CopciAB_448807
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_448807 Strain Coprinopsis cinerea Okayama 7
Standard name - Synonyms 448807
Uniprot id Functional description Protein tyrosine kinase
Location scaffold_7:1289872..1294910 Strand -
Gene length (nt) 5039 Transcript length (nt) 4271
CDS length (nt) 3582 Protein length (aa) 1193

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7265469 44.8 2.557E-291 924
Hypsizygus marmoreus strain 51987-8 Hypma_RDB19031 44.1 7.628E-263 841
Lentinula edodes W1-26 v1.0 Lentinedodes1_18980 40.3 8.725E-229 741
Grifola frondosa Grifr_OBZ68659 38 5.201E-204 668
Lentinula edodes B17 Lened_B_1_1_8870 39.2 3.198E-192 633
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_206963 61.7 6.594E-149 504
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_74143 61.7 3.188E-148 502
Flammulina velutipes Flave_chr05AA00608 43.8 1.368E-128 443
Pleurotus ostreatus PC15 PleosPC15_2_1045079 62.6 2.636E-127 439
Pleurotus ostreatus PC9 PleosPC9_1_97368 62.6 2.581E-127 439
Schizophyllum commune H4-8 Schco3_2491745 56.2 1.59E-126 437
Pleurotus eryngii ATCC 90797 Pleery1_1397771 62.2 1.369E-125 434
Ganoderma sp. 10597 SS1 v1.0 Gansp1_46702 62.3 3.771E-115 402
Auricularia subglabra Aurde3_1_1276739 33.3 1.738E-105 373
Lentinula edodes NBRC 111202 Lenedo1_401861 57.3 4.753E-105 371

