Systematic name | CopciAB_488576 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 488576 |
Uniprot id | Functional description | Aryl-alcohol oxidase | |
Location | scaffold_10:226573..228886 | Strand | + |
Gene length (nt) | 2314 | Transcript length (nt) | 1944 |
CDS length (nt) | 1752 | Protein length (aa) | 583 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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0 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_488576.T0 |
Description | Aryl-alcohol oxidase |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 34 | 344 |
Pfam | PF05199 | GMC oxidoreductase | IPR007867 | 432 | 570 |
Prediction | Start | End | Score |
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SP(Sec/SPI) | 1 | 19 | 0.9971 |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
IPR012132 | Glucose-methanol-choline oxidoreductase |
IPR036188 | FAD/NAD(P)-binding domain superfamily |
IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal |
Go id | Term | Ontology |
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GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
GO:0050660 | flavin adenine dinucleotide binding | MF |
KEGG Orthology |
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K00108 |
K20154 |
COG category | Description |
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E | Aryl-alcohol oxidase |
Class | Family | Subfamily |
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AA | AA3 | AA3_2 |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_488576.
Sequence id | CopciAB_488576.T0 |
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Sequence |
>CopciAB_488576.T0 MKLLALSALISLAVHLVEGRVIHDASELPARADYDFIVVGGGTAGSVLASRLSEDRRRSVLLIEAGPDNEGVEEL VIPASWMGGIPATYNWNYTTTPQPGFLDRVQPYDRGHVLGGSSALNAMVYTRGASEDYDEWARLTGDSGWRWNNL FPLIKRHEKWVPPAGGRDVSGQYDPNAHGYDGNTQVSLPWSGPNAFDAKAIAAAESSSEHSFNLDGNSGSPLGLT WIQSTIGNGERSSAATAYLSQSVRDRPNLTILTNTYTTRVLPTGLSILKDFRTVEFASRNGGPLRKLTAKKEVIL SAGAFGSPQILQNSGIGDRRDLSRVGVRTVHDLPDVGKGLSDHVTSTALWFTTDTSAPPMDPADAMAMWQNNRTG PLTEAVGHQILWARIPESSGIFANHPDPAPSPNTPHLEVALTTYGEVAGAFIVLMTPHSRGTVKIASNNPFDAPI IDPGWLSHEWDVQALTEGIRLVKRFYNEPAWDGYFTAPLTPDPDLTPIAEFHQHIRNTSGATSHASGTAAMSARG ARNGVVDPDLKVKGLRGLRVVDASVFPIIPSATTQGPVYFVAERAADLIKRSWMFWPF |
Length | 583 |
Sequence id | CopciAB_488576.T0 |
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Sequence |
>CopciAB_488576.T0 ATGAAGCTCCTAGCCCTCTCAGCTCTCATTTCCCTTGCCGTTCACCTCGTCGAAGGTCGCGTTATCCACGACGCC AGCGAGCTTCCAGCTAGGGCCGATTACGACTTCATCGTCGTTGGAGGTGGAACTGCAGGTTCTGTTCTTGCGAGT CGACTTTCGGAGGACCGCAGACGCAGCGTCTTGCTCATTGAAGCTGGCCCTGACAATGAGGGCGTTGAGGAGCTT GTAATTCCCGCTAGCTGGATGGGAGGTATTCCAGCGACATACAACTGGAACTATACCACCACCCCTCAGCCCGGG TTCCTCGATCGAGTCCAACCCTACGATCGAGGCCACGTTCTCGGTGGCAGCAGCGCTCTCAACGCAATGGTTTAC ACTCGAGGAGCGTCGGAAGACTATGATGAGTGGGCCAGGCTCACTGGCGACTCCGGCTGGAGGTGGAACAATCTC TTCCCCCTCATCAAGCGCCATGAGAAATGGGTCCCACCCGCTGGAGGTCGCGATGTCTCTGGTCAATATGACCCC AATGCTCACGGTTACGACGGAAACACCCAAGTTTCGCTGCCATGGAGTGGACCGAACGCATTCGACGCCAAGGCA ATCGCCGCCGCCGAGAGCTCTTCCGAGCACTCTTTCAATCTGGATGGGAACTCTGGATCCCCTCTGGGACTCACA TGGATTCAGTCCACCATAGGCAACGGAGAGCGCAGCAGCGCGGCAACTGCCTACCTCAGCCAATCTGTTCGTGAC AGACCCAATTTGACTATCCTCACGAACACGTATACCACCCGTGTTCTCCCAACTGGATTGAGCATACTCAAGGAC TTCCGCACGGTCGAATTCGCATCGAGAAATGGAGGTCCACTAAGGAAACTCACCGCCAAAAAGGAAGTTATCCTT TCGGCGGGTGCCTTTGGCTCGCCGCAGATCCTCCAGAACTCCGGTATTGGTGATCGACGAGACCTTTCTCGAGTC GGCGTCAGGACTGTCCACGACCTCCCCGACGTTGGAAAGGGACTTTCTGATCACGTTACTTCCACCGCCCTCTGG TTCACCACCGACACCTCAGCTCCACCGATGGATCCCGCCGATGCGATGGCTATGTGGCAGAACAACCGCACCGGA CCCCTCACCGAGGCTGTTGGTCACCAAATTCTGTGGGCAAGAATCCCAGAGAGCTCTGGCATCTTTGCCAACCAC CCTGACCCTGCTCCGAGCCCTAACACTCCTCACCTCGAGGTCGCACTCACCACCTACGGCGAAGTTGCTGGCGCT TTCATTGTTTTGATGACTCCTCATTCGCGCGGAACTGTCAAGATCGCCTCCAATAACCCATTCGATGCCCCCATC ATCGATCCTGGTTGGCTCTCGCACGAATGGGACGTCCAGGCTCTCACTGAGGGCATCCGTCTCGTCAAGAGATTC TATAACGAGCCTGCTTGGGATGGCTACTTCACTGCTCCCCTCACCCCGGACCCAGACCTCACTCCCATCGCCGAA TTCCACCAGCACATCAGGAACACCTCTGGCGCAACTTCGCATGCCTCAGGAACAGCAGCCATGTCGGCTAGGGGT GCGAGGAATGGCGTCGTTGACCCAGATTTGAAGGTGAAGGGCCTCAGGGGCCTCCGCGTCGTCGACGCATCTGTT TTCCCCATCATTCCTAGCGCGACCACGCAAGGTCCCGTCTACTTCGTCGCCGAGAGGGCCGCTGATTTGATCAAG AGGTCATGGATGTTCTGGCCTTTCTAA |
Length | 1752 |
Sequence id | CopciAB_488576.T0 |
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Sequence |
>CopciAB_488576.T0 AGCAACGAGCTTCCCCCAACTCCAACTGTTCTACTGTCTTTCTCTAAATTATGAAGCTCCTAGCCCTCTCAGCTC TCATTTCCCTTGCCGTTCACCTCGTCGAAGGTCGCGTTATCCACGACGCCAGCGAGCTTCCAGCTAGGGCCGATT ACGACTTCATCGTCGTTGGAGGTGGAACTGCAGGTTCTGTTCTTGCGAGTCGACTTTCGGAGGACCGCAGACGCA GCGTCTTGCTCATTGAAGCTGGCCCTGACAATGAGGGCGTTGAGGAGCTTGTAATTCCCGCTAGCTGGATGGGAG GTATTCCAGCGACATACAACTGGAACTATACCACCACCCCTCAGCCCGGGTTCCTCGATCGAGTCCAACCCTACG ATCGAGGCCACGTTCTCGGTGGCAGCAGCGCTCTCAACGCAATGGTTTACACTCGAGGAGCGTCGGAAGACTATG ATGAGTGGGCCAGGCTCACTGGCGACTCCGGCTGGAGGTGGAACAATCTCTTCCCCCTCATCAAGCGCCATGAGA AATGGGTCCCACCCGCTGGAGGTCGCGATGTCTCTGGTCAATATGACCCCAATGCTCACGGTTACGACGGAAACA CCCAAGTTTCGCTGCCATGGAGTGGACCGAACGCATTCGACGCCAAGGCAATCGCCGCCGCCGAGAGCTCTTCCG AGCACTCTTTCAATCTGGATGGGAACTCTGGATCCCCTCTGGGACTCACATGGATTCAGTCCACCATAGGCAACG GAGAGCGCAGCAGCGCGGCAACTGCCTACCTCAGCCAATCTGTTCGTGACAGACCCAATTTGACTATCCTCACGA ACACGTATACCACCCGTGTTCTCCCAACTGGATTGAGCATACTCAAGGACTTCCGCACGGTCGAATTCGCATCGA GAAATGGAGGTCCACTAAGGAAACTCACCGCCAAAAAGGAAGTTATCCTTTCGGCGGGTGCCTTTGGCTCGCCGC AGATCCTCCAGAACTCCGGTATTGGTGATCGACGAGACCTTTCTCGAGTCGGCGTCAGGACTGTCCACGACCTCC CCGACGTTGGAAAGGGACTTTCTGATCACGTTACTTCCACCGCCCTCTGGTTCACCACCGACACCTCAGCTCCAC CGATGGATCCCGCCGATGCGATGGCTATGTGGCAGAACAACCGCACCGGACCCCTCACCGAGGCTGTTGGTCACC AAATTCTGTGGGCAAGAATCCCAGAGAGCTCTGGCATCTTTGCCAACCACCCTGACCCTGCTCCGAGCCCTAACA CTCCTCACCTCGAGGTCGCACTCACCACCTACGGCGAAGTTGCTGGCGCTTTCATTGTTTTGATGACTCCTCATT CGCGCGGAACTGTCAAGATCGCCTCCAATAACCCATTCGATGCCCCCATCATCGATCCTGGTTGGCTCTCGCACG AATGGGACGTCCAGGCTCTCACTGAGGGCATCCGTCTCGTCAAGAGATTCTATAACGAGCCTGCTTGGGATGGCT ACTTCACTGCTCCCCTCACCCCGGACCCAGACCTCACTCCCATCGCCGAATTCCACCAGCACATCAGGAACACCT CTGGCGCAACTTCGCATGCCTCAGGAACAGCAGCCATGTCGGCTAGGGGTGCGAGGAATGGCGTCGTTGACCCAG ATTTGAAGGTGAAGGGCCTCAGGGGCCTCCGCGTCGTCGACGCATCTGTTTTCCCCATCATTCCTAGCGCGACCA CGCAAGGTCCCGTCTACTTCGTCGCCGAGAGGGCCGCTGATTTGATCAAGAGGTCATGGATGTTCTGGCCTTTCT AAAACAATCCTGTACTGTGTCCTTCCGACTCCACGCTCTTTTGTGTTTTTGTTTGTCTTGTTGTATACCTTAAAG TCCTCTGATCGTTTGTTTCATAATCTACTTGTATTCACTACTCTGAATGCAACTTCTGTTTTGCTAGTA |
Length | 1944 |
Sequence id | CopciAB_488576.T0 |
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Sequence |
>CopciAB_488576.T0 AGCAACGAGCTTCCCCCAACTCCAACTGTTCTACTGTCTTTCTCTAAATTATGAAGCTCCTAGCCCTCTCAGCTC TCATