Systematic name | CopciAB_443555 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | KIN28 | Synonyms | 443555 |
Uniprot id | Functional description | Belongs to the protein kinase superfamily | |
Location | scaffold_6:1318256..1319981 | Strand | + |
Gene length (nt) | 1726 | Transcript length (nt) | 1329 |
CDS length (nt) | 1101 | Protein length (aa) | 366 |
Strain name | Gene / Protein name |
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Saccharomyces cerevisiae | YDL108W_KIN28 |
Schizosaccharomyces pombe | crk1 |
Neurospora crassa | prk-3 |
Aspergillus nidulans | AN8285_cdk7 |
Strain name | Gene / Protein name | Pident | E-value | Bits |
---|---|---|---|---|
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_223023 | 85.2 | 7.456E-210 | 645 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_54850 | 85.2 | 7.77E-210 | 645 |
Hypsizygus marmoreus strain 51987-8 | Hypma_RDB23688 | 83.1 | 1.709E-205 | 633 |
Flammulina velutipes | Flave_chr06AA00613 | 82.4 | 2.978E-205 | 632 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_49084 | 81.7 | 3.894E-202 | 623 |
Lentinula edodes NBRC 111202 | Lenedo1_1114778 | 76.4 | 5.577E-199 | 614 |
Pleurotus ostreatus PC15 | PleosPC15_2_1093880 | 81.2 | 1.163E-197 | 610 |
Pleurotus ostreatus PC9 | PleosPC9_1_88045 | 81.2 | 1.138E-197 | 610 |
Pleurotus eryngii ATCC 90797 | Pleery1_1442032 | 80.9 | 3.036E-197 | 609 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_3716 | 73.2 | 3.275E-196 | 606 |
Schizophyllum commune H4-8 | Schco3_2618278 | 76.8 | 9.11E-195 | 602 |
Lentinula edodes B17 | Lened_B_1_1_5495 | 83 | 3.193E-185 | 574 |
Grifola frondosa | Grifr_OBZ74110 | 74 | 2.392E-181 | 563 |
Auricularia subglabra | Aurde3_1_1328851 | 72.6 | 1.612E-174 | 544 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | KIN28 |
---|---|
Protein id | CopciAB_443555.T0 |
Description | Belongs to the protein kinase superfamily |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
---|---|---|---|---|---|
CDD | cd07841 | STKc_CDK7 | IPR037770 | 14 | 308 |
Pfam | PF00069 | Protein kinase domain | IPR000719 | 17 | 295 |
Prediction | Start | End | Score |
---|---|---|---|
No records |
Domain n | Start | End | Length |
---|---|---|---|
No records |
Accession | Description |
---|---|
IPR000719 | Protein kinase domain |
IPR037770 | Cyclin-dependent kinase 7 |
IPR017441 | Protein kinase, ATP binding site |
IPR008271 | Serine/threonine-protein kinase, active site |
IPR011009 | Protein kinase-like domain superfamily |
Go id | Term | Ontology |
---|---|---|
GO:0004672 | protein kinase activity | MF |
GO:0005524 | ATP binding | MF |
GO:0006468 | protein phosphorylation | BP |
GO:0005675 | transcription factor TFIIH holo complex | CC |
GO:0008353 | RNA polymerase II CTD heptapeptide repeat kinase activity | MF |
GO:0070985 | transcription factor TFIIK complex | CC |
KEGG Orthology |
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K02202 |
COG category | Description |
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T | Belongs to the protein kinase superfamily |
Class | Family | Subfamily |
---|---|---|
No records |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_443555.