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 49.1567 4.9652 2.8666
oidia 113.7875 21.3241 12.3115
vegetative_mycelium 111.0102 31.5646 18.2238
primordia 86.7657 6.972 4.0253
hyphal_knot 45.8848 3.0472 1.7593
young_fruiting_body 61.1557 3.2589 1.8815
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 45.7065 4.9039 2.8313
Wheat bran 45.8466 18.5974 10.7372
Horse manure 89.9833 38.2881 22.1057
Oak leaves 80.0072 25.3477 14.6345
Hay 74.315 23.5482 13.5956
Corn stalk 85.4622 21.1497 12.2108
Pectine 85.6789 3.4861 2.0127
Microcrystalline cellulose 49.7138 12.3053 7.1044
Xylose 44.2169 12.1512 7.0155
Cellobiose 41.5369 11.6638 6.7341
Lignin 79.9965 32.5795 18.8098
Apple peels 66.8276 1.9139 1.105
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 110.6254 6.5701 3.7933
Bsubtilis 89.8013 5.3576 3.0932
Ecoli 58.8888 7.8463 4.5301
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 3.2106 2.1026 1.214
BS 4h 11.6204 1.9322 1.1156
BS 8h 29.5933 5.2752 3.0456
BS 12h 27.4482 1.6345 0.9437
Oidia 0 h 3.4548 0.8973 0.518
Oidia 18 h 41.651 5.9988 3.4634
Sclerotia 34.0978 8.7469 5.05
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 100.6676 21.1135 12.1899
DM 36h 139.2144 7.645 4.4139
DM 60h 124.7224 6.0125 3.4713
DM 84h 99.4761 6.7643 3.9054
DM 108h 105.784 15.3448 8.8593
DM 132h 90.5211 19.9486 11.5173
DM 156hAE 80.8321 9.9699 5.7562
ELI1hAE 113.1039 17.7681 10.2584
ELI2hAE 121.4208 26.2997 15.1842
LI2hAE 121.0926 10.7805 6.2242
LI6hAE 102.9148 5.977 3.4508
LI12hAE 117.2468 13.6708 7.8929
LI18hAE 86.9523 33.3427 19.2504
LI 24hAE 77.2735 18.7739 10.8391
DM 156hAM 84.0771 2.3688 1.3676
ELI1hAM 127.1555 43.6055 25.1757
ELI2hAM 149.8748 34.1155 19.6966
LI2hAM 137.3252 24.7721 14.3022
LI6hAM 138.8388 5.4471 3.1449
LI12hAM 91.5777 2.7248 1.5731
LI18hAM 67.7434 24.2494 14.0004
LI 24hAM 27.5577 4.0625 2.3455
LI 24hHK 71.8475 20.6493 11.9219
L/D 6h 52.6277 7.8025 4.5048
L/D 12h 53.4884 28.759 16.604
L/D 18h 109.2342 22.0006 12.7021
L/D 24h 162.5885 31.7333 18.3212
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 17.1739 7.9089 4.5662
Hyphal knots 53.522 23.8973 13.7971
Primordium 1 101.596 34.2695 19.7855
Primordium 2 76.2076 13.4217 7.749
Young Fruiting body cap 173.2349 36.9977 21.3606
Younf fruiting body gill 35.6667 2.024 1.1686
Young fruiting body stipe 79.0596 23.5962 13.6232
Mature fruiting body cap_gill 49.46 14.0163 8.0923
Mature fruiting body stipe 30.3308 3.0648 1.7695
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 66.2471 8.4851 4.8989
NH4NO3 90.4636 7.7337 4.4651
Proline 102.0549 10.5038 6.0644
Tryptophan 96.3188 43.9105 25.3517
Isoleucin 96.0132 3.5615 2.0562
Arginine 146.2449 8.3702 4.8325
Metionine 107.5945 6.0039 3.4663
NaNO3 114.7375 8.7126 5.0302
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 66.2471 8.4851 4.8989
Citrus peel 92.4064 19.3584 11.1766
Poplar leaves 86.0776 20.774 11.9939
Typha leaves 92.4871 6.1742 3.5647
Overwintered Salix leaves 93.6757 10.3802 5.993
Reed flowering 80.6452 9.6017 5.5435
Tigernut 67.4099 9.0372 5.2176
Energy cane 78.0514 11.4158 6.5909
Guar gum 84.7335 18.4083 10.628
Apple peels 122.3334 32.4629 18.7425
Cellobiose 147.3151 3.1514 1.8195
Corn stalk 119.6637 20.8569 12.0417
Horse manure 94.5669 44.4592 25.6685
Lignin 59.1122 20.3249 11.7346
Microcrystalline cellulose 115.8056 20.1041 11.6071
Oak leaves 104.6651 23.7727 13.7252
Pectin esterified 71.7616 11.5354 6.6599
Poplar sawdust 93.7596 32.3763 18.6925
Wheat bran 52.6312 14.3014 8.2569
Chlamydomonas reinhardtii 71.6765 20.2448 11.6884
