Systematic name | CopciAB_469725 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | BUB1 | Synonyms | 469725 |
Uniprot id | Functional description | Mad3/BUB1 hoMad3/BUB1 homology region 1 | |
Location | scaffold_8:642875..644527 | Strand | + |
Gene length (nt) | 1653 | Transcript length (nt) | 1532 |
CDS length (nt) | 1407 | Protein length (aa) | 468 |
Strain name | Gene / Protein name |
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Schizosaccharomyces pombe | mad3 |
Strain name | Gene / Protein name | Pident | E-value | Bits |
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Agrocybe aegerita | Agrae_CAA7267225 | 62.6 | 9.095E-182 | 570 |
Hypsizygus marmoreus strain 51987-8 | Hypma_RDB29894 | 59.6 | 8.145E-166 | 524 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_152609 | 59.1 | 6.062E-164 | 518 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_122130 | 58.7 | 3.372E-162 | 513 |
Lentinula edodes NBRC 111202 | Lenedo1_1090107 | 57.6 | 3.539E-155 | 493 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_9089 | 57.5 | 3.511E-155 | 493 |
Pleurotus eryngii ATCC 90797 | Pleery1_1440200 | 54.2 | 1.099E-150 | 480 |
Pleurotus ostreatus PC15 | PleosPC15_2_1074434 | 54 | 2.068E-150 | 479 |
Pleurotus ostreatus PC9 | PleosPC9_1_100738 | 54 | 2.024E-150 | 479 |
Flammulina velutipes | Flave_chr10AA01105 | 54.9 | 1.111E-139 | 448 |
Schizophyllum commune H4-8 | Schco3_2636410 | 51.2 | 1.077E-132 | 428 |
Lentinula edodes B17 | Lened_B_1_1_9515 | 50.7 | 1.296E-125 | 407 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_75678 | 44 | 2.757E-117 | 383 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | BUB1 |
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Protein id | CopciAB_469725.T0 |
Description | Mad3/BUB1 hoMad3/BUB1 homology region 1 |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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Pfam | PF08311 | Mad3/BUB1 homology region 1 | IPR013212 | 63 | 185 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR015661 | Mitotic spindle checkpoint protein Bub1/Mad3 |
IPR013212 | Mad3/Bub1 homology region 1 |
Go id | Term | Ontology |
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GO:0007094 | mitotic spindle assembly checkpoint | BP |
KEGG Orthology |
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K02178 |
K06680 |
COG category | Description |
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D | Mad3/BUB1 hoMad3/BUB1 homology region 1 |
Class | Family | Subfamily |
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No records |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_469725.
Sequence id | CopciAB_469725.T0 |
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Sequence |