Sequence id | CopciAB_443555.T0 |
---|---|
Sequence |
>CopciAB_443555.T0 MDIVEQANAERQRKWLKDRKVGEGAYAVVYQGREASTGRKVAIKKIKVGQFKDGLDMSAIREVKFLRELKHQNVI ELLDVFSSKKNLNLVLEFLDTDLEIIIRDRSLVFLPADIKSWMAMTFRGLEFCHRNWILHRDLKPNNLLIASDGQ LKIADFGLARDFADPGYKMTCQVITRWYRPPELLYGCRYYGTGVDIWSVGCIFAELMLRIPYLAGESDMDQLKTI FRALGTPTEEEWPGHTKLPDYVPVGQFPKTPLRDLFTAASADALNLLSKCLVYEPRKRISAREALNHPYFFALPY PTHPSKLPKPASKHATPPLGEVDGNAAGGKKRKGTKRKLSSPLEDGKGRSIARRLDFGKAAPPTSP |
Length | 366 |
Sequence id | CopciAB_443555.T0 |
---|---|
Sequence |
>CopciAB_443555.T0 ATGGACATTGTAGAGCAAGCTAACGCTGAGCGTCAAAGGAAATGGCTGAAGGACCGCAAGGTTGGTGAAGGTGCC TACGCCGTCGTTTATCAAGGCAGGGAAGCCTCGACAGGGCGTAAAGTCGCTATCAAGAAGATTAAAGTCGGCCAG TTCAAAGATGGTCTCGACATGTCTGCCATCCGTGAAGTCAAGTTTCTTCGGGAATTGAAGCACCAGAACGTCATC GAGCTTCTCGACGTATTCTCTTCGAAAAAGAATCTCAACCTCGTCCTCGAATTCTTGGACACAGACCTGGAGATT ATCATCAGAGACAGGTCGCTCGTCTTCCTCCCAGCCGACATCAAATCGTGGATGGCCATGACGTTCAGAGGGCTC GAGTTCTGCCACAGGAACTGGATCTTGCACCGGGACTTGAAACCCAACAACTTGCTCATCGCTTCAGATGGTCAA CTCAAGATCGCCGATTTCGGCCTGGCAAGGGACTTTGCAGACCCAGGGTACAAGATGACATGTCAGGTTATCACT CGATGGTATCGTCCACCAGAACTCCTTTACGGTTGTCGGTACTACGGCACCGGCGTCGACATCTGGTCCGTTGGA TGCATCTTTGCAGAACTCATGTTACGCATTCCATACCTCGCCGGGGAAAGTGATATGGACCAACTCAAGACAATA TTCCGCGCGTTGGGTACACCCACTGAGGAAGAATGGCCCGGCCACACCAAACTCCCGGATTACGTCCCAGTCGGC CAATTCCCTAAAACACCTCTCAGAGACTTGTTCACTGCAGCAAGTGCAGATGCTTTAAACCTCCTAAGCAAATGC TTGGTGTACGAACCTCGGAAACGAATTTCAGCCCGCGAGGCTCTCAATCATCCCTACTTCTTCGCACTCCCTTAT CCCACTCACCCTTCGAAACTACCGAAACCAGCAAGCAAACACGCAACTCCACCCTTAGGGGAAGTCGACGGGAAC GCAGCGGGTGGCAAGAAGAGGAAAGGGACGAAGAGGAAGCTATCTTCTCCTTTGGAGGACGGTAAAGGCAGGTCG ATTGCTCGGAGATTGGACTTTGGAAAGGCAGCACCTCCTACTTCCCCGTGA |
Length | 1101 |
Sequence id | CopciAB_443555.T0 |
---|---|
Sequence |
>CopciAB_443555.T0 AAAAAGTTGTTATCTCAGTCCATTGACGACAGTGGATTGTAACGACACTCTCGCCTTGGAATTGCTCTGAACTCA CTCACGTCTTTTTTCGAAATCCCCCCAAGTATCGCCTCGTCTACACTCTTTTATTCACAAATCCAACTGCAGGCA GCGAGGGTCGGCGACAACGAGCTATGGACATTGTAGAGCAAGCTAACGCTGAGCGTCAAAGGAAATGGCTGAAGG ACCGCAAGGTTGGTGAAGGTGCCTACGCCGTCGTTTATCAAGGCAGGGAAGCCTCGACAGGGCGTAAAGTCGCTA TCAAGAAGATTAAAGTCGGCCAGTTCAAAGATGGTCTCGACATGTCTGCCATCCGTGAAGTCAAGTTTCTTCGGG AATTGAAGCACCAGAACGTCATCGAGCTTCTCGACGTATTCTCTTCGAAAAAGAATCTCAACCTCGTCCTCGAAT TCTTGGACACAGACCTGGAGATTATCATCAGAGACAGGTCGCTCGTCTTCCTCCCAGCCGACATCAAATCGTGGA TGGCCATGACGTTCAGAGGGCTCGAGTTCTGCCACAGGAACTGGATCTTGCACCGGGACTTGAAACCCAACAACT TGCTCATCGCTTCAGATGGTCAACTCAAGATCGCCGATTTCGGCCTGGCAAGGGACTTTGCAGACCCAGGGTACA AGATGACATGTCAGGTTATCACTCGATGGTATCGTCCACCAGAACTCCTTTACGGTTGTCGGTACTACGGCACCG GCGTCGACATCTGGTCCGTTGGATGCATCTTTGCAGAACTCATGTTACGCATTCCATACCTCGCCGGGGAAAGTG ATATGGACCAACTCAAGACAATATTCCGCGCGTTGGGTACACCCACTGAGGAAGAATGGCCCGGCCACACCAAAC TCCCGGATTACGTCCCAGTCGGCCAATTCCCTAAAACACCTCTCAGAGACTTGTTCACTGCAGCAAGTGCAGATG CTTTAAACCTCCTAAGCAAATGCTTGGTGTACGAACCTCGGAAACGAATTTCAGCCCGCGAGGCTCTCAATCATC CCTACTTCTTCGCACTCCCTTATCCCACTCACCCTTCGAAACTACCGAAACCAGCAAGCAAACACGCAACTCCAC CCTTAGGGGAAGTCGACGGGAACGCAGCGGGTGGCAAGAAGAGGAAAGGGACGAAGAGGAAGCTATCTTCTCCTT TGGAGGACGGTAAAGGCAGGTCGATTGCTCGGAGATTGGACTTTGGAAAGGCAGCACCTCCTACTTCCCCGTGAT ACTATTTAAACCTTGTGGTATGTTATGGTATGTTATACTGTTGGACGCATGACC |
Length | 1329 |
Sequence id | CopciAB_443555.T0 |
---|---|
Sequence |
>CopciAB_443555.T0 AAAAAGTTGTTATCTCAGTCCATTGACGACAGTGGATTGTAACGACACTCTCGCCTTGGAATTGCTCTGAACTCA CTCACGTCTTTTTTCGAAATCCCCCCAAGTATCGCCTCGTCTACACTCTTTTATTCACAAATCCAACTGCAGGCA GCGAGGGTCGGCGACAACGAGCTATGGACATTGTAGAGCAAGCTAACGCTGAGCGTCAAAGGAAATGGTCTGCTG CAGCTTGCCTTATCGTTGTTGGAAGGGAACTAAACTAGGCTCTGCAGGCTGAAGGACCGCAAGGTTGGTGAAGGT GCCTACGCCGTCGTTTATCAAGGTGCGCAACCATGCATGTCAACGCCGGTCTCTCACAGGGCTAAATGGACTATG AACAGGCAGGGAAGCCTCGACAGGGCGTAAAGTCGCTATCAAGAAGATTAAAGTCGGCCAGTTCAAAGATGGTCT CGACATGTCTGCCATCCGTGAAGTCAAGTTTCTTCGGGAATTGAAGCACCAGAACGTCATCGAGGTATGGATATA TACCTCGTGCGTCATGCATACGGCCATTCAGAAAGCATTTTCTTTAGCTTCTCGACGTATTCTCTTCGAAAAAGA ATCTCAACCTCGTCCTCGAATTCTTGGACACAGACCTGGAGATTATCATCAGAGACAGGTCGCTCGTCTTCCTCC CAGCCGACATCAAATCGTGGATGGCCATGACGTTCAGAGGGCTCGAGTTCTGCCACAGGAACTGGATCTTGCACC GGGTACGTTCCGCTGTCTCATGTCGTTCTCCATCCAACCTCATTTCCTTTCAAATAGGACTTGAAACCCAACAAC TTGCTCATCGCTTCAGATGGTCAACTCAAGATCGCCGATTTCGGCCTGGCAAGGGACTTTGCAGACCCAGGGTAC AAGATGACATGTCAGGTTATCACTCGGTGCGTCCGTGCTTGTCTTCACCCGGTCCTTTGTACTTATCCTGCTCGT CTAGATGGTATCGTCCACCAGAACTCCTTTACGGTTGTCGGTACTACGGCACCGGCGTCGACATCTGGTCCGTTG GATGCATCTTTGCAGAACTCATGTTACGCATTCCATACCTCGCCGGGGAAAGTGATATGGACCAACTCAAGACAA TATTCCGCGCGTTGGGTACACCCACTGAGGAAGAATGGCCCGTATGTCTTTCCCTCCTTACTCTTAAGAAGAAAA GTAATCACCGTTTCGATCTGCGTAGGGCCACACCAAACTCCCGGATTACGTCCCAGTCGGCCAATTCCCTAAAAC ACCTCTCAGAGACTTGTTCACTGCAGCAAGTGCAGATGCTTTAAACCTCCTAAGCAAATGCTTGGTGTACGAACC TCGGAAACGAATTTCAGCCCGCGAGGTACGACTCCTTCCTGCATGCCACACTATGGCACATCTAACTGTTGAAAA CTACACTAGGCTCTCAATCATCCCTACTTCTTCGCACTCCCTTATCCCACTCACCCTTCGAAACTACCGAAACCA GCAAGCAAACACGCAACTCCACCCTTAGGGGAAGTCGACGGGAACGCAGCGGGTGGCAAGAAGAGGAAAGGGACG AAGAGGAAGCTATCTTCTCCTTTGGAGGACGGTAAAGGCAGGTCGATTGCTCGGAGATTGGACTTTGGAAAGGCA GCACCTCCTACTTCCCCGTGATACTATTTAAACCTTGTGGTATGTTATGGTATGTTATACTGTTGGACGCATGAC C |
Length | 1726 |