Systematic name | CopciAB_383673 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 383673 |
Uniprot id | Functional description | Atypical alpha protein kinase | |
Location | scaffold_12:636177..638714 | Strand | + |
Gene length (nt) | 2538 | Transcript length (nt) | 1965 |
CDS length (nt) | 1965 | Protein length (aa) | 654 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Hypsizygus marmoreus strain 51987-8 | Hypma_RDB20021 | 24.3 | 4.661E-23 | 105 |
Pleurotus eryngii ATCC 90797 | Pleery1_1405133 | 39.4 | 1.604E-18 | 90 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_158744 | 33.3 | 2.805E-14 | 76 |
Lentinula edodes NBRC 111202 | Lenedo1_745647 | 38.8 | 6.176E-14 | 75 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_383673.T0 |
Description | Atypical alpha protein kinase |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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CDD | cd04515 | Alpha_kinase | - | 369 | 585 |
Pfam | PF02816 | Alpha-kinase family | IPR004166 | 384 | 585 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR004166 | MHCK/EF2 kinase |
IPR011009 | Protein kinase-like domain superfamily |
Go id | Term | Ontology |
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GO:0004674 | protein serine/threonine kinase activity | MF |
GO:0005524 | ATP binding | MF |
GO:0006468 | protein phosphorylation | BP |
KEGG Orthology |
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No records |
COG category | Description |
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G | Atypical alpha protein kinase |
Class | Family | Subfamily |
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No records |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_383673.
Sequence id | CopciAB_383673.T0 |
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Sequence |
>CopciAB_383673.T0 MARCSGCSQRFDLLVEGTRCGRCTKRAPRPNVEEWGMCNKCGEVFEFMDQNVCFDCSKYTAGNGVQQASREAIAN PVNVRTHTNSGGGTSAQFQGAGNQQLQEEALRIMSSMSHSYTDAHARTSGTRFQGRIAPSKLKLKTAAELGIPRP VKRLNLKIVKLFDFRQGKYLPGAPFHADNTEYPDDTPMATVLEDIRTKVDNAYKKDRDYRVYDINEFTMLWASAR VAVDPSLCTGTLRDLWRACSANSLLVSPADVKKSLIEWAVAVNYDEARNDTDDDDTVPKFKGKTKASLFRISYTN PNRSLDVGAAALQANTSKGASAKRMRTIIPSGRNAYVTRLGVAQSTGIVHIVLKGYWTWVEDSAVWVEEQEPFKV VVDKESFASGVTKKAVKMYIDKKKYAAKYFYDIDGSGAVSHKDNLVHLKDELLRGHILEVAAEKFVKSARHAKIS TYDIRGPAESFILTVVEGPSKGRAWLVDPLFENAVMRKFSGTDLAGANSDLAGRTCDAFAHFSLDDSDGSVVFVD IQGIDSSTLPITSGIPLNVAHSVTLFDVMIHSSDGVYGLGDQGWTGIRDFVTQHKCNTICAKLGLRDVRELWDEY HADEHPALEDKNNKPNADTTYDLDDVDRLEMENDPDADLDQDGVGDDRTTAGDN |