>CopciAB_469725.T0 MISADDVFQESEPVVVDCDLLEAAKENVQPLATGRRVTALSTVLATPAAQRDAKLSATRNRLRINVELALEDEDG DPLDAYCRLVYWTMENYPQGHSAESGLLELLEEATRVLKDHNGGVYRGDMKYLKLWLIYASYVERPTIIYRFLLA NDIGIGFALLYEEHAAVLERDGRKQEADEIYALGIARKAEPLDHLESRYQDFQKRMISTFTAPAPEPARATQAAQ PKRQALATTSKIPTSTSRTGGTRIASSSRNTTVAAPTNMPPPSNRGGFQIFVDPSGQNGEAGEGGENGWHDLGTR KTRVKENVPETKKLVGTTIKQAGKTRRVVSASAASGSGSGSSGSSGSKFAIFRDPVDAPTPTPPAPAAASSSRKP SSSGKATKAFVPFVDEADVKKPSPTPPETPRAATPKFTPFRDEGDAESSRATAVPVGDAVIKVKKTGPKAPVPTS EAEALRKDPLKNYSTNDT |
Length | 468 |
Sequence id | CopciAB_469725.T0 |
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Sequence |
>CopciAB_469725.T0 ATGATATCCGCAGACGACGTTTTCCAAGAATCTGAGCCCGTCGTCGTCGACTGCGACCTTCTCGAGGCTGCCAAA GAGAATGTTCAGCCCCTCGCCACCGGTCGACGTGTGACGGCTCTTTCCACTGTTCTGGCGACCCCCGCCGCACAA CGCGATGCTAAATTGTCGGCGACACGAAATAGACTTCGAATCAACGTCGAGCTAGCACTGGAAGATGAAGACGGT GATCCATTGGACGCTTACTGTCGTCTCGTGTACTGGACCATGGAGAACTACCCTCAAGGTCACAGCGCAGAGTCG GGGCTGTTGGAACTGTTGGAAGAAGCCACTCGCGTTCTCAAAGACCACAACGGCGGGGTGTACCGTGGAGACATG AAGTACCTCAAGTTATGGCTGATATACGCCAGCTACGTGGAACGGCCCACCATCATTTATCGGTTCCTGCTCGCC AATGATATCGGAATCGGGTTCGCGCTACTGTACGAAGAGCACGCAGCTGTTCTAGAAAGGGATGGCCGGAAACAA GAGGCAGATGAGATTTATGCTTTGGGTATCGCTCGTAAAGCAGAACCCCTCGATCACCTAGAAAGCCGGTATCAA GATTTCCAGAAGAGGATGATCTCGACCTTTACGGCGCCTGCCCCTGAACCCGCGAGGGCGACCCAAGCTGCTCAG CCTAAACGTCAGGCGCTCGCTACGACGTCGAAGATCCCCACCTCGACATCGAGAACCGGCGGCACGCGAATCGCG TCATCGAGCCGAAATACGACGGTAGCTGCTCCCACCAATATGCCACCACCCTCGAATCGTGGGGGATTCCAAATC TTTGTGGATCCTTCTGGTCAGAATGGAGAAGCGGGTGAAGGAGGGGAGAATGGGTGGCACGATCTCGGAACACGT AAGACGAGGGTGAAGGAGAATGTTCCGGAGACGAAGAAACTCGTTGGGACGACCATCAAGCAGGCTGGGAAGACG AGGAGGGTGGTATCGGCTTCGGCTGCTTCTGGTTCTGGGTCCGGCTCCTCGGGAAGCTCAGGCTCCAAGTTTGCG ATATTCAGGGACCCAGTGGATGCCCCAACCCCAACCCCACCAGCGCCTGCTGCGGCTTCATCCTCGAGAAAGCCG TCGTCTAGCGGGAAGGCTACCAAGGCATTTGTGCCTTTTGTTGATGAGGCTGATGTGAAAAAGCCATCTCCTACA CCACCGGAGACTCCTCGTGCTGCGACGCCTAAGTTCACTCCCTTCCGTGACGAGGGTGATGCTGAGTCATCGCGG GCGACTGCAGTCCCAGTGGGCGATGCAGTGATCAAGGTCAAGAAGACAGGGCCCAAGGCTCCGGTGCCAACTTCT GAAGCAGAGGCGCTCAGAAAAGATCCTCTGAAAAACTATTCGACGAATGATACGTGA |
Length | 1407 |
Sequence id | CopciAB_469725.T0 |
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Sequence |
>CopciAB_469725.T0 GAACAACTTTAGTCTTTGACCTCGACGACCATGATATCCGCAGACGACGTTTTCCAAGAATCTGAGCCCGTCGTC GTCGACTGCGACCTTCTCGAGGCTGCCAAAGAGAATGTTCAGCCCCTCGCCACCGGTCGACGTGTGACGGCTCTT TCCACTGTTCTGGCGACCCCCGCCGCACAACGCGATGCTAAATTGTCGGCGACACGAAATAGACTTCGAATCAAC GTCGAGCTAGCACTGGAAGATGAAGACGGTGATCCATTGGACGCTTACTGTCGTCTCGTGTACTGGACCATGGAG AACTACCCTCAAGGTCACAGCGCAGAGTCGGGGCTGTTGGAACTGTTGGAAGAAGCCACTCGCGTTCTCAAAGAC CACAACGGCGGGGTGTACCGTGGAGACATGAAGTACCTCAAGTTATGGCTGATATACGCCAGCTACGTGGAACGG CCCACCATCATTTATCGGTTCCTGCTCGCCAATGATATCGGAATCGGGTTCGCGCTACTGTACGAAGAGCACGCA GCTGTTCTAGAAAGGGATGGCCGGAAACAAGAGGCAGATGAGATTTATGCTTTGGGTATCGCTCGTAAAGCAGAA