Vertatryl alcohol 27.9716 6.729 3.885
Furfural 68.1846 7.2693 4.1969
Autoclaved mycelium 91.6303 8.0126 4.6261
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 166.435 14.6149 8.4379
Ribose 170.5882 3.4494 1.9915
Mannose 194.2808 6.9985 4.9487
Fructose 166.8119 10.0388 5.7959
Arabinose 174.3602 7.8459 4.5298
Xylose 177.8624 2.6411 1.5248
Galacturonic acid 166.9735 14.1219 8.1533
Rhamnogalacturonan 170.6171 6.6807 3.8571
Pectin esterified 160.8284 7.075 4.0848
Polygalacturonic acid 149.7705 23.8277 13.7569
Sodium acetate 174.4698 4.6572 2.6889
No nitrogen 167.1337 21.7777 12.5734
BSA 159.7565 19.0766 11.0139
Glutamine 161.6287 14.2768 8.2427
No phosphate 222.9396 23.5142 13.5759
No carbon 157.9492 2.7622 1.9532
No sulphur 204.0139 39.7583 22.9545
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 66.2471 8.4851 4.8989
Amylose 63.0933 11.5334 6.6588
Fucose 57.3286 2.8124 1.6238
Galactose 68.1573 3.5917 2.0737
Lactose 79.1323 4.0431 2.3343
Maltose 75.5196 8.1197 4.6879
Mannitol 73.781 9.0071 5.2003
Rhamnose 63.2042 14.7176 8.4972
Sorbitol 68.2747 9.0217 5.2087
Trehalose 65.4221 4.6488 2.684
Glycerol 68.366 16.8644 9.7367
Glucuronic acid 72.5847 21.5844 12.4618
Arabinan 58.0386 12.4626 7.1953
Galactan 92.1651 17.3356 10.0087
Galactomannan 70.5915 13.1879 7.6141
Glucan 80.6136 11.6311 6.7152
Xylan 81.5702 12.9111 7.4542
Xyloglucan 85.565 14.0562 8.1154
Arabinogalactan 80.3453 8.6542 4.9965
Pectin 14.7316 9.583 5.5327
Rhamnogalacturonan 24.3737 11.0974 6.4071
Polygalacturonic acid 56.0476 9.0791 5.2418
Mannan 64.6119 6.8875 3.9765
Amylopectin 50.5269 12.0981 6.9848
Inulin 86.2582 5.8826 3.3963
BSA 89.0203 11.26 6.5009
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 124.7224 6.0125 3.4713
2h WAT 114.2697 3.625 2.0929
4h WAT 112.3068 3.0336 1.7514
8h WAT 100.1602 25.6981 14.8368
16h WAT 90.1509 8.9681 5.1778
24h WAT 87.7737 5.8394 3.3714
WAT hyphal knot -30h 146.9899 10.4586 6.0383
WAT hyphal knot -22h 169.1012 11.9246 6.8846
WAT hyphal knot -15h 159.3883 20.9522 12.0967
WAT hyphal knot -7.5h 91.525 28.2633 16.3178
WAT hyphal knot 135.0051 10.4316 6.0227
WAT hyphal knot +7.5h 79.6468 22.2642 12.8543
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 112.976 55.3479 31.9551
Straw 3h 71.4867 5.8169 3.3584
Straw 6h 62.1521 31.621 18.2564
Straw 12h 115.6352 20.6598 11.9279
Straw 24h 99.0438 45.0308 25.9986
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 118.9667 10.3973 6.0029
Frost (-20C, 30min) 48.868 7.6161 4.3971
Heat shock (47C, 2h) 24.4137 3.1264 1.805
High CO2 69.947 4.9819 2.8763
Drought (4% agar, 12h) 73.0521 19.1354 11.0478
Oxidative (1mM H2O2, 3h) 50.8027 4.5277 2.614
Acidic (pH4, 3h) 80.4375 11.9481 6.8982
Alkaline (pH9, 3h) 91.8671 10.9444 6.3188
Osmotic (sorbitol 2h) 49.0916 12.1865 7.0359
CongoRed (3h) 72.504 20.6072 11.8976
Cobalt chloride control 43.5291 9.6859 5.5921
Cobalt chloride 2mM 40.5899 10.0092 5.7788
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 74.8022 17.1729 9.9148
Cold stimulation 70.2692 12.1362 7.0068
Scratched surface 155.3748 12.7741 7.3752
Ca2+, 200mM, 24h 50.8754 7.6628 4.4241
Cu2+, 2mM, 6h 82.8477 27.4065 15.8231
Voriconazole 63.7806 6.6988 3.8675
Trichoderma interaction, early 128.4308 29.8711 17.2461
Trichoderma interaction 60h 52.8609 15.3042 8.8359
Cobalt chloride 2mM repeat 111.5052 14.8814 8.5918
Hypoxia 73.0575 6.1208 3.5338
Hypoxia control 57.4081 13.7406 7.9332
Protoplastation control 48.6433 7.704 5.4476
Protoplastation 3.5h 31.8807 4.2628 3.0142
Protoplastation 1.5h 58.4716 25.3255 17.9078

General data

Systematic name -
Protein id CopciAB_448807.T0
Description Protein tyrosine kinase

Annotation summary

0 300 600 900 1193

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd14014 STKc_PknB_like - 38 307
Pfam PF00069 Protein kinase domain IPR000719 38 309

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR000719 Protein kinase domain
IPR045269 Serine/threonine-protein kinase Atg1-like
IPR008271 Serine/threonine-protein kinase, active site
IPR011009 Protein kinase-like domain superfamily

GO

Go id Term Ontology
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP
GO:0004674 protein serine/threonine kinase activity MF
GO:0006914 autophagy BP

KEGG

KEGG Orthology
K08798

EggNOG

COG category Description
T Protein tyrosine kinase

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_448807 across fungi.

Arrow shows the origin of gene family containing CopciAB_448807.

Protein

Sequence id CopciAB_448807.T0
Sequence >CopciAB_448807.T0
MDSSSSSRTNSPTSPLEQEPNDVFSIDDDTVSAELDFVEEIGNGNWGSVWLVRPKRSRPQCHHPAFKVGGRKFAV
KLVHRDQKSPANASRIKSLWNEMKIVRSFRADQHPSIIAFHSFVVSVKYAMITMTYLPTPMPVEVQEVKAREWFR
FLLSAVDFLHRRGVVHNDIKPANILLSHKNIPVLVDFGFAEKNDPEDETSFHSNLAYGTPEYLSPERARGLTHDT
RKSDVWSLGVTFFEILNGRTPFEEFDGESLSTKEAVERYWARTLRGKWVGTWDVSPGMEKLLRRMICPNADLRCT
AAHALADRYWSPGREESKNTHRRSASEISSIVFEKDLDKLLNMTPPRSRRTVDASENPVSPPGLALPQDLDSSTR
RHSLVKSKSQPKVTASNIQPRRRPAPPVIDLSPIKASPPASPYASASAKENMAAAANRNRSVAGHKENKHGTASS
RRAFGAIIAPDNNTIMPPPPLSTRIPIKTLDEMTSRRRSGLFDSTRSRSNLALSNKTSNINLKDGDRSLSGSLRA
NGSNNVKDRVLEWEREKQRLREMERLEELERERDEHFEREKARRKEKREKKEEENKEDTLAAPPVTHKRSKKASA
DAEGEKENMGASKPGQKQKSHASPPTLPLPPVMSPLSRMLNTFPAPTPNNTVIQSPPAPQPAKQSRQNIFKHSIK
ASIDKTVQFCKAPSIGRAAGSKTGGGSTSATPGRGFSFDIVREVEKAGAKIRRESRDEPRTSKHREEVSTPLSPN
IGSVVSPITPLGPIKNAAMMEQAAAETQMDRMAIWMKNVKEVVEETQANFEAMAPQEFSLPPLPVPLPRSQSRQN
RSSRLPRRVLAASQIFDENGQPSTADSSFTSNKASMTSSTQHCPPPPPSAYTGPGTPRRISGSSGPSQEISVHPH
ASGSPLVSAASSNFVIPEIVTPSKQKRRATVSTRSPEPLISAKFADNVDYSASTSNLNIAAYVAAKRNQSQSTLT
KLGITPLGLDPDHKKSSETLIKLSDVDRSLFVPSPFVSQDNLLDNSSFVFAREPSYDDLTGSPCHVEAYPSRNRP
SKDVSYMDTPNRLKMENVYDRFLMTSGVKRCGKGYQSESFGPTSNTLGPSTNKRESFRPFSSTRKPMPPPVSSED
IIEKMENKAVSVDELGMMTNVEGEAGTTPLHSVGSKDEGGGTVAMVRRAFKAMVPGKAVVSKRTSKVY
Length 1193

