNQYCNALGLKFLQYTADDPFEEPGHQGQDDPASPSRPKKKRRTASPRGVMAINSLLTS |
Length | 671 |
Sequence id | CopciAB_380636.T0 |
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Sequence |
>CopciAB_380636.T0 ATGAGTCAGACCACTTGTCCCACATGCCACCATCGGTTCTTCCGACTTGAAAACCCGCCCTGTCCCAAATGCCGT GCTCGCACTCCTGGTCTCTCCTCCCTCTTGGTTTCCCAGCTTAACGAGAAGCCCCAGTGCTCTGGCTGCGGCGTC TATGGAGATCTTCCCACCTTATCCAACGGGCCTCTGTGCAACCTATGTGTTGCGTTTTATAAGGCGGGCGGTAGC GCTCCGCTGGAGTTACTTCAGGATCCCCGCGCTTCCCAGCAGCTCCTCGCCGCCTCCGCTGATGGCTCTGCCGCC ACAAATCCTCAGTCCCAGCAGCTGCTGGAGCGTGCTCTGTCCTATCAGCAGAGCGCGAGTGGCACAAGGCTCGGG CAAAAGCCAAGGGTCACTGGTACCGGGCCTAATCCTGTGTTGTTCAGTAACCTGGCCAAGGCCCACCAATACAAC GCTGCCAAAAAAGCAAGCCTCGAAAGGGAAAAAAACAAAAAAGTCGCCATCCGCATTTCGAGCACCCTCTACCTC TCAAACCACAAAGGACTCAGGCCTGTTCCCGGCACCAGGGAAGGGCATACTTTTATCCAACCTGCGGCGACGAAG GTTGTCGAGGGATATGCGTGCCTCCTTGGTCGCACTCACAACCGATTGCTGAAGTTGTCCCCAGACACCGAGCGT AATGAGCCCAGTTGGGAGGAGGTAACCGTCCACCTCCAAGAAGGCACGAATAAGGCCGTCTCCATCGATCACTTC GACAAAAACGATAGCATTCTGGCCCTTTTCAACTACCTGGTCCAGGAAAACTTTCTCAAACCTTCCCAAGTCGCA GACCGCCATATTGAGATATGGTTTGCTTTTGATGAGAAATCGGACTACATTTCGGGGGTTTCTGAAGGCCTCCAG TCTGCTATCCCCCTCAGGCAGTCCACAGCCAAAAGTGCGGTACCTCCCGCGCAGTCCAAGGCCAGTGCACGGGTG TTGCATTCACGTCCGTCTGCTCAGCAGGTGGTACGTCGAAGCGTGTACATGAGGGCTAGCGCCCGCCCAAGCGAG CCTTCCCCTCAGTTCTCCAGAGACCCTCCTCTTGTAGAAGTCACTTTCCTTCGTGTCACCGCCTCTACTGAGAAT GGTGCTGACATATCGTGGTCTCAAGCCTCAACACTTGAAAAAACGGAGACCATACTGGTTTCCAAGAACTTGGAA GCTAATAGTACCAACCCCGGCTTCATTGGGAAAGGGACCAGCAAATACGCCTACTACGGACGAATGGCTACTTCT ACTGGCTGGAAGGAATATGCGGTTGCAGTCCTCCAAGACCAGCAGCTTTCCCCCCACAATGCCCGACTCCTCCTT CGAGCCGAGTACGTTCTCATGTGCAAAGGACAGTATTTCAAGCAAGCATTCGACCAGTTGGCACAAGATCTCAAT GTTAAAATCCCCAACTTCTGTTTCGACTTCAAGGAAGCTATTTTTGGGTCCTTGATCCCAAAGCCTGACACCCAG GCCCACCTCCCCCACCACTGGTTTCTCGCAACACCTTTGCTACGCTGTGGCCCCTTCGATCCACCATTCCGCAAG TTCACTGGCAACGACGAGATGGGCCCCCCAGAAGACGCTATAACCGCTGCAGTCCACGCGTTTGCGCACTTCTCA TATGTGTACTCCGGGGGCGACCTCGTCTTTTGTGACCTCCAAGGAGGGCGTGATTCTTCCGGCCGTGTTTGTCTG GTTGACCCCCAATGTCACACGTTATCCAAAGCAAAAGATAGTCCCGTCTATTGGGACGGCGGGCCCAGCAAGATC AAGATTGTTATCGACAAGCACCTCCAGGATTGCAGTCAGAACCAGTACTGCAATGCGCTCGGACTCAAGTTCCTT CAATATACAGCGGACGACCCTTTCGAAGAGCCCGGACACCAGGGTCAGGATGACCCTGCTTCTCCTTCCCGACCC AAGAAGAAACGCCGAACCGCGTCTCCTCGTGGGGTCATGGCAATCAATAGCCTTCTCACCTCCTGA |
Length | 2016 |
Sequence id | CopciAB_380636.T0 |
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Sequence |
