Systematic name | CopciAB_429744 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | tmk1 | Synonyms | 429744 |
Uniprot id | Functional description | CMGC MAPK protein kinase | |
Location | scaffold_1:2430502..2432250 | Strand | - |
Gene length (nt) | 1749 | Transcript length (nt) | 1207 |
CDS length (nt) | 1092 | Protein length (aa) | 363 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Hypsizygus marmoreus strain 51987-8 | Hypma_RDB29560 | 94.4 | 2.101E-236 | 722 |
Agrocybe aegerita | Agrae_CAA7266567 | 91 | 1.01E-234 | 717 |
Pleurotus eryngii ATCC 90797 | Pleery1_1441362 | 92.5 | 1.171E-232 | 711 |
Pleurotus ostreatus PC15 | PleosPC15_2_1053841 | 92.5 | 9.959E-233 | 711 |
Pleurotus ostreatus PC9 | PleosPC9_1_53880 | 92.5 | 9.748E-233 | 711 |
Flammulina velutipes | Flave_chr08AA00827 | 90.9 | 1.865E-226 | 693 |
Lentinula edodes NBRC 111202 | Lenedo1_263629 | 87.7 | 4.215E-218 | 669 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_2340 | 87.7 | 4.182E-218 | 669 |
Lentinula edodes B17 | Lened_B_1_1_2210 | 87.8 | 1.543E-209 | 644 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_113395 | 83.1 | 5.23E-206 | 634 |
Grifola frondosa | Grifr_OBZ79590 | 83.3 | 2.824E-204 | 629 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | tmk1 |
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Protein id | CopciAB_429744.T0 |
Description | CMGC MAPK protein kinase |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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CDD | cd07849 | STKc_ERK1_2_like | - | 13 | 358 |
Pfam | PF00069 | Protein kinase domain | IPR000719 | 19 | 314 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR017441 | Protein kinase, ATP binding site |
IPR008271 | Serine/threonine-protein kinase, active site |
IPR003527 | Mitogen-activated protein (MAP) kinase, conserved site |
IPR000719 | Protein kinase domain |
IPR011009 | Protein kinase-like domain superfamily |
Go id | Term | Ontology |
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GO:0005524 | ATP binding | MF |
GO:0004672 | protein kinase activity | MF |
GO:0006468 | protein phosphorylation | BP |
GO:0004707 | MAP kinase activity | MF |
KEGG Orthology |
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K04371 |
COG category | Description |
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T | CMGC MAPK protein kinase |
Class | Family | Subfamily |
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No records |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_429744.
Sequence id | CopciAB_429744.T0 |
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Sequence |
>CopciAB_429744.T0 MSSRRNAKPLPKFEIGDDYQLLHAIGEGAYGTVAAALHKPTGRQVAIKKVLPFDHTLFCLRTLRELKLLKFFSET CVNENIISILDIIKPPSLEEFKEIYFIQELMQTDLHRVIRTQHLTDDHCQYFVYQTLRALKSIHSADIVHRDLKP ANLLLNANCDLKVCDFGLARSVKTSVPAGKEVGLMTEYVATRWYRAPEIMLSFKMYTKAIDIWAVGCILAELLTG RPLFPGRDYSHQLDLILDVIGTPSLDEFYAITSRRSRDYIRALPIRKKRPFPTLFPHASQEAIDFLTKTLTFDPK KRMTVDEALEHPYLAAYHDPEDEPVVTPLSPDYFEFDMHKDDLSKDQLKELLYQEVLSFTPSI |
Length | 363 |
Sequence id | CopciAB_429744.T0 |
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Sequence |
>CopciAB_429744.T0 ATGTCTTCTCGTAGGAACGCAAAACCTCTCCCAAAGTTCGAAATCGGTGACGATTATCAGCTACTGCATGCGATT GGAGAAGGCGCATACGGGACAGTCGCTGCTGCTCTTCACAAGCCGACAGGGCGCCAGGTCGCCATAAAGAAAGTC CTCCCTTTCGACCATACATTGTTTTGCCTCCGAACCCTTCGAGAGCTCAAGTTGCTCAAGTTCTTCTCGGAGACT TGCGTCAACGAAAATATTATTTCAATCCTGGATATTATCAAGCCTCCTTCCCTTGAAGAGTTCAAGGAGATATAC TTTATCCAGGAATTGATGCAGACTGACTTGCACCGTGTTATCCGTACTCAGCACCTCACGGACGACCACTGCCAA TACTTCGTTTACCAAACACTCCGGGCGCTCAAATCAATCCACAGCGCCGACATCGTCCACCGTGACCTCAAACCT GCTAACCTTCTTCTCAATGCCAATTGTGACCTGAAGGTTTGTGACTTTGGCCTGGCTCGCAGCGTGAAGACCAGC GTCCCCGCCGGGAAAGAAGTCGGTTTGATGACGGAGTACGTCGCCACTCGGTGGTACCGCGCTCCCGAGATCATG TTGTCCTTCAAGATGTACACCAAGGCAATTGACATCTGGGCTGTGGGCTGTATTCTTGCCGAACTTCTCACTGGA AGGCCCTTGTTCCCGGGTCGTGATTACAGCCATCAACTCGACCTGATCCTCGATGTGATTGGCACGCCCAGTCTC GATGAGTTCTATGCTATTACTTCGCGGAGGTCTCGCGACTATATTCGTGCACTTCCCATCCGCAAGAAACGCCCT TTCCCCACACTTTTCCCGCACGCCTCGCAGGAAGCTATCGATTTCTTAACCAAGACCTTGACCTTTGATCCAAAG AAACGAATGACTGTGGACGAGGCCTTGGAGCACCCTTATCTCGCGGCTTATCACGACCCCGAAGATGAGCCTGTC GTGACACCCCTTAGCCCGGACTACTTCGAATTCGACATGCACAAGGACGATCTCAGCAAAGACCAGCTGAAAGAG CTCCTCTACCAGGAAGTTTTGTCTTTCACCCCTTCTATCTAG |
Length | 1092 |
Sequence id | CopciAB_429744.T0 |
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Sequence |
>CopciAB_429744.T0 AAGTCCCTCATCGACCATCCCCCGGTGGGTTTCTGGTGTACTAAGAATGTCTTCTCGTAGGAACGCAAAACCTCT CCCAAAGTTCGAAATCGGTGACGATTATCAGCTACTGCATGCGATTGGAGAAGGCGCATACGGGACAGTCGCTGC TGCTCTTCACAAGCCGACAGGGCGCCAGGTCGCCATAAAGAAAGTCCTCCCTTTCGACCATACATTGTTTTGCCT CCGAACCCTTCGAGAGCTCAAGTTGCTCAAGTTCTTCTCGGAGACTTGCGTCAACGAAAATATTATTTCAATCCT GGATATTATCAAGCCTCCTTCCCTTGAAGAGTTCAAGGAGATATACTTTATCCAGGAATTGATGCAGACTGACTT GCACCGTGTTATCCGTACTCAGCACCTCACGGACGACCACTGCCAATACTTCGTTTACCAAACACTCCGGGCGCT CAAATCAATCCACAGCGCCGACATCGTCCACCGTGACCTCAAACCTGCTAACCTTCTTCTCAATGCCAATTGTGA CCTGAAGGTTTGTGACTTTGGCCTGGCTCGCAGCGTGAAGACCAGCGTCCCCGCCGGGAAAGAAGTCGGTTTGAT