Length | 654 |
Sequence id | CopciAB_383673.T0 |
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Sequence |
>CopciAB_383673.T0 ATGGCTCGCTGCTCTGGCTGCTCCCAACGCTTTGACCTCCTTGTTGAGGGTACTCGCTGTGGTCGTTGCACCAAG CGCGCTCCACGGCCTAACGTTGAGGAGTGGGGGATGTGCAACAAATGCGGGGAGGTCTTTGAGTTCATGGACCAA AATGTATGTTTTGATTGCTCGAAGTATACCGCAGGTAATGGGGTACAACAGGCGAGTCGCGAAGCTATTGCGAAT CCGGTCAACGTCAGAACACATACAAATTCTGGCGGTGGAACTAGTGCCCAATTCCAGGGCGCTGGAAACCAGCAG CTGCAAGAAGAAGCTCTCAGAATCATGTCCAGCATGAGTCATTCGTACACAGATGCTCATGCTCGGACCTCGGGG ACTAGATTTCAAGGTCGTATCGCTCCATCAAAGCTCAAGTTAAAGACAGCTGCCGAACTTGGTATACCCAGGCCT GTAAAAAGGCTGAACCTTAAGATTGTGAAGCTCTTCGATTTCAGACAGGGGAAGTATCTTCCCGGTGCTCCTTTC CATGCCGATAATACAGAGTACCCGGACGACACACCTATGGCGACTGTTCTTGAAGATATCCGAACAAAGGTGGAT AATGCGTACAAGAAGGACCGAGATTATCGGGTCTATGATATAAACGAGTTCACAATGCTATGGGCTTCTGCAAGG GTCGCAGTAGACCCATCCCTCTGCACAGGGACGCTTCGTGACCTATGGCGTGCCTGCTCTGCAAACTCGCTCCTT GTCTCACCTGCCGACGTTAAAAAGAGCCTCATCGAATGGGCTGTTGCTGTGAACTATGATGAGGCTCGCAATGAT ACTGACGATGATGACACTGTTCCCAAGTTCAAGGGTAAAACAAAGGCGAGTCTATTCCGAATTTCATACACCAAT CCCAACAGATCCTTAGATGTCGGCGCCGCCGCACTTCAAGCTAACACGTCCAAGGGCGCTTCAGCCAAACGAATG CGGACAATCATACCTTCCGGAAGGAACGCCTATGTCACGAGGCTGGGTGTTGCTCAGTCTACGGGCATTGTACAC ATCGTTTTGAAAGGATACTGGACCTGGGTTGAAGACAGTGCTGTCTGGGTAGAGGAACAGGAACCCTTCAAAGTC GTGGTTGATAAGGAGTCCTTCGCCTCGGGAGTGACGAAGAAGGCCGTCAAGATGTACATTGACAAGAAAAAGTAC GCTGCAAAGTACTTTTATGACATCGACGGCAGTGGTGCTGTCTCGCATAAGGATAACCTTGTGCATCTGAAAGAT GAACTTCTCCGTGGCCACATCCTTGAGGTGGCAGCAGAGAAATTTGTGAAGTCCGCGCGCCATGCAAAGATATCG ACGTATGATATCCGGGGCCCGGCCGAGAGCTTCATTCTCACTGTTGTCGAAGGGCCCTCGAAAGGACGTGCTTGG CTCGTTGACCCACTCTTTGAGAACGCTGTTATGCGCAAGTTCTCAGGCACAGACCTGGCAGGTGCTAACAGCGAT TTGGCTGGGAGGACCTGTGACGCCTTTGCCCATTTCTCCCTTGATGACTCTGACGGTTCAGTCGTCTTTGTCGAT ATCCAAGGCATTGACTCTTCAACGCTTCCCATTACCTCGGGGATACCACTTAATGTCGCGCATTCTGTCACACTT TTCGATGTGATGATCCATAGCTCGGACGGAGTATATGGTCTGGGAGATCAAGGATGGACTGGTATTAGGGATTTC GTTACCCAGCACAAGTGTAACACAATCTGCGCAAAGCTCGGGCTACGCGATGTTCGAGAACTTTGGGATGAGTAT CACGCTGACGAGCACCCTGCCCTCGAAGACAAGAACAATAAGCCCAACGCCGATACCACATACGACCTGGATGAT GTAGACCGGCTTGAGATGGAGAATGACCCGGATGCAGACTTAGACCAAGATGGAGTCGGTGACGACAGGACTACG GCGGGAGATAATTGA |
Length | 1965 |
Sequence id | CopciAB_383673.T0 |
---|---|
Sequence |