Coding

Sequence id CopciAB_448807.T0
Sequence >CopciAB_448807.T0
ATGGACTCGTCTTCGTCCTCACGCACAAATTCCCCAACGAGTCCTCTCGAACAAGAACCGAACGACGTGTTCTCG
ATAGACGATGACACCGTCTCTGCAGAGCTGGACTTTGTGGAAGAGATCGGCAACGGGAATTGGGGAAGCGTTTGG
CTGGTCAGGCCCAAACGTTCACGACCGCAATGCCATCATCCAGCTTTCAAAGTTGGTGGGCGCAAGTTTGCAGTC
AAGCTCGTGCACAGAGACCAAAAGTCCCCAGCCAATGCTTCACGTATCAAGTCCTTATGGAACGAGATGAAGATT
GTGCGGTCGTTCAGAGCAGACCAGCATCCTTCTATTATTGCATTTCATTCTTTTGTAGTGAGCGTCAAATACGCC
ATGATTACCATGACATATCTCCCAACGCCCATGCCTGTTGAAGTCCAGGAGGTTAAGGCACGGGAATGGTTCCGC
TTCCTCCTCTCCGCGGTTGACTTCCTACATCGACGCGGTGTGGTCCACAACGATATCAAACCGGCCAACATCCTC
CTTTCGCACAAGAACATCCCTGTCCTTGTCGACTTTGGGTTCGCAGAAAAGAATGACCCAGAGGATGAGACCTCG
TTCCATTCCAATCTCGCCTATGGAACTCCCGAGTACCTCTCGCCTGAGCGAGCAAGAGGCCTCACCCACGACACG
CGCAAGTCAGACGTGTGGTCTCTAGGCGTCACGTTCTTCGAAATTCTGAATGGTCGCACGCCGTTTGAAGAATTT
GACGGCGAATCGCTATCTACCAAAGAGGCCGTTGAGCGCTACTGGGCGAGGACTCTTCGGGGTAAATGGGTAGGC
ACATGGGATGTAAGTCCCGGCATGGAAAAACTGCTTCGCCGCATGATATGCCCCAATGCCGACTTGAGATGTACG
GCTGCTCATGCCCTCGCAGACCGGTATTGGTCTCCTGGACGAGAGGAGTCCAAAAACACCCATCGCCGCTCTGCG
AGTGAAATCTCATCTATTGTGTTCGAGAAAGACCTCGATAAGCTGCTCAACATGACCCCTCCTCGCAGTAGGCGA
ACCGTGGATGCGAGTGAGAACCCTGTCTCCCCTCCTGGTCTAGCGCTTCCACAAGACCTCGATTCATCCACCCGT
CGTCACTCTCTCGTCAAGTCCAAGTCTCAACCCAAAGTCACCGCTTCCAACATCCAACCTCGCAGGAGGCCGGCG
CCACCTGTCATCGACCTCTCGCCAATTAAGGCTTCACCACCTGCCTCGCCCTATGCGTCTGCTTCTGCTAAAGAG
AACATGGCGGCAGCTGCTAATCGCAATAGATCAGTGGCGGGTCACAAAGAGAACAAGCATGGTACTGCATCATCC
AGGAGGGCATTTGGTGCCATCATCGCTCCTGATAACAACACTATCATGCCGCCGCCTCCATTGTCAACGCGCATT
CCTATCAAGACACTAGACGAGATGACGAGTCGACGACGCTCCGGACTGTTCGACAGCACACGAAGCAGGAGTAAC
TTGGCACTGTCCAACAAGACCAGCAACATTAATTTGAAGGACGGAGATCGCTCGCTGTCAGGTAGCCTGAGGGCC
AACGGCTCGAATAATGTCAAGGATAGAGTACTGGAGTGGGAACGAGAGAAGCAGAGGCTAAGGGAAATGGAAAGA
TTGGAAGAGCTTGAAAGAGAGCGAGACGAACATTTCGAAAGGGAAAAGGCAAGGCGGAAGGAAAAGAGGGAGAAA
AAGGAGGAGGAGAACAAAGAGGACACACTAGCTGCTCCTCCCGTCACCCACAAGAGGTCCAAGAAAGCAAGCGCG
GACGCCGAAGGCGAGAAGGAGAACATGGGTGCTTCGAAGCCAGGTCAGAAGCAGAAATCGCATGCCAGTCCACCC
ACTCTACCGCTGCCCCCTGTTATGTCGCCGCTCAGCCGAATGTTGAACACTTTCCCTGCCCCGACCCCAAATAAC
ACTGTTATTCAATCACCTCCAGCGCCTCAACCTGCCAAGCAATCCAGGCAGAACATTTTCAAACACAGCATCAAG
GCCTCCATCGATAAAACGGTCCAGTTCTGCAAAGCCCCGTCAATTGGAAGGGCTGCAGGATCGAAAACAGGCGGA
GGATCTACATCAGCTACACCAGGACGAGGGTTCTCGTTTGACATTGTACGAGAAGTGGAGAAAGCAGGGGCGAAG
ATTCGCCGTGAGTCAAGAGATGAGCCTCGCACTTCAAAGCACAGGGAGGAAGTTTCTACACCACTTTCACCCAAC
ATTGGCTCCGTCGTTTCTCCTATCACGCCTCTAGGCCCTATCAAGAATGCTGCCATGATGGAACAGGCTGCGGCT
GAGACCCAGATGGACAGAATGGCAATTTGGATGAAGAATGTCAAAGAAGTAGTTGAAGAGACTCAGGCCAACTTC
GAAGCAATGGCGCCCCAAGAGTTCTCTCTACCGCCCCTTCCTGTTCCTTTGCCAAGGTCCCAGAGTCGACAGAAT
AGGTCCAGCCGCCTTCCCCGTCGTGTCCTTGCTGCAAGCCAGATCTTCGACGAGAACGGACAGCCATCCACCGCC
GACTCCAGCTTCACTTCCAACAAAGCAAGTATGACGTCCTCGACCCAGCATTGTCCACCGCCACCTCCGTCTGCC
TATACCGGCCCCGGCACTCCTCGACGCATTAGCGGGTCTTCCGGTCCAAGCCAGGAGATTTCCGTACATCCTCAT
GCTTCAGGTTCTCCCCTGGTCTCCGCTGCCAGTAGCAATTTCGTCATCCCAGAAATTGTGACACCCTCGAAGCAA
AAGAGAAGGGCGACTGTGTCCACTCGCTCCCCTGAGCCACTCATATCTGCCAAGTTCGCTGACAATGTGGACTAT
TCAGCCTCGACCTCCAACTTGAACATTGCTGCCTACGTTGCTGCGAAGCGAAACCAGAGCCAGTCGACCCTGACC
AAGCTGGGTATCACACCCCTCGGCCTTGACCCTGACCACAAGAAGAGTTCAGAAACTCTCATTAAACTATCCGAC
GTCGATCGCAGCCTCTTTGTCCCTTCACCCTTTGTCTCCCAGGACAACCTTCTTGACAACTCGAGCTTCGTCTTC
GCTCGTGAGCCATCATATGACGACCTTACCGGGTCTCCTTGCCACGTTGAGGCCTACCCATCGCGCAACCGCCCG
AGCAAAGACGTCTCTTACATGGACACCCCCAATCGACTCAAGATGGAGAACGTGTACGATCGCTTCCTCATGACC
TCCGGGGTGAAACGATGCGGGAAGGGGTACCAATCCGAGAGCTTTGGGCCAACCTCCAACACGCTCGGCCCCTCC
ACTAACAAACGTGAAAGCTTCCGACCCTTCTCGTCGACGCGCAAACCGATGCCTCCGCCAGTGTCCAGCGAAGAC
ATCATTGAGAAGATGGAGAACAAGGCCGTGTCGGTGGACGAGCTGGGGATGATGACGAATGTGGAGGGTGAGGCT
GGTACCACACCTTTGCATTCGGTCGGCTCGAAAGACGAAGGAGGCGGAACCGTAGCAATGGTTCGTCGTGCATTC
AAGGCCATGGTTCCTGGAAAGGCCGTTGTCTCCAAGCGAACGTCCAAAGTCTACTGA
Length 3582