>CopciAB_380636.T0 ATGAGTCAGACCACTTGTCCCACATGCCACCATCGGTTCTTCCGACTTGAAAACCCGCCCTGTCCCAAATGCCGT GCTCGCACTCCTGGTCTCTCCTCCCTCTTGGTTTCCCAGCTTAACGAGAAGCCCCAGTGCTCTGGCTGCGGCGTC TATGGAGATCTTCCCACCTTATCCAACGGGCCTCTGTGCAACCTATGTGTTGCGTTTTATAAGGCGGGCGGTAGC GCTCCGCTGGAGTTACTTCAGGATCCCCGCGCTTCCCAGCAGCTCCTCGCCGCCTCCGCTGATGGCTCTGCCGCC ACAAATCCTCAGTCCCAGCAGCTGCTGGAGCGTGCTCTGTCCTATCAGCAGAGCGCGAGTGGCACAAGGCTCGGG CAAAAGCCAAGGGTCACTGGTACCGGGCCTAATCCTGTGTTGTTCAGTAACCTGGCCAAGGCCCACCAATACAAC GCTGCCAAAAAAGCAAGCCTCGAAAGGGAAAAAAACAAAAAAGTCGCCATCCGCATTTCGAGCACCCTCTACCTC TCAAACCACAAAGGACTCAGGCCTGTTCCCGGCACCAGGGAAGGGCATACTTTTATCCAACCTGCGGCGACGAAG GTTGTCGAGGGATATGCGTGCCTCCTTGGTCGCACTCACAACCGATTGCTGAAGTTGTCCCCAGACACCGAGCGT AATGAGCCCAGTTGGGAGGAGGTAACCGTCCACCTCCAAGAAGGCACGAATAAGGCCGTCTCCATCGATCACTTC GACAAAAACGATAGCATTCTGGCCCTTTTCAACTACCTGGTCCAGGAAAACTTTCTCAAACCTTCCCAAGTCGCA GACCGCCATATTGAGATATGGTTTGCTTTTGATGAGAAATCGGACTACATTTCGGGGGTTTCTGAAGGCCTCCAG TCTGCTATCCCCCTCAGGCAGTCCACAGCCAAAAGTGCGGTACCTCCCGCGCAGTCCAAGGCCAGTGCACGGGTG TTGCATTCACGTCCGTCTGCTCAGCAGGTGGTACGTCGAAGCGTGTACATGAGGGCTAGCGCCCGCCCAAGCGAG CCTTCCCCTCAGTTCTCCAGAGACCCTCCTCTTGTAGAAGTCACTTTCCTTCGTGTCACCGCCTCTACTGAGAAT GGTGCTGACATATCGTGGTCTCAAGCCTCAACACTTGAAAAAACGGAGACCATACTGGTTTCCAAGAACTTGGAA GCTAATAGTACCAACCCCGGCTTCATTGGGAAAGGGACCAGCAAATACGCCTACTACGGACGAATGGCTACTTCT ACTGGCTGGAAGGAATATGCGGTTGCAGTCCTCCAAGACCAGCAGCTTTCCCCCCACAATGCCCGACTCCTCCTT CGAGCCGAGTACGTTCTCATGTGCAAAGGACAGTATTTCAAGCAAGCATTCGACCAGTTGGCACAAGATCTCAAT GTTAAAATCCCCAACTTCTGTTTCGACTTCAAGGAAGCTATTTTTGGGTCCTTGATCCCAAAGCCTGACACCCAG GCCCACCTCCCCCACCACTGGTTTCTCGCAACACCTTTGCTACGCTGTGGCCCCTTCGATCCACCATTCCGCAAG TTCACTGGCAACGACGAGATGGGCCCCCCAGAAGACGCTATAACCGCTGCAGTCCACGCGTTTGCGCACTTCTCA TATGTGTACTCCGGGGGCGACCTCGTCTTTTGTGACCTCCAAGGAGGGCGTGATTCTTCCGGCCGTGTTTGTCTG GTTGACCCCCAATGTCACACGTTATCCAAAGCAAAAGATAGTCCCGTCTATTGGGACGGCGGGCCCAGCAAGATC AAGATTGTTATCGACAAGCACCTCCAGGATTGCAGTCAGAACCAGTACTGCAATGCGCTCGGACTCAAGTTCCTT CAATATACAGCGGACGACCCTTTCGAAGAGCCCGGACACCAGGGTCAGGATGACCCTGCTTCTCCTTCCCGACCC AAGAAGAAACGCCGAACCGCGTCTCCTCGTGGGGTCATGGCAATCAATAGCCTTCTCACCTCCTGA |
Length | 2016 |
Sequence id | CopciAB_380636.T0 |
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Sequence |