>CopciAB_383673.T0 ATGGCTCGCTGCTCTGGCTGCTCCCAACGCTTTGACCTCCTTGTTGAGGGTACTCGCTGTGGTCGTTGCACCAAG CGCGCTCCACGGCCTAACGTTGAGGAGTGGGGGATGTGCAACAAATGCGGGGAGGTCTTTGAGTTCATGGACCAA AATGTATGTTTTGATTGCTCGAAGTATACCGCAGGTAATGGGGTACAACAGGCGAGTCGCGAAGCTATTGCGAAT CCGGTCAACGTCAGAACACATACAAATTCTGGCGGTGGAACTAGTGCCCAATTCCAGGGCGCTGGAAACCAGCAG CTGCAAGAAGAAGCTCTCAGAATCATGTCCAGCATGAGTCATTCGTACACAGATGCTCATGCTCGGACCTCGGGG ACTAGATTTCAAGGTCGTATCGCTCCATCAAAGCTCAAGTTAAAGACAGCTGCCGAACTTGGTATACCCAGGCCT GTAAAAAGGCTGAACCTTAAGATTGTGAAGCTCTTCGATTTCAGACAGGGGAAGTATCTTCCCGGTGCTCCTTTC CATGCCGATAATACAGAGTACCCGGACGACACACCTATGGCGACTGTTCTTGAAGATATCCGAACAAAGGTGGAT AATGCGTACAAGAAGGACCGAGATTATCGGGTCTATGATATAAACGAGTTCACAATGCTATGGGCTTCTGCAAGG GTCGCAGTAGACCCATCCCTCTGCACAGGGACGCTTCGTGACCTATGGCGTGCCTGCTCTGCAAACTCGCTCCTT GTCTCACCTGCCGACGTTAAAAAGAGCCTCATCGAATGGGCTGTTGCTGTGAACTATGATGAGGCTCGCAATGAT ACTGACGATGATGACACTGTTCCCAAGTTCAAGGGTAAAACAAAGGCGAGTCTATTCCGAATTTCATACACCAAT CCCAACAGATCCTTAGATGTCGGCGCCGCCGCACTTCAAGCTAACACGTCCAAGGGCGCTTCAGCCAAACGAATG CGGACAATCATACCTTCCGGAAGGAACGCCTATGTCACGAGGCTGGGTGTTGCTCAGTCTACGGGCATTGTACAC ATCGTTTTGAAAGGATACTGGACCTGGGTTGAAGACAGTGCTGTCTGGGTAGAGGAACAGGAACCCTTCAAAGTC GTGGTTGATAAGGAGTCCTTCGCCTCGGGAGTGACGAAGAAGGCCGTCAAGATGTACATTGACAAGAAAAAGTAC GCTGCAAAGTACTTTTATGACATCGACGGCAGTGGTGCTGTCTCGCATAAGGATAACCTTGTGCATCTGAAAGAT GAACTTCTCCGTGGCCACATCCTTGAGGTGGCAGCAGAGAAATTTGTGAAGTCCGCGCGCCATGCAAAGATATCG ACGTATGATATCCGGGGCCCGGCCGAGAGCTTCATTCTCACTGTTGTCGAAGGGCCCTCGAAAGGACGTGCTTGG CTCGTTGACCCACTCTTTGAGAACGCTGTTATGCGCAAGTTCTCAGGCACAGACCTGGCAGGTGCTAACAGCGAT TTGGCTGGGAGGACCTGTGACGCCTTTGCCCATTTCTCCCTTGATGACTCTGACGGTTCAGTCGTCTTTGTCGAT ATCCAAGGCATTGACTCTTCAACGCTTCCCATTACCTCGGGGATACCACTTAATGTCGCGCATTCTGTCACACTT TTCGATGTGATGATCCATAGCTCGGACGGAGTATATGGTCTGGGAGATCAAGGATGGACTGGTATTAGGGATTTC GTTACCCAGCACAAGTGTAACACAATCTGCGCAAAGCTCGGGCTACGCGATGTTCGAGAACTTTGGGATGAGTAT CACGCTGACGAGCACCCTGCCCTCGAAGACAAGAACAATAAGCCCAACGCCGATACCACATACGACCTGGATGAT GTAGACCGGCTTGAGATGGAGAATGACCCGGATGCAGACTTAGACCAAGATGGAGTCGGTGACGACAGGACTACG GCGGGAGATAATTGA |
Length | 1965 |
Sequence id | CopciAB_383673.T0 |
---|---|
Sequence |