Transcript

Sequence id CopciAB_448807.T0
Sequence >CopciAB_448807.T0
GGGCTCAAACAACGCGGTCGTCGTCGTTGCTTGCTGGTTCTTCGACACTGTACCCCCTGCTCGTCGTCCAGTCGG
ATAAGCTCCCTGTCGAACGCCCTTTCTAACGACCCAGCGCAGCCTACAACCTGAAAAACGACCGAACGAAACGAT
GGACTCGTCTTCGTCCTCACGCACAAATTCCCCAACGAGTCCTCTCGAACAAGAACCGAACGACGTGTTCTCGAT
AGACGATGACACCGTCTCTGCAGAGCTGGACTTTGTGGAAGAGATCGGCAACGGGAATTGGGGAAGCGTTTGGCT
GGTCAGGCCCAAACGTTCACGACCGCAATGCCATCATCCAGCTTTCAAAGTTGGTGGGCGCAAGTTTGCAGTCAA
GCTCGTGCACAGAGACCAAAAGTCCCCAGCCAATGCTTCACGTATCAAGTCCTTATGGAACGAGATGAAGATTGT
GCGGTCGTTCAGAGCAGACCAGCATCCTTCTATTATTGCATTTCATTCTTTTGTAGTGAGCGTCAAATACGCCAT
GATTACCATGACATATCTCCCAACGCCCATGCCTGTTGAAGTCCAGGAGGTTAAGGCACGGGAATGGTTCCGCTT
CCTCCTCTCCGCGGTTGACTTCCTACATCGACGCGGTGTGGTCCACAACGATATCAAACCGGCCAACATCCTCCT
TTCGCACAAGAACATCCCTGTCCTTGTCGACTTTGGGTTCGCAGAAAAGAATGACCCAGAGGATGAGACCTCGTT
CCATTCCAATCTCGCCTATGGAACTCCCGAGTACCTCTCGCCTGAGCGAGCAAGAGGCCTCACCCACGACACGCG
CAAGTCAGACGTGTGGTCTCTAGGCGTCACGTTCTTCGAAATTCTGAATGGTCGCACGCCGTTTGAAGAATTTGA
CGGCGAATCGCTATCTACCAAAGAGGCCGTTGAGCGCTACTGGGCGAGGACTCTTCGGGGTAAATGGGTAGGCAC
ATGGGATGTAAGTCCCGGCATGGAAAAACTGCTTCGCCGCATGATATGCCCCAATGCCGACTTGAGATGTACGGC
TGCTCATGCCCTCGCAGACCGGTATTGGTCTCCTGGACGAGAGGAGTCCAAAAACACCCATCGCCGCTCTGCGAG
TGAAATCTCATCTATTGTGTTCGAGAAAGACCTCGATAAGCTGCTCAACATGACCCCTCCTCGCAGTAGGCGAAC
CGTGGATGCGAGTGAGAACCCTGTCTCCCCTCCTGGTCTAGCGCTTCCACAAGACCTCGATTCATCCACCCGTCG
TCACTCTCTCGTCAAGTCCAAGTCTCAACCCAAAGTCACCGCTTCCAACATCCAACCTCGCAGGAGGCCGGCGCC
ACCTGTCATCGACCTCTCGCCAATTAAGGCTTCACCACCTGCCTCGCCCTATGCGTCTGCTTCTGCTAAAGAGAA
CATGGCGGCAGCTGCTAATCGCAATAGATCAGTGGCGGGTCACAAAGAGAACAAGCATGGTACTGCATCATCCAG
GAGGGCATTTGGTGCCATCATCGCTCCTGATAACAACACTATCATGCCGCCGCCTCCATTGTCAACGCGCATTCC
TATCAAGACACTAGACGAGATGACGAGTCGACGACGCTCCGGACTGTTCGACAGCACACGAAGCAGGAGTAACTT
GGCACTGTCCAACAAGACCAGCAACATTAATTTGAAGGACGGAGATCGCTCGCTGTCAGGTAGCCTGAGGGCCAA
CGGCTCGAATAATGTCAAGGATAGAGTACTGGAGTGGGAACGAGAGAAGCAGAGGCTAAGGGAAATGGAAAGATT
GGAAGAGCTTGAAAGAGAGCGAGACGAACATTTCGAAAGGGAAAAGGCAAGGCGGAAGGAAAAGAGGGAGAAAAA
GGAGGAGGAGAACAAAGAGGACACACTAGCTGCTCCTCCCGTCACCCACAAGAGGTCCAAGAAAGCAAGCGCGGA
CGCCGAAGGCGAGAAGGAGAACATGGGTGCTTCGAAGCCAGGTCAGAAGCAGAAATCGCATGCCAGTCCACCCAC
TCTACCGCTGCCCCCTGTTATGTCGCCGCTCAGCCGAATGTTGAACACTTTCCCTGCCCCGACCCCAAATAACAC
TGTTATTCAATCACCTCCAGCGCCTCAACCTGCCAAGCAATCCAGGCAGAACATTTTCAAACACAGCATCAAGGC
CTCCATCGATAAAACGGTCCAGTTCTGCAAAGCCCCGTCAATTGGAAGGGCTGCAGGATCGAAAACAGGCGGAGG
ATCTACATCAGCTACACCAGGACGAGGGTTCTCGTTTGACATTGTACGAGAAGTGGAGAAAGCAGGGGCGAAGAT
TCGCCGTGAGTCAAGAGATGAGCCTCGCACTTCAAAGCACAGGGAGGAAGTTTCTACACCACTTTCACCCAACAT
TGGCTCCGTCGTTTCTCCTATCACGCCTCTAGGCCCTATCAAGAATGCTGCCATGATGGAACAGGCTGCGGCTGA
GACCCAGATGGACAGAATGGCAATTTGGATGAAGAATGTCAAAGAAGTAGTTGAAGAGACTCAGGCCAACTTCGA
AGCAATGGCGCCCCAAGAGTTCTCTCTACCGCCCCTTCCTGTTCCTTTGCCAAGGTCCCAGAGTCGACAGAATAG
GTCCAGCCGCCTTCCCCGTCGTGTCCTTGCTGCAAGCCAGATCTTCGACGAGAACGGACAGCCATCCACCGCCGA
CTCCAGCTTCACTTCCAACAAAGCAAGTATGACGTCCTCGACCCAGCATTGTCCACCGCCACCTCCGTCTGCCTA
TACCGGCCCCGGCACTCCTCGACGCATTAGCGGGTCTTCCGGTCCAAGCCAGGAGATTTCCGTACATCCTCATGC
TTCAGGTTCTCCCCTGGTCTCCGCTGCCAGTAGCAATTTCGTCATCCCAGAAATTGTGACACCCTCGAAGCAAAA
GAGAAGGGCGACTGTGTCCACTCGCTCCCCTGAGCCACTCATATCTGCCAAGTTCGCTGACAATGTGGACTATTC
AGCCTCGACCTCCAACTTGAACATTGCTGCCTACGTTGCTGCGAAGCGAAACCAGAGCCAGTCGACCCTGACCAA
GCTGGGTATCACACCCCTCGGCCTTGACCCTGACCACAAGAAGAGTTCAGAAACTCTCATTAAACTATCCGACGT
CGATCGCAGCCTCTTTGTCCCTTCACCCTTTGTCTCCCAGGACAACCTTCTTGACAACTCGAGCTTCGTCTTCGC
TCGTGAGCCATCATATGACGACCTTACCGGGTCTCCTTGCCACGTTGAGGCCTACCCATCGCGCAACCGCCCGAG
CAAAGACGTCTCTTACATGGACACCCCCAATCGACTCAAGATGGAGAACGTGTACGATCGCTTCCTCATGACCTC
CGGGGTGAAACGATGCGGGAAGGGGTACCAATCCGAGAGCTTTGGGCCAACCTCCAACACGCTCGGCCCCTCCAC
TAACAAACGTGAAAGCTTCCGACCCTTCTCGTCGACGCGCAAACCGATGCCTCCGCCAGTGTCCAGCGAAGACAT
CATTGAGAAGATGGAGAACAAGGCCGTGTCGGTGGACGAGCTGGGGATGATGACGAATGTGGAGGGTGAGGCTGG
TACCACACCTTTGCATTCGGTCGGCTCGAAAGACGAAGGAGGCGGAACCGTAGCAATGGTTCGTCGTGCATTCAA
GGCCATGGTTCCTGGAAAGGCCGTTGTCTCCAAGCGAACGTCCAAAGTCTACTGACCCAACCGACCGGCCCAGTT
ACGCCAACTGATCTCTGTTTCACTCCCACTTGAATAACTTCCAGCTTTCGGTCGCACTCTTCATGCGCATAGCTG
TTACGTTCGTTCTGCTTCAACCTTGCATACTTTCTCGACCTTCATCATCCAACATTTCATACCCACATTAACAAC
CGCAATCTGCTCGCTGCGGATTTCTTTTGCTATCAATCGCTACATTGCTATCTTATTCCGCTCTCGAATTGCTTT
CGTACACAAAGTTCGTATTAGTCGTTATTGTGCTTTCCTATCTCAACGCCGCCCACTTTCCCCTATGCTTACCCT
TTTTTTATCCTTCACGCCGGTCACGTCTATCTTCCTACCCTTTCACGAATCCTCGGTTCTCCGACGACTTTGTTA
CGGTTACGCTCGACTCCTTTCTCCCTTGCTCTTTCTTGCTTTAAAATACTTTGTTACCTACGCCTCTTGATTCAT
GTTAACGTCTCGGCAGTTCATTCTTACGATGTCACGTATTTACGGCTAAATATATGAAGGATTTATGATTT
Length 4271

Gene

Sequence id CopciAB_448807.T0
Sequence >CopciAB_448807.T0
GGGCTCAAACAACGCGGTCGTCGTCGTTGCTTGCTGGTTCTTCGACACTGTACCCCCTGCTCGTCGTCCAGTCGG
ATAAGCTCCCTGTCGAACGCCCTTTCTAACGACCCAGCGCAGCCTACAACCTGAAAAACGACCGAACGAAACGAT
GGACTCGTCTTCGTCCTCACGCACAAATTCCCCAACGAGTCCTCTCGAACAAGAACCGAACGACGTGTTCTCGAT
AGACGATGACACCGTCTCTGCAGAGCTGGACTTTGTGGAAGAGGTGCGACCGGAATGCAACATACGATGGCCCAA
ATGATGACTCAACGCTCTCACAGATCGGCAACGGGAATTGGGGAAGCGTTTGGCTGGTCAGGCCCAAACGTTCAC
GACCGCAATGCCATCATCCAGCTTTCAAAGTTGGTGGGCGCAAGTTTGCAGTCAAGCTCGTGCACAGAGACCAAA
AGTCCCCAGCCAATGCTTCACGTATCAAGTCCTTGTGCGTCAAATGTCAAACAAGTGTTTTTTTCCCTTTCTTAC
CTTAACATCTTTTTAAGATGGAACGAGATGAAGATTGTGCGGTCGTTCAGAGCAGACCAGCATCCTTCTATTATT
GCATTTCATTCTTTTGTAGTGAGCGTCAAATACGCCATGATTACCATGTAAGCGAGTTGACATCCGGTATCTTCC
TCAAAACAAGACCTGACCTCCCTCTTAGGACATATCTCCCAACGCCCATGCCTGTTGAAGTCCAGGAGGTTAAGG
CACGGGAATGGTTCCGCTTCCTCCTCTCCGCGGTTGACTTCCTACATCGACGCGGTGTGGTCCACAACGATATCA
AGTACGTAAAGTGGTTCTTGTTATGGTCTCCTTGTACTCCGTCGAATACTTTACCTATCGATTACTGATGCATAC
TTGATAACTTGCTAACAGACCGGCCAACATCCTCCTTTCGCACAAGAACATCCCTGTCCTTGTCGACTTTGGGTT
CGCAGAAAAGAATGACCCAGAGGATGAGACCTCGTTCCATTCCAATCTCGCCTATGGAACTCCCGAGGTAGCGCA
TGATCTTCCTGCTACACCAACACACAGGCTCACCCAGTCACTGCAGTACCTCTCGCCTGAGCGAGCAAGAGGCCT
CACCCACGACACGCGCAAGTCAGACGTGTGGTCTCTAGGCGTCACGTTCTTCGAAATTCTGAATGGTCGCACGCC
GTTTGAAGAATTTGACGGCGAATCGCTATCTACCAAAGAGGCCGTTGAGCGCTACTGGGCGAGGACTGTGAGTAT
ATTACTGGTCCACTTTTCTGGCATAGTATCTAACGCCTTTTAGCTTCGGGGTAAATGGGTAGGCACATGGGATGT
AAGTCCCGGCATGGAAAAACTGCTTCGCCGCATGATATGCCCCAATGCCGACTTGAGATGTACGGCTGCTCATGC
CCTCGCAGACCGGTATTGGTCTCCTGGACGAGAGGAGTCCAAAAACACCCATCGTGAGTGCCAATCTTGTCCCAG
TGAATAGGTCGGCTCAAGAACCATTTTTTAGGCCGCTCTGCGAGTGAAATCTCATCTATTGTGTTCGAGAAAGAC
CTCGATAAGCTGCTCAACATGACCCCTCCTCGCAGTAGGCGAACCGTGGATGCGAGTGAGAACCCTGTCTCCCCT
CCTGGTCTAGCGCTTCCACAAGACCTCGATTCATCCACCCGTCGTCACTCTCTCGTCAAGTCCAAGTCTCAACCC
AAAGTCACCGCTTCCAACAGTATGTCTAACATCTGATCTGTCAACTCTTTGTATTGACACTAGTTTCAGTCCAAC
CTCGCAGGAGGCCGGCGCCACCTGTCATCGACCTCTCGCCAATTAAGGCTTCACCACCTGCCTCGCCCTATGCGT
CTGCTTCTGCTAAAGAGAACATGGCGGCAGCTGCTAATCGCAATAGATCAGTGGCGGGTCACAAAGAGAACAAGC
ATGGTACTGCATCATCCAGGAGGGCATTTGGTGCCATCATCGCTCCTGATAACAACACTATCATGCCGCCGCCTC
CATTGTCAACGCGCATTCCTATCAAGACACTAGACGAGATGACGAGTCGACGACGCTCCGGACTGTTCGACAGCA
CACGAAGCAGGAGTAACTTGGCACTGTCCAACAAGACCAGCAACATTAATTTGAAGGACGGAGATCGCTCGCTGT
CAGGTAGCCTGAGGGCCAACGGCTCGAATAATGTCAAGGATAGAGTACTGGAGTGGGAACGAGAGAAGCAGAGGC
TAAGGGAAATGGAAAGATTGGAAGAGCTTGAAAGAGAGCGAGACGAACATTTCGAAAGGGAAAAGGCAAGGCGGA
AGGAAAAGAGGGAGAAAAAGGAGGAGGAGAACAAAGAGGACACACTAGCTGCTCCTCCCGTCACCCACAAGAGGT
CCAAGAAAGCAAGCGCGGACGCCGAAGGCGAGAAGGAGAACATGGGTGCTTCGAAGCCAGGTCAGAAGCAGAAAT