CCCCTCGATCACCTAGAAAGCCGGTATCAAGATTTCCAGAAGAGGATGATCTCGACCTTTACGGCGCCTGCCCCT GAACCCGCGAGGGCGACCCAAGCTGCTCAGCCTAAACGTCAGGCGCTCGCTACGACGTCGAAGATCCCCACCTCG ACATCGAGAACCGGCGGCACGCGAATCGCGTCATCGAGCCGAAATACGACGGTAGCTGCTCCCACCAATATGCCA CCACCCTCGAATCGTGGGGGATTCCAAATCTTTGTGGATCCTTCTGGTCAGAATGGAGAAGCGGGTGAAGGAGGG GAGAATGGGTGGCACGATCTCGGAACACGTAAGACGAGGGTGAAGGAGAATGTTCCGGAGACGAAGAAACTCGTT GGGACGACCATCAAGCAGGCTGGGAAGACGAGGAGGGTGGTATCGGCTTCGGCTGCTTCTGGTTCTGGGTCCGGC TCCTCGGGAAGCTCAGGCTCCAAGTTTGCGATATTCAGGGACCCAGTGGATGCCCCAACCCCAACCCCACCAGCG CCTGCTGCGGCTTCATCCTCGAGAAAGCCGTCGTCTAGCGGGAAGGCTACCAAGGCATTTGTGCCTTTTGTTGAT GAGGCTGATGTGAAAAAGCCATCTCCTACACCACCGGAGACTCCTCGTGCTGCGACGCCTAAGTTCACTCCCTTC CGTGACGAGGGTGATGCTGAGTCATCGCGGGCGACTGCAGTCCCAGTGGGCGATGCAGTGATCAAGGTCAAGAAG ACAGGGCCCAAGGCTCCGGTGCCAACTTCTGAAGCAGAGGCGCTCAGAAAAGATCCTCTGAAAAACTATTCGACG AATGATACGTGAACTCGCCTATACCTATTCTTGCACATATGTCCTTTCCTTTTTTGCACGGTGTATTGTCATTTA CTCATTGCTTGAATTCCATTGTATTTGCTGCA |
Length | 1532 |
Sequence id | CopciAB_469725.T0 |
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Sequence |
>CopciAB_469725.T0 GAACAACTTTAGTCTTTGACCTCGACGACCATGATATCCGCAGACGACGTTTTCCAAGAATCTGAGCCCGTCGTC GTCGACTGCGACCTTCTCGAGGCTGCCAAAGAGAATGTTCAGCCCCTCGCCACCGGTCGACGTGTGACGGCTCTT TCCACTGTTCTGGCGACCCCCGCCGCACAACGCGATGCTAAATTGTCGGCGACACGAAATAGACTTCGAATCAAC GTCGAGCTAGCACTGGAAGATGAAGACGGTGATCCATTGGACGCTTACTGTCGTCTCGTGTACTGGACCATGGAG AACTACCCTCAAGGTCACAGCGCAGAGTCGGGGCTGTTGGAACTGTTGGAAGAAGCCACTCGCGTTCTCAAAGAC CACAACGGCGGGGTGTACCGTGGAGACATGAAGTACCTCAAGTTATGGCTGATATACGCCAGCTACGTGGAACGG CCCACCATCATTTATCGGTTCCTGCTCGCCAATGATATCGGAATCGGGTTCGCGCTACTGTACGAAGAGCACGCA GCTGTTCTAGAAAGGGATGGCCGGTGAGTACGAATGTATACCTCTATCCCATGGTTACGCTTTGAGCTCAATCAT TGCGAGAACTCAGGAAACAAGAGGCAGATGAGATTTATGCTTTGGGTATCGCTCGTAAAGCAGAACCCCTCGATC ACCTAGAAAGCCGGTATCAAGATTTCCAGAAGAGGATGATCTCGACCTTTACGGCGCCTGCCCCTGAACCCGCGA GGGCGACCCAAGCTGCTCAGCCTAAACGTCAGGCGCTCGCTACGACGTCGAAGATCCCCACCTCGACATCGAGAA CCGGCGGCACGCGAATCGCGTCATCGAGCCGAAATACGACGGTAGCTGCTCCCACCAATATGCCACCACCCTCGA ATCGTGGGGGATTCCAAATCTTTGTGGATCCTTCTGGTCAGAATGGAGAAGCGGGTGAAGGAGGGGAGAATGGGT GGCACGATCTCGGAACACGTAAGACGAGGGTGAAGGAGAATGTTCCGGAGACGAAGAAACTCGTTGGGACGACCA TCAAGCAGGCTGGGAAGACGAGGAGGGTGGTATCGGCTTCGGCTGCTTCTGGTTCTGGGTCCGGCTCCTCGGGAA GCTCAGGCTCCAAGTTTGCGATATTCAGGGACCCAGTGGATGCCCCAACCCCAACCCCACCAGCGCCTGCTGCGG CTTCATCCTCGAGAAAGCCGTCGTCTAGCGGGAAGGCTACCAAGGCATTTGTGCCTTTTGTTGATGAGGCTGATG TGAAAAAGCCATCTCCTACACCACCGGAGACTCCTCGTGCTGCGACGCCTAAGTTCACTCCCTTCCGTGACGAGG TAAGCTCTCCATAACTCTCCTTCATCGATAACCTGACTGATCGCCTTATCCTTAGGGTGATGCTGAGTCATCGCG GGCGACTGCAGTCCCAGTGGGCGATGCAGTGATCAAGGTCAAGAAGACAGGGCCCAAGGCTCCGGTGCCAACTTC TGAAGCAGAGGCGCTCAGAAAAGATCCTCTGAAAAACTATTCGACGAATGATACGTGAACTCGCCTATACCTATT CTTGCACATATGTCCTTTCCTTTTTTGCACGGTGTATTGTCATTTACTCATTGCTTGAATTCCATTGTATTTGCT GCA |
Length | 1653 |