Systematic name | CopciAB_448193 | Strain | Coprinopsis cinerea Okayama 7 |
---|---|---|---|
Standard name | - | Synonyms | 448193 |
Uniprot id | Functional description | Protein kinase domain | |
Location | scaffold_7:938297..940617 | Strand | - |
Gene length (nt) | 2321 | Transcript length (nt) | 1910 |
CDS length (nt) | 1680 | Protein length (aa) | 559 |
Strain name | Gene / Protein name |
---|---|
Strain name | Gene / Protein name | Pident | E-value | Bits |
---|---|---|---|---|
Agrocybe aegerita | Agrae_CAA7261348 | 64.2 | 1.331E-222 | 693 |
Pleurotus ostreatus PC9 | PleosPC9_1_133802 | 61.9 | 9.528E-215 | 670 |
Pleurotus ostreatus PC15 | PleosPC15_2_1078238 | 61.9 | 2.157E-214 | 669 |
Hypsizygus marmoreus strain 51987-8 | Hypma_RDB18061 | 59.4 | 3.224E-213 | 666 |
Pleurotus eryngii ATCC 90797 | Pleery1_561888 | 61.3 | 1.356E-212 | 664 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_23007 | 59.5 | 2.216E-206 | 646 |
Lentinula edodes NBRC 111202 | Lenedo1_1161755 | 59.5 | 2.233E-206 | 646 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_224283 | 56.6 | 3.661E-206 | 645 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_106913 | 56.6 | 8.453E-206 | 644 |
Schizophyllum commune H4-8 | Schco3_1150677 | 55.3 | 5.843E-196 | 616 |
Grifola frondosa | Grifr_OBZ71290 | 55.9 | 1.234E-193 | 609 |
Flammulina velutipes | Flave_chr05AA00411 | 57.2 | 1.627E-180 | 571 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_46990 | 52.9 | 1.902E-178 | 565 |
Lentinula edodes B17 | Lened_B_1_1_8726 | 75.9 | 2.63E-130 | 425 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Systematic name | - |
---|---|
Protein id | CopciAB_448193.T0 |
Description | Protein kinase domain |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
---|---|---|---|---|---|
CDD | cd14016 | STKc_CK1 | - | 37 | 306 |
Pfam | PF00069 | Protein kinase domain | IPR000719 | 40 | 254 |
Prediction | Start | End | Score |
---|---|---|---|
No records |
Domain n | Start | End | Length |
---|---|---|---|
No records |
Accession | Description |
---|---|
IPR000719 | Protein kinase domain |
IPR011009 | Protein kinase-like domain superfamily |
IPR017441 | Protein kinase, ATP binding site |
Go id | Term | Ontology |
---|---|---|
GO:0004672 | protein kinase activity | MF |
GO:0005524 | ATP binding | MF |
GO:0006468 | protein phosphorylation | BP |
KEGG Orthology |
---|
K02218 |
K08960 |
COG category | Description |
---|---|
T | Protein kinase domain |
Class | Family | Subfamily |
---|---|---|
No records |
Group |
---|
No records |
Arrow shows the origin of gene family containing CopciAB_448193.
Sequence id | CopciAB_448193.T0 |
---|---|
Sequence |
>CopciAB_448193.T0 MSTSHSGSDSDCYSSGYSDSDDDVVERKKAIPRVLANYYLEQVLGSGYSGSIYRAKHLHTGKVVALKVQDVDHEC PTNRYERYLYPYLQGGKGMPTLWAAGMQGGWDYLAIDLLGPSLDNLFRQTGKDTMDLGSVCSIAMQLIARLQFMH TRGVLHRDIQLGNCVIGLPPNDKTIYMIDFGFSKQYIDPHTKRHITDSRSKRSFIGNYWFSSVNVHCRGRVPSRR DDLEAAALMLIHLLTPRGLTWTRNGIPKTDEAHDALMDEKRAARPEDLCRGLPVEFEDFLRYTRKLKFEQCPDYE TWIENFRQLKVESGYSPSEDLVWPPQPPQMRKPVTIHTPLRIRVPGAVHRDEMEGILNGLTNLNLQAARPVLGDR TNVVPRTLLLSKEKPVATVNVSSGSEENKSALPQRRYAKPKAMILLDLAKKASTATDNASLARLVKEFVKALQMN SSRTLTKEGSQFLDVLYKQLDDPSVFIPPKRPSRGRSTIEQQQQEPARAKFGVIARLRYEVKSAPSNKALGSLVS DFAKVTNKCVGRTITKDGFVFLEGVAERLAALGR |
Length | 559 |
Sequence id | CopciAB_448193.T0 |
---|---|
Sequence |
>CopciAB_448193.T0 ATGTCCACATCCCACTCTGGTAGCGATTCGGATTGCTATTCAAGCGGATACAGTGATTCGGATGATGACGTTGTA GAACGCAAGAAGGCTATTCCTCGCGTCCTTGCAAATTACTACCTCGAACAGGTCCTTGGATCAGGCTACTCTGGC TCTATCTACAGGGCGAAGCATCTACATACCGGAAAAGTTGTAGCCCTCAAAGTCCAAGATGTCGACCACGAATGT CCAACAAATCGATACGAACGCTACCTCTACCCATATTTGCAGGGAGGGAAGGGGATGCCGACACTGTGGGCCGCT GGGATGCAGGGAGGCTGGGATTACCTTGCCATTGATCTTCTGGGTCCAAGTTTGGATAACCTTTTCAGACAGACT GGAAAGGATACCATGGATCTAGGCAGCGTTTGTTCAATCGCCATGCAACTCATCGCCCGATTACAATTCATGCAC ACAAGAGGTGTCCTTCATCGAGATATTCAACTCGGAAACTGTGTCATTGGCCTTCCACCCAACGACAAGACGATT TACATGATTGATTTCGGGTTTTCGAAACAGTATATTGACCCGCACACTAAACGCCACATCACCGACAGTCGGTCG AAGCGGAGCTTTATTGGCAATTACTGGTTCAGTTCAGTCAACGTCCATTGCAGAGGCCGAGTACCGTCACGGCGA GATGACCTCGAGGCAGCGGCCCTGATGCTTATCCATCTCCTAACACCAAGAGGGCTGACCTGGACACGCAACGGC ATCCCTAAAACTGATGAAGCACACGATGCGTTGATGGATGAAAAACGCGCAGCCAGGCCTGAAGATCTATGTCGA GGCCTACCGGTCGAGTTCGAAGACTTCCTTCGGTACACGCGCAAACTCAAGTTTGAACAATGTCCCGACTACGAA ACTTGGATAGAGAACTTCAGACAGCTGAAGGTAGAGAGTGGCTATTCTCCGAGTGAGGATCTGGTTTGGCCGCCA CAACCTCCACAAATGCGCAAACCGGTTACCATTCACACCCCACTCCGTATTCGCGTGCCCGGTGCGGTGCATCGA GATGAGATGGAGGGTATCCTTAATGGATTAACCAATCTCAACCTTCAGGCTGCCAGGCCTGTTTTGGGAGATCGG ACCAACGTGGTTCCCCGCACATTACTGCTATCGAAGGAGAAGCCGGTAGCCACGGTTAATGTTAGCAGTGGCTCA GAGGAGAACAAATCGGCGCTTCCCCAACGTCGCTACGCCAAACCGAAGGCAATGATATTGTTGGACCTGGCAAAG AAGGCGTCAACCGCTACCGACAATGCTTCACTAGCTCGACTGGTGAAGGAGTTTGTCAAGGCGTTGCAGATGAAC AGTTCGAGAACGTTGACCAAGGAGGGATCCCAGTTCCTCGATGTGCTGTACAAGCAATTGGACGATCCTTCGGTG TTCATCCCTCCAAAGCGGCCAAGCCGAGGAAGGTCTACTATTGAGCAGCAGCAGCAGGAACCAGCTCGCGCCAAG TTTGGGGTTATAGCGCGACTCCGCTATGAAGTCAAGTCTGCACCAAGCAACAAGGCCCTTGGGAGCCTCGTGTCG GATTTCGCGAAGGTGACGAACAAATGTGTTGGAAGAACCATTACAAAAGATGGCTTCGTGTTCCTTGAAGGCGTG GCAGAACGACTCGCTGCTCTCGGTCGCTAA |
Length | 1680 |
Sequence id | CopciAB_448193.T0 |
---|---|
Sequence |
>CopciAB_448193.T0 AGCGTGCACCTCGAGCCGCTCATCTGCTGCCCGCGCCGCCTTGCGTTGGTCACATCTGACGCCGACAACAAGCAA GAATCGTCCGTTCGTCGACGAAACAGCCACCCGAGCGAGGCCACCTTGACTGGAAGCGAAACGAGTACCATTCGC CATGTCCACATCCCACTCTGGTAGCGATTCGGATTGCTATTCAAGCGGATACAGTGATTCGGATGATGACGTTGT AGAACGCAAGAAGGCTATTCCTCGCGTCCTTGCAAATTACTACCTCGAACAGGTCCTTGGATCAGGCTACTCTGG CTCTATCTACAGGGCGAAGCATCTACATACCGGAAAAGTTGTAGCCCTCAAAGTCCAAGATGTCGACCACGAATG TCCAACAAATCGATACGAACGCTACCTCTACCCATATTTGCAGGGAGGGAAGGGGATGCCGACACTGTGGGCCGC TGGGATGCAGGGAGGCTGGGATTACCTTGCCATTGATCTTCTGGGTCCAAGTTTGGATAACCTTTTCAGACAGAC TGGAAAGGATACCATGGATCTAGGCAGCGTTTGTTCAATCGCCATGCAACTCATCGCCCGATTACAATTCATGCA CACAAGAGGTGTCCTTCATCGAGATATTCAACTCGGAAACTGTGTCATTGGCCTTCCACCCAACGACAAGACGAT TTACATGATTGATTTCGGGTTTTCGAAACAGTATATTGACCCGCACACTAAACGCCACATCACCGACAGTCGGTC GAAGCGGAGCTTTATTGGCAATTACTGGTTCAGTTCAGTCAACGTCCATTGCAGAGGCCGAGTACCGTCACGGCG AGATGACCTCGAGGCAGCGGCCCTGATGCTTATCCATCTCCTAACACCAAGAGGGCTGACCTGGACACGCAACGG CATCCCTAAAACTGATGAAGCACACGATGCGTTGATGGATGAAAAACGCGCAGCCAGGCCTGAAGATCTATGTCG AGGCCTACCGGTCGAGTTCGAAGACTTCCTTCGGTACACGCGCAAACTCAAGTTTGAACAATGTCCCGACTACGA AACTTGGATAGAGAACTTCAGACAGCTGAAGGTAGAGAGTGGCTATTCTCCGAGTGAGGATCTGGTTTGGCCGCC ACAACCTCCACAAATGCGCAAACCGGTTACCATTCACACCCCACTCCGTATTCGCGTGCCCGGTGCGGTGCATCG AGATGAGATGGAGGGTATCCTTAATGGATTAACCAATCTCAACCTTCAGGCTGCCAGGCCTGTTTTGGGAGATCG GACCAACGTGGTTCCCCGCACATTACTGCTATCGAAGGAGAAGCCGGTAGCCACGGTTAATGTTAGCAGTGGCTC AGAGGAGAACAAATCGGCGCTTCCCCAACGTCGCTACGCCAAACCGAAGGCAATGATATTGTTGGACCTGGCAAA GAAGGCGTCAACCGCTACCGACAATGCTTCACTAGCTCGACTGGTGAAGGAGTTTGTCAAGGCGTTGCAGATGAA CAGTTCGAGAACGTTGACCAAGGAGGGATCCCAGTTCCTCGATGTGCTGTACAAGCAATTGGACGATCCTTCGGT GTTCATCCCTCCAAAGCGGCCAAGCCGAGGAAGGTCTACTATTGAGCAGCAGCAGCAGGAACCAGCTCGCGCCAA GTTTGGGGTTATAGCGCGACTCCGCTATGAAGTCAAGTCTGCACCAAGCAACAAGGCCCTTGGGAGCCTCGTGTC GGATTTCGCGAAGGTGACGAACAAATGTGTTGGAAGAACCATTACAAAAGATGGCTTCGTGTTCCTTGAAGGCGT GGCAGAACGACTCGCTGCTCTCGGTCGCTAAGTTGAAGGACATTTACATAATCTTATCTATTGTACATAGCAGGC TGAAGCATCTATATCATAAATAATGTTGTACCAGT |
Length | 1910 |
Sequence id | CopciAB_448193.T0 |
---|---|
Sequence |