>CopciAB_383673.T0 ATGGCTCGCTGCTCTGGCTGCTCCCAACGCTTTGACCTCCTTGTTGAGGGTACTCGCTGTGGTCGTTGCACCAAG CGCGCTCCACGGCCTAACGTTGAGGAGTGGGGGATGTGCAACAAATGCGGGGAGGTCTTTGAGTTCATGGACCAA AATGTATGTTTTGATTGCTCGAAGTATACCGCAGGTAAGATGGATCTACCCCTTTCCCCCTTTTTGCACACTAGT GCTCATATTTCTTGCTCCAGGTAATGGGGTACAACAGGCGAGTCGCGAAGCTATTGCGAATCCGGTCAACGTCAG AACACATACAAATTCTGGCGGTGGAACTAGTGCCCAATTCCAGGGCGCTGGAAACCAGCAGGTGCGACATTGTTT CACTTATAGCATTGCGAAAGACTAACATTTTGAACTGCAGCTGCAAGAAGAAGCTCTCAGAATCATGTCCAGCAT GAGTCATTCGTACACAGATGCTCATGCTCGGACCTCGGGGACTAGATTTCAAGGTCGTATCGCTCCATCAAAGCT CAAGTTAAAGACAGCTGCCGAACTTGGTATACCCAGGCCTGTAAAAAGGCTGAACCTTAAGGTATATTCTTTCAT TAGCTTGACTTCTTTTTCGGTTTACCAGCTTCGCCTTAGATTGTGAAGCTCTTCGATTTCAGACAGGGGAAGTAT CTTCCCGGTGCTCCTTTCCATGCCGATAATACAGAGTACCCGGACGACACACCTATGGCGACTGTTCTTGAAGAT ATCCGAACAAAGGTGGATAATGCGTACAAGAAGGACCGAGATTATCGGGTCTATGATATGTGAGTGCTCAATTGG CCAAAGCCAGATGTTGTATATGTCTATTAACACGATGATTCACGCTTAGAAACGAGTTCACAATGCTATGGGCTT CTGCAAGGGTCGCAGTAGACCCATCCCTCTGCACAGGGACGCTTCGTGACCTATGGCGTGCCTGCTCTGCAAACT CGCTCCTTGTCTCACCTGCCGACGTTAAAAAGAGCCTCATCGAATGGGCTGTTGCTGTGAACTATGATGAGGCTC GCAATGATACTGACGATGATGACACTGTTCCCAAGTTCAAGGGTAAAACAAAGGCGAGTCTATTCCGAATTTCAT ACACCAATCCCAACAGATCCTTAGAGTTTTGATCCACATTGCTTTAGACCACCCGTTCTAAGCGTGCTAATAGTG TCGGCGCCGCCGCACTTCAAGCTAACACGTCCAAGGGCGCTTCAGCCAAACGAATGCGTAAGTTATTTTCAATAT GATTTTATCCCTGCCCCAAGTTGATCCTCTTCACTTAGGGACAATCATACCTTCCGGAAGGAACGCCTATGTCAC GAGGCTGGGTGTTGCTCAGTCTACGGGCATTGTACACATCGTTTTGAAAGGATACTGGACCTGGGTTGAAGACAG TGCTGTCTGGGTAGAGGAACAGGAACCCTTCAAAGTCGTGGTTGATAAGGAGTCCTTCGCCTCGGGAGTGACGAA GAAGGCCGTCAAGGTTTGTCCTCATCTCAGTCTACATTGCATGCAGAGCTAACAAGACATTACATGCGAGATTAG ATGTACATTGACAAGAAAAAGTACGCTGCAAAGTACTTTTATGACATCGACGGCAGTGGTGCTGTCTCGCATAAG GATAACCTTGTGCATCTGAAAGATGAACTTCTCCGTGGCCACATCCTTGAGGTGGCAGCAGAGAAATTTGTGAAG TCCGCGCGCCATGCAAAGATATCGACGTATGGTAAGTCCTTTCTATACACCACACCTGACGGTAGTGGCTAATTC TCATTCTCTACAGATATCCGGGGCCCGGCCGAGAGCTTCATTCTCACTGTTGTCGAAGGGCCCTCGAAAGGACGT GCTTGGCTCGTTGACCCACTCTTTGAGAACGCTGTTATGCGCAAGTTCTCAGGCACAGACCTGGCAGGTGCTAAC AGCGATTTGGCTGGGAGGACCTGTGACGCCTTTGCCCATTTCTCCCTTGATGACTCTGACGGTTCAGTCGTCTTT GTCGATATCCAAGGTTAGTCATAATTCTCTGCTTTCATCTACAATCCGCCCGGCTTTGTGCTCACCAAGAGCTTC TCTAGGCATTGACTCTTCAACGCTTCCCATTACCTCGGGGATACCACTTAATGTCGCGCATTCTGTCACACTTTT CGATGTGATGATCCATAGGTAAGTCTTCAGAGCCAAGTCCAGATGATCTCAATTAACACAATTCACAGCTCGGAC GGAGTATATGGTCTGGGAGATCAAGGATGGACTGGTATTAGGGATTTCGTTACCCAGCACAAGTGTAACACAATC TGCGCAAAGCTCGGGCTACGCGATGTTCGAGAACTTTGGGATGAGTATCACGCTGACGAGCACCCTGCCCTCGAA GACAAGAACAATAAGCCCAACGCCGATACCACATACGACCTGGATGATGTAGACCGGCTTGAGATGGAGAATGAC CCGGATGCAGACTTAGACCAAGATGGAGTCGGTGACGACAGGACTACGGCGGGAGATAATTGA |
Length | 2538 |