GACGGAGTACGTCGCCACTCGGTGGTACCGCGCTCCCGAGATCATGTTGTCCTTCAAGATGTACACCAAGGCAAT TGACATCTGGGCTGTGGGCTGTATTCTTGCCGAACTTCTCACTGGAAGGCCCTTGTTCCCGGGTCGTGATTACAG CCATCAACTCGACCTGATCCTCGATGTGATTGGCACGCCCAGTCTCGATGAGTTCTATGCTATTACTTCGCGGAG GTCTCGCGACTATATTCGTGCACTTCCCATCCGCAAGAAACGCCCTTTCCCCACACTTTTCCCGCACGCCTCGCA GGAAGCTATCGATTTCTTAACCAAGACCTTGACCTTTGATCCAAAGAAACGAATGACTGTGGACGAGGCCTTGGA GCACCCTTATCTCGCGGCTTATCACGACCCCGAAGATGAGCCTGTCGTGACACCCCTTAGCCCGGACTACTTCGA ATTCGACATGCACAAGGACGATCTCAGCAAAGACCAGCTGAAAGAGCTCCTCTACCAGGAAGTTTTGTCTTTCAC CCCTTCTATCTAGGACATGTTCTCTGTACTGCATCTAATGATTGCTGTGATATATACATCGATAATTGTATTTGA ATACCGG |
Length | 1207 |
Sequence id | CopciAB_429744.T0 |
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Sequence |
>CopciAB_429744.T0 AAGTCCCTCATCGACCATCCCCCGGTGGGTTTCTGGTGTACTAAGAATGTCTTCTCGTAGGAACGCAAAACCTCT CCCAAAGTTCGAAATCGGTACGGCTATCTCCTCCACAATCTGGTACATCGCTTCACCGCCCATATTTACTAGGTG ACGATTATCAGCTACTGCATGCGATTGGAGAAGGCGCATACGGGACAGTCGCTGCTGCTCTTCACAAGCCGACAG GGCGCCAGGTCGCCATAAAGAAAGTCCTCCCTTTCGACCATACATTGTTTTGCCTCCGAACCCTTCGAGAGCTCA AGTTGCTCAAGTTCTTCTCGGAGACTTGCGTCAACGAAAATGTAGATCCAGCTCCATCGTGCACCCTGTTACCTG CTGATGGCTTGCCAGATTATTTCAATCCTGGATATTATCAAGCCTCCTTCCCTTGAAGAGTTCAAGGAGATATAC TGTAAGCTCGACGCCCGTACATCGTCCCTCAGTTCCGATTCCATGCCTTCCCTCAGTTATCCAGGAATTGATGCA GACTGACTTGCACCGTGTTATCCGTACTCAGCACCTCACGGACGACCACTGCCAAGTATGTCGCTTTCAATGACC CGTTCTCAATACACTACTGACCGTCTGTGTAGTACTTCGTTTACCAAACACTCCGGGCGCTCAAATCAATCCACA GCGCCGACATCGTCCACCGTGACCTCAAACCTGCTAACCTTCTTCTCAATGCCAATTGTGACCTGAAGGTTTGTG ACTTTGGCCTGGCTCGCAGCGTGAAGACCAGCGTCCCCGCCGGGAAAGAAGTCGGTTTGATGACGGAGTACGTCG CCACTCGGTGGTACCGCGCTCCCGAGATCATGTTGTCCTTCAAGATGTACACCAAGGTAGGCGCCAGAAGTACGT GTCGTTGCTCCCGCTGGCTGAAATGTTGCCTAGGCAATTGACATCTGGGCTGTGGGCTGTATTCTTGCCGAACTT CTCACTGGAAGGCCCTTGTTCCCGGGTCGTGATTACAGCCATCAACTCGACCTGATCCTCGATGTGATTGGTTAG TTTTGCACGTTCTTTTGTCTCAAGATGGGATGTGCTAATTCCTATGCAGGCACGCCCAGTCTCGATGAGTTCTAT GCTATTACTTCGCGGAGGTCTCGCGACTATATTCGTGCACTTCCCATCCGCAAGAAACGCCCTTTCCCCACACTT TTCCCGCACGCCTCGCAGGAAGCTATCGATTTCTTAACCAAGACCTTGGTCAGTGCCCATTACCACGATAATATA TTGCAAATCGTATTTACACGCCATTCACCCTGCAGACCTTTGATCCAAAGAAACGAATGACTGTGGACGAGGCCT TGGAGCACCCTTATCTCGCGGCTTATGTACGTATTGATCGACCTTCCTGTCGATCCTGCAGGACCCTGATCAAAA TCTAGCACGACCCCGAAGATGAGCCTGTCGTGACACCCCTTAGCCCGGACTACTTCGAATTCGACAGTAAGTCTT TGCGAGTGGCAAGCTATACGCTGACTTTGACACCTCTCGTCATCAGTGCACAAGGACGATCTCAGCAAAGACCAG CTGAAAGGTGCGCGCGAGTTCGACATACCATCCACTGCTGCGTAACTGACCCCCCGAGTAGAGCTCCTCTACCAG GAAGTTTTGTCTTTCACCCCTTCTATCTAGGACATGTTCTCTGTACTGCATCTAATGATTGCTGTGATATATACA TCGATAATTGTATTTGAATACCGG |
Length | 1749 |