>CopciAB_380636.T0 ATGAGTCAGACCACTTGTCCCACATGCCACCATCGGTTCTTCCGACTTGAAAACCCGCCCTGTCCCAAATGCCGT GCTCGCACTCCTGGTCTCTCCTCCCTCTTGGTTTCCCAGCTTAACGTTAGTCAATTCCTTGCGCAGCCAGTGCTC GTTGTTTACTCCCGACACCTATAGGAGAAGCCCCAGTGCTCTGGCTGCGGCGTCTATGGAGATCTTCCCACCTTA TCCAACGGGCCTCTGTGCAACCTATGTGTTGCGTTTTATAGTAGGTTAATCAATATCCCTTTTGATTCTTCAACT GACAGACTACCAGAGGCGGGCGGTAGCGCTCCGCTGGAGTTACTTCAGGATCCCCGCGCTTCCCAGCAGCTCCTC GCCGCCTCCGCTGATGGCTCTGCCGCCACAAATCCTCAGTCCCAGCAGCTGCTGGAGCGTGCTCTGTCCTATCAG CAGAGCGCGAGTGGCACAAGGCTCGGGCAAAAGCCAAGGGTCACTGGTACCGGGCCTAATCCTGTGTTGTTCAGT AACCTGGCCAAGGCCCACCAATACAACGCTGCCAAAAAAGCAAGCCTCGAAAGGGAAAAAAACAAAAAAGTCGCC ATCCGCATTTCGAGCACCCTCTACCTCTCAAACCACAAAGGACTCAGGCCTGTGCGTCGCTATCACCTTTGCTTT TCCATCCTCACACGTCACCGTTTGTCCCAGGTTCCCGGCACCAGGGAAGGGCATACTTTTATCCAACCTGCGGCG ACGAAGGTTGTCGAGGGATATGCGTGCCTCCTTGGTCGCACTCACAACCGATTGCTGAAGTTGTCCCCAGACACC GAGCGTAATGAGCCCAGTTGGTGAGCAGACATCTCTATCCCCAAGGTCATATCTTCTGACCAGTTTCACACCAAA GGGAGGAGGTAACCGTCCACCTCCAAGAAGGCACGAATAAGGCCGTCTCCATCGATCACTTCGACAAAAACGATA GCATTCTGGCCCTTTTCAACTACCTGGTCCAGGAAAACTTTCTCAAACCTTCCCAAGTCGCAGACCGCCATATTG AGATATGGTTTGCTTTTGATGAGAAATCGGTTCGTCATTCCCGACGCTTTTGTTTCCTCCTACTCATAATACTTG TGAAATGCAGGACTACATTTCGGGGGTTTCTGAAGGCCTCCAGTCTGCTATCCCCCTCAGGCAGTCCACAGCCAA AAGTGCGGTACCTCCCGCGCAGTCCAAGGCCAGTGCACGGGTGTTGCATTCACGTCCGTCTGCTCAGCAGGTGGT ACGTCGAAGCGTGTACATGAGGGCTAGCGCCCGCCCAAGCGAGCCTTCCCCTCAGTTCTCCAGAGACCCTCCTCT TGTAGAAGTCACTTTCCTTCGTGTCACCGCCTCTACTGAGAATGGTGCTGACATATCGTGGTCTCAAGCCTCAAC ACTTGAAAAAACGGAGACCATACTGGTTTCCAAGAACTTGGAAGCTAATAGTACCAACCCCGGCTTCATTGGGAA AGGGACCAGCAAATACGCCTACTACGTTAGTACCCCATCATGCTGACGTTTCCCAACCATGCTGAGCTCTCTACA GGGACGAATGGCTACTTCTACTGGCTGGAAGGAATATGCGGTTGCAGTCCTCCAAGACCAGCAGCTTTCCCCCCA CAATGCCCGACTCCTCCTTCGAGCCGAGTACGTTCTCATGTGCAAAGGACAGTATTTCAAGCAAGCATTCGACCA GTTGGCACAAGATCTCAATGTTAAAATCCCCAACTTCTGTTTCGACTTCAAGGAAGCTATTTTTGGGTCCTTGAT CCCAAAGCCTGACACCCAGGCCCACCTCCCCCACCACTGGTTTCTCGCAACACCTTTGCTACGCTGTGGCCCCTT CGATCCACCATTCCGCAAGTTCACTGGCAACGACGAGATGGGCCCCCCAGAAGACGCTATAACCGCTGCAGTCCA CGCGTTTGCGCACTTCTCATATGTGTACTCCGGGGGCGACCTCGTCTTTTGTGACCTCCAAGGTTCGGGGTCCTC CCTGTGCTCCTTCCGTGGCCTTATTGACCTAGGGAACTTACAGGAGGGCGTGATTCTTCCGGCCGTGTTTGTCTG GTTGACCCCCAATGTCACACGTGAGTCTCCTTTGTTTCAGCAGTAACCTTCCCCTCTGACGTCCTCCCAGGTTAT CCAAAGCAAAAGATAGTCCCGTCTATTGGGACGGCGGGCCCAGCAAGATCAAGATTGTTATCGACAAGCACCTCC AGGATTGCAGTCAGAACCAGTACTGCAATGCGCTCGGACTCAAGTTCCTTCAATATACAGCGGACGACCCTTTCG AAGAGCCCGGACACCAGGGTCAGGATGACCCTGCTTCTCCTTCCCGACCCAAGAAGAAACGCCGAACCGCGTCTC CTCGTGGGGTCATGGCAATCAATAGCCTTCTCACCTCCTGA |
Length | 2441 |