Systematic name | CopciAB_460475 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | SSN3 | Synonyms | 460475 |
Uniprot id | Functional description | Serine/Threonine protein kinases, catalytic domain | |
Location | scaffold_5:441118..443083 | Strand | + |
Gene length (nt) | 1966 | Transcript length (nt) | 1552 |
CDS length (nt) | 1347 | Protein length (aa) | 448 |
Strain name | Gene / Protein name |
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Neurospora crassa | stk-8 |
Cryptococcus neoformans | SSN3 |
Saccharomyces cerevisiae | YPL042C_SSN3 |
Schizosaccharomyces pombe | srb10 |
Ustilago maydis | SSN3 |
Aspergillus nidulans | ssn3 |
Candida albicans | SSN3 |
Strain name | Gene / Protein name | Pident | E-value | Bits |
---|---|---|---|---|
Agrocybe aegerita | Agrae_CAA7259444 | 79.7 | 4.568E-234 | 720 |
Hypsizygus marmoreus strain 51987-8 | Hypma_RDB20045 | 79 | 5.627E-233 | 717 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_212134 | 74.6 | 5.545E-228 | 702 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_56945 | 74.6 | 5.779E-228 | 702 |
Pleurotus ostreatus PC15 | PleosPC15_2_1093132 | 75.6 | 1.571E-217 | 672 |
Pleurotus eryngii ATCC 90797 | Pleery1_1385059 | 75.1 | 2.02E-216 | 669 |
Flammulina velutipes | Flave_chr11AA01178 | 77.3 | 2.212E-214 | 663 |
Pleurotus ostreatus PC9 | PleosPC9_1_114610 | 75.5 | 1.544E-208 | 646 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_114554 | 71.1 | 2.632E-203 | 631 |
Schizophyllum commune H4-8 | Schco3_58330 | 82.1 | 1.462E-194 | 606 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_8367 | 70.8 | 3.097E-193 | 602 |
Lentinula edodes NBRC 111202 | Lenedo1_1054076 | 75.7 | 4.431E-189 | 590 |
Auricularia subglabra | Aurde3_1_1219939 | 74.7 | 4.588E-185 | 579 |
Lentinula edodes B17 | Lened_B_1_1_1408 | 55.3 | 3.049E-144 | 460 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | SSN3 |
---|---|
Protein id | CopciAB_460475.T0 |
Description | Serine/Threonine protein kinases, catalytic domain |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
---|---|---|---|---|---|
CDD | cd07842 | STKc_CDK8_like | - | 44 | 352 |
Pfam | PF00069 | Protein kinase domain | IPR000719 | 49 | 352 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
---|---|
IPR000719 | Protein kinase domain |
IPR008271 | Serine/threonine-protein kinase, active site |
IPR011009 | Protein kinase-like domain superfamily |
Go id | Term | Ontology |
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GO:0004672 | protein kinase activity | MF |
GO:0005524 | ATP binding | MF |
GO:0006468 | protein phosphorylation | BP |
KEGG Orthology |
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K02208 |
COG category | Description |
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K | Serine/Threonine protein kinases, catalytic domain |
Class | Family | Subfamily |
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No records |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_460475.