CGCATGCCAGTCCACCCACTCTACCGCTGCCCCCTGTTATGTCGCCGCTCAGCCGAAGTGAGTTGTCCTTTACCA
CAAACACAGGCGACTTTATTGACGGTGTCTTTCCAGTGTTGAACACTTTCCCTGCCCCGACCCCAAATAACACTG
TTATTCAATCACCTCCAGCGCCTCAACCTGCCAAGCAATCCAGGCAGAACATTTTCAAACACAGCATCAAGGCCT
CCATCGGTGTGTGGCATATGATGATCAGCTTTACCTGGTGGCTCACTTTCGTATAGATAAAACGGTCCAGTTCTG
CAAAGCCCCGTCAATTGGAAGGGCTGCAGGATCGAAAACAGGCGGAGGATCTACATCAGCTACACCAGGACGAGG
GTTCTCGTTTGACATTGTACGAGAAGTGGAGAAAGCAGGGGCGAAGATTCGCCGTGAGTCAAGAGATGAGCCTCG
CACTTCAAAGCACAGGGAGGAAGGTAAGTATCTCGGTCTTCCCTGCTGACTGCATGGCACTATCTGCGTGTATCT
GGACGCTGATGATTCTGACACAGTTTCTACACCACTTTCACCCAACATTGGCTCCGTCGTTTCTCCTATCACGCC
TCTAGGCCCTATCAAGAATGCTGCCATGATGGAACAGGCTGCGGCTGAGACCCAGATGGACAGAATGGCAATTTG
GATGAAGAATGTCAAAGGTAGGTTTCAGGCTACCGTCTAGTGTTGACGGACAGTATCTGATCAGAGATTGCACCA
ATAGAAGTAGTTGAAGAGACTCAGGCCAACTTCGAAGCAATGGCGCCCCAAGAGTTCTCTCTACCGCCCCTTCCT
GTTCCTTTGCCAAGGTCCCAGAGTCGACAGAATAGGTCCAGCCGCCTTCCCCGTCGTGTCCTTGCTGCAAGCCAG
ATCTTCGACGAGAACGGACAGCCATCCACCGCCGACTCCAGCTTCACTTCCAACAAAGCAAGTATGACGTCCTCG
ACCCAGCATTGTCCACCGCCACCTCCGTCTGCCTATACCGGCCCCGGCACTCCTCGACGCATTAGCGGGTCTTCC
GGTCCAAGCCAGGAGATTTCCGTACATCCTCATGCTTCAGGTTCTCCCCTGGTCTCCGCTGCCAGTAGCAATTTC
GTCATCCCAGAAATTGTGACACCCTCGAAGCAAAAGAGAAGGGCGACTGTGTCCACTCGCTCCCCTGAGCCACTC
ATATCTGCCAAGTTCGCTGACAATGTGGACTATTCAGCCTCGACCTCCAACTTGAACATTGCTGCCTACGTTGCT
GCGAAGCGAAACCAGAGCCAGTCGACCCTGACCAAGCTGGGTATCACACCCCTCGGCCTTGACCCTGACCACAAG
AAGAGTACGTAACTTGTCCTTGGGCCATGTTCAGGACAGTGCTGATTGCGCCCTATCATTAGGTTCAGAAACTCT
CATTAAACTATCCGACGTCGATCGCAGCCTCTTTGTCCCTTCACCCTTTGTCTCCCAGGACAACCTTCTTGACAA
CTCGAGCTTCGTCTTCGCTCGTGAGCCATCATATGACGACCTTACCGGGTCTCCTTGCCACGTTGAGGCCTACCC
ATCGCGCAACCGCCCGAGCAAAGACGTCTCTTACATGGACACCCCCAATCGACTCAAGATGGAGAACGTGTACGA
TCGCTTCCTCATGACCTCCGGGGTGAAACGATGCGGGAAGGGGTACCAATCCGAGAGCTTTGGGCCAACCTCCAA
CACGCTCGGCCCCTCCACTAACAAACGTGAAAGCTTCCGACCCTTCTCGTCGACGCGCAAACCGATGCCTCCGCC
AGTGTCCAGCGAAGACATCATTGAGAAGATGGAGAACAAGGCCGTGTCGGTGGACGAGCTGGGGATGATGACGAA
TGTGGAGGGTGAGGCTGGTACCACACCTTTGCATTCGGTCGGCTCGAAAGACGAAGGAGGCGGAACCGTAGCAAT
GGTTCGTCGTGCATTCAAGGCCATGGTTCCTGGAAAGGCCGTTGTCTCCAAGCGAACGTCCAAAGTCTACTGACC
CAACCGACCGGCCCAGTTACGCCAACTGATCTCTGTTTCACTCCCACTTGAATAACTTCCAGCTTTCGGTCGCAC
TCTTCATGCGCATAGCTGTTACGTTCGTTCTGCTTCAACCTTGCATACTTTCTCGACCTTCATCATCCAACATTT
CATACCCACATTAACAACCGCAATCTGCTCGCTGCGGATTTCTTTTGCTATCAATCGCTACATTGCTATCTTATT
CCGCTCTCGAATTGCTTTCGTACACAAAGTTCGTATTAGTCGTTATTGTGCTTTCCTATCTCAACGCCGCCCACT
TTCCCCTATGCTTACCCTTTTTTTATCCTTCACGCCGGTCACGTCTATCTTCCTACCCTTTCACGAATCCTCGGT
TCTCCGACGACTTTGTTACGGTTACGCTCGACTCCTTTCTCCCTTGCTCTTTCTTGCTTTAAAATACTTTGTTAC
CTACGCCTCTTGATTCATGTTAACGTCTCGGCAGTTCATTCTTACGATGTCACGTATTTACGGCTAAATATATGA
AGGATTTATGATTT
Length 5039