>CopciAB_448193.T0 AGCGTGCACCTCGAGCCGCTCATCTGCTGCCCGCGCCGCCTTGCGTTGGTCACATCTGACGCCGACAACAAGCAA GAATCGTCCGTTCGTCGACGAAACAGCCACCCGAGCGAGGCCACCTTGACTGGAAGCGAAACGAGTACCATTCGC CATGTCCACATCCCACTCTGGTAGCGATTCGGATTGCTATTCAAGCGGATACAGTGATTCGGATGATGACGTTGT AGAACGCAAGAAGGCTATTCCTCGCGTCCTTGCAAATTACTACCTCGAACAGGTCCTTGGATCAGGCTACTCTGG TACGAACACCTCATCCATCGCAAGAGGCATTTTGCCTTCGATGAAGACTGTGGTTAACTAGGCTCGCAATAGGCT CTATCTACAGGGCGAAGCATCTACATACCGGAAAAGTTGTAGCCCTCAAAGTCCAAGATGTCGACCACGAATGTC CAACAAATCGATACGAACGCTACCTCTACCCATATTTGCAGGGAGGGAAGGGGATGCCGACACTGTGGGCCGCTG GGATGCAGGGAGGCTGGGATTACCTTGCCATTGATCTTCTGGGTCCAAGTTTGGATAACCTTTTCAGACAGACTG GAAAGGATACCATGGATCTAGGCAGCGTTTGTTCAATCGCCATGCAACTCGTCAGTCAACCTTGTTTCCGAGGAT CCAGCACACCAGCAATACTGACGATGGTGTTTTAGATCGCCCGATTACAATTCATGCACACAAGAGGTGTCCTTC ATCGAGATATTCAACTCGGAAACTGTGTCATTGGCCTTCCACCCAACGACAAGACGATTTACATGATTGATTTCG GGTTTTCGAAACAGTATATTGACCCGCACACTAAACGCCACATCACCGACAGTCGGTCGAAGCGGAGCTTTATTG GCAATTACTGGTTCAGGTGTGTCGGCTTTGTTTCACGGCTTTGTTGGAGGGTCTAACGAGGCATGCCAGTTCAGT CAACGTCCATTGCAGAGGCCGAGGTCAGTTCATTTGCTTCCTACTGCATTGCTGTCATTTTATGAAATCCAATGT CTGCAGTACCGTCACGGCGAGATGACCTCGAGGCAGCGGCCCTGATGCTTATCCATCTCCTAACACCAAGAGGGC TGACCTGGACACGCAACGGCATCCCTAAAACTGATGAAGCACACGATGCGTTGATGGATGAAAAACGCGCAGCCA GGCCTGAAGATCTATGTCGAGGCCTACCGGTCGAGTTCGAAGACTTCCTTCGGTACACGCGCAAACTCAAGTTTG AACAATGTCCCGACTACGAAACTTGGATAGAGAACTTCAGACAGCTGAAGGTAGAGAGTGGCTATTCTCCGAGTG AGGATCTGGTTTGGCCGCCACAACCTCCACAAATGGTGAGTTCTCTAAATGGTTAGATGGATTTGGAGACTGAAG TGCCTCTAGCGCAAACCGGTTACCATTCACACCCCACTCCGTATTCGCGTGCCCGGTGCGGTGCATCGAGATGAG ATGGAGGGTATCCTTAATGGATTAACCAATCTCAACCTTCAGGCTGCCAGGCCTGTTTTGGGAGATCGGACCAAC GTGGTTCCCCGCACATTACTGCTATCGAAGGAGAAGCCGGTAGCCACGGTTAATGTTAGCAGTGGCTCAGAGGAG AACAAATCGGCGCTTCCCCAACGTCGCTACGCCAAACCGAAGGCAATGATATTGTTGGACCTGGCAAAGAAGGCG TCAACCGCTACCGACAATGCTTCACTAGCTCGACTGGTGAAGGAGTTTGTCAAGGCGTTGCAGATGAACAGTTCG AGAACGTTGACCAAGGAGGGATCCCAGTTCCTCGATGTGCTGTACAAGCAATTGGACGATCCTTCGGTGTTCATC CCTCCAAAGCGGTGCGTATGAATTGGCGCAGTGATCGGAACGGGAAAGTTGACCCCCCGTATCTACATTTTATTC AGGCCAAGCCGAGGAAGGTCTACTATTGAGCAGCAGCAGCAGGAACCAGCTCGCGCCAAGTTTGGGGTTATAGCG CGACTCCGCTATGAAGTCAAGTCTGCACCAAGCAACAAGGCCCTTGGGAGCCTCGTGTCGGATTTCGCGAAGGTG ACGAACAAATGTGTTGGAAGAACCATTACAAAAGTGAGTTGACGGGTTTGTCTGGTATTCGGAGAGGAATTAATT CGGCTCCCAGGATGGCTTCGTGTTCCTTGAAGGCGTGGCAGAACGACTCGCTGCTCTCGGTCGCTAAGTTGAAGG ACATTTACATAATCTTATCTATTGTACATAGCAGGCTGAAGCATCTATATCATAAATAATGTTGTACCAGT |
Length | 2321 |