Sequence id | CopciAB_460475.T0 |
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Sequence |
>CopciAB_460475.T0 MQQQPQQQQQQVSLDEWVSNVMQHDPMRVYRARRDAHHRPVTSKYAILGFISSGTYGRVYKAQSINGGELLAIKK FKPDKEGDVVTYTGISQSAIREIALNREINHENVVALREVILEDKSIYMVFEYAEHDFLQVIHHYYQTIRTSIPT AVLKSLIYQLFNGLIYLHASHILHRDLKPANILITSQGVVKIGDLGLARLCYEPLQPLFAGDKVVVTIWYRAPEL LMGAKHYNKAIDCWAVGCVMAELASLRPIFKGEEAKLDSKKNVPFQRDQLIKIFEVLGTPDERDWPGVVDMPEYR NMKLLDHFSNRLSDWCHSRIRSPQGYDLLRQLFAYDPDNRLTADQAVQHKWFHEDPLPTWNAFQSLAQHQIPPCR RITQDEAPSMMPMATQQNTQQAMGGGHIAGAGAPFSKPGSTASFASLSGGGPYAQSQSGTGGHTHTRKKARMG |
Length | 448 |
Sequence id | CopciAB_460475.T0 |
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Sequence |
>CopciAB_460475.T0 ATGCAGCAACAACCACAACAGCAACAACAACAAGTATCATTGGACGAATGGGTTTCCAATGTCATGCAACATGAT CCCATGCGTGTCTACCGCGCTAGACGGGATGCGCACCATCGACCGGTTACCTCGAAATATGCGATCCTAGGCTTC ATTTCTTCTGGAACGTATGGACGCGTGTATAAAGCTCAGTCTATCAACGGAGGAGAGCTTCTGGCGATTAAAAAG TTCAAACCAGACAAAGAGGGCGATGTGGTCACCTACACTGGAATCAGCCAGAGTGCAATTCGTGAAATCGCGCTG AATAGAGAAATAAACCACGAGAATGTAGTGGCCCTCCGAGAAGTAATCCTCGAGGATAAATCCATCTACATGGTC TTCGAATACGCAGAACACGACTTTCTCCAAGTAATACACCACTACTACCAAACCATCCGCACCTCAATACCAACC GCAGTCCTCAAATCCCTAATCTACCAACTCTTCAACGGGCTCATCTACCTCCACGCCTCCCACATCCTCCACCGC GACCTCAAACCAGCAAACATCCTCATCACCTCCCAAGGCGTCGTCAAAATCGGCGACCTGGGTCTCGCACGTCTG TGTTACGAGCCTCTCCAACCGCTCTTCGCCGGCGACAAGGTCGTCGTAACGATCTGGTACCGCGCACCGGAACTC TTGATGGGCGCGAAGCACTACAATAAAGCGATAGATTGCTGGGCTGTGGGGTGTGTTATGGCTGAGTTGGCGAGC CTGAGGCCGATTTTTAAAGGTGAAGAGGCGAAGCTGGACTCGAAGAAGAATGTACCGTTTCAGAGGGACCAGTTG ATCAAGATTTTCGAGGTGCTGGGAACGCCGGATGAACGAGACTGGCCAGGTGTAGTCGACATGCCTGAATATCGA AATATGAAACTCCTGGACCACTTCTCAAACCGCCTATCAGATTGGTGCCACTCCCGTATACGGTCACCTCAAGGC TACGACCTCCTCCGCCAGCTCTTCGCCTACGATCCCGATAACAGACTAACAGCAGACCAGGCTGTTCAGCATAAA TGGTTTCACGAGGATCCTTTGCCTACCTGGAACGCCTTCCAATCCCTCGCACAACACCAAATCCCGCCATGCCGA CGTATAACCCAAGACGAGGCGCCATCCATGATGCCCATGGCCACCCAGCAAAACACGCAACAAGCAATGGGGGGA GGACACATTGCAGGAGCAGGCGCGCCATTCTCCAAACCGGGTAGTACAGCCAGTTTTGCAAGCCTGAGCGGTGGT GGGCCGTACGCCCAGAGTCAGAGTGGGACCGGAGGTCACACGCATACGAGGAAGAAGGCTAGAATGGGGTAG |
Length | 1347 |
Sequence id | CopciAB_460475.T0 |
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Sequence |
>CopciAB_460475.T0 ATCTTCCTCCCACCGTCAACAACGACGATGAGCATCCTCATCGTCGCCTTCCATGCAGCAACAACCACAACAGCA ACAACAACAAGTATCATTGGACGAATGGGTTTCCAATGTCATGCAACATGATCCCATGCGTGTCTACCGCGCTAG ACGGGATGCGCACCATCGACCGGTTACCTCGAAATATGCGATCCTAGGCTTCATTTCTTCTGGAACGTATGGACG CGTGTATAAAGCTCAGTCTATCAACGGAGGAGAGCTTCTGGCGATTAAAAAGTTCAAACCAGACAAAGAGGGCGA TGTGGTCACCTACACTGGAATCAGCCAGAGTGCAATTCGTGAAATCGCGCTGAATAGAGAAATAAACCACGAGAA TGTAGTGGCCCTCCGAGAAGTAATCCTCGAGGATAAATCCATCTACATGGTCTTCGAATACGCAGAACACGACTT TCTCCAAGTAATACACCACTACTACCAAACCATCCGCACCTCAATACCAACCGCAGTCCTCAAATCCCTAATCTA CCAACTCTTCAACGGGCTCATCTACCTCCACGCCTCCCACATCCTCCACCGCGACCTCAAACCAGCAAACATCCT CATCACCTCCCAAGGCGTCGTCAAAATCGGCGACCTGGGTCTCGCACGTCTGTGTTACGAGCCTCTCCAACCGCT CTTCGCCGGCGACAAGGTCGTCGTAACGATCTGGTACCGCGCACCGGAACTCTTGATGGGCGCGAAGCACTACAA TAAAGCGATAGATTGCTGGGCTGTGGGGTGTGTTATGGCTGAGTTGGCGAGCCTGAGGCCGATTTTTAAAGGTGA AGAGGCGAAGCTGGACTCGAAGAAGAATGTACCGTTTCAGAGGGACCAGTTGATCAAGATTTTCGAGGTGCTGGG AACGCCGGATGAACGAGACTGGCCAGGTGTAGTCGACATGCCTGAATATCGAAATATGAAACTCCTGGACCACTT CTCAAACCGCCTATCAGATTGGTGCCACTCCCGTATACGGTCACCTCAAGGCTACGACCTCCTCCGCCAGCTCTT CGCCTACGATCCCGATAACAGACTAACAGCAGACCAGGCTGTTCAGCATAAATGGTTTCACGAGGATCCTTTGCC TACCTGGAACGCCTTCCAATCCCTCGCACAACACCAAATCCCGCCATGCCGACGTATAACCCAAGACGAGGCGCC ATCCATGATGCCCATGGCCACCCAGCAAAACACGCAACAAGCAATGGGGGGAGGACACATTGCAGGAGCAGGCGC GCCATTCTCCAAACCGGGTAGTACAGCCAGTTTTGCAAGCCTGAGCGGTGGTGGGCCGTACGCCCAGAGTCAGAG TGGGACCGGAGGTCACACGCATACGAGGAAGAAGGCTAGAATGGGGTAGAATGAAAGTTGAATTTACAGACTTAT GGCCCTTAGGTGCTACACACTAGGACTACTACAAACAAGGGCTACAGCAATACATCAGAACCACCTCCACTACCA CCCATGTACATCGCATAGAAAGGCGGCTGGTTAATCCTAAACTCAAACCTCC |
Length | 1552 |
Sequence id | CopciAB_460475.T0 |
---|---|
Sequence |
>CopciAB_460475.T0 ATCTTCCTCCCACCGTCAACAACGACGATGAGCATCCTCATCGTCGCCTTCCATGCAGCAACAACCACAACAGCA ACAACAACAAGTATCATTGGACGAATGGGTTTCCAATGTCATGCAACATGATCCCATGCGTGTCTACCGCGCTAG ACGGGATGCGCACCATCGACCGGTTACCTCGAAATATGCGATCCTAGGCTTCATTTCTTCTGGAACGTATGGACG CGTGTATAAAGCTCAGTCTATCAACGGAGGAGAGCTTCTGGCGATTAAAAAGTTCAAACCAGACAAAGAGGGCGA TGTGGTCACCTACACTGGAATCAGCCAGAGTGCAATTCGTGAAATCGCGGTGCGTTTTTTCTCGCACTCTTCTTT GAGAGCTTTGAATTGACTATTATCTAGCTGAATAGAGAAATAAACCACGAGAATGTAGTGGCCCTCCGAGAAGTA ATCCTCGAGGATAAATCCATCTACATGGTCTTCGAATACGCAGAACACGACTTTCTCGTTCGTCCCTCTTGTCCT TCTTCCAATCACAACTCTAACCGACTCTGATTACAGCAAGTAATACACCACTACTACCAAACCATCCGCACCTCA ATACCAACCGCAGTCCTCAAATCCCTAATCTACCAACTCTTCAACGGGCTCATCTACCTCCACGCCTCCCACATC CTCCACCGCGACCTCAAACCAGCAAACATCCTCATCACCTCCCAAGGCGTCGTCAAAATCGGCGACCTGGGTCTC GCACGTCTGTGTTACGAGCCTCTCCAACCGCTCTTCGCCGGCGACAAGGTCGTCGTAACGATCTGGTACCGCGCA CCGGAACTCTTGATGGGCGCGAAGCACTACAATAAAGCGATAGATTGCTGGGCTGTGGGGTGTGTTATGGCTGAG TTGGCGAGCCTGAGGCCGATTTTTAAAGGTGAAGAGGCGAAGCTGGACTCGAAGAAGAATGTACCGTTTCAGAGG GACCAGTTGATCAAGATTTTCGAGGTGCTGGGAACGCCGGATGGTGCGTCGATCGCTTTCTCTCCTCCCCTCCTC TCTGACAGGCGTTTCTTTTACTCTCAGAACGAGACTGGCCAGGTGTAGTCGACATGCCTGAATATCGAAATATGA AACTCCTGGACCAGTGAGCTCACGACCCCCCTCCCCTCCTTAAACCCCATTCTGACTTTCACAAACCAGCTTCTC AAACCGCCTATCAGATTGGTGCCACTCCCGTATACGGTCACCTCAAGGCTACGACCTCCTCCGCCAGCTCTTCGC CTACGATCCCGATAACAGACTAACAGCAGACCAGGCTGTTCAGCATAAATGGTTTCACGAGGATCCTTTGCCTAC CTGGAAGTACGTCTCTCAACCCCGTATCTAAGTTGTTTCGTTCTACGACATTGCTCATCCTCTTTCTCCGATAGC GCCTTCCAATCCCTCGCACAACACCAAATCCCGCCATGCCGACGTATAACCCAAGACGAGGCGCCATCCATGATG CCCATGGCCACCCAGCAAAACACGCAACAAGCAATGGGGGGAGGACACATTGCAGGTATGCACTCCTAATCGCGT ATGGACTACGGGCGAGGACCTAGCTATGAAAACGTCTTTCCCCATTGCACAGGAGCAGGCGCGCCATTCTCCAAA CCGGGTAGTACAGCCAGTTTTGCAAGCCTGAGCGGTGGTGGGCCGTACGCCCAGAGTCAGAGTGGGACCGGAGGT CACACGCATACGAGGAAGAAGGCTAGAATGGGGTAGAATGAAAGTTGAATTTACAGTAAGGTCTTGCATAATCTT CCAATAGTCGCCAATTACTAACTACGCACCAGGACTTATGGCCCTTAGGTGCTACACACTAGGACTACTACAAAC AAGGGCTACAGCAATACATCAGAACCACCTCCACTACCACCCATGTACATCGCATAGAAAGGCGGCTGGTTAATC CTAAACTCAAACCTCC |
Length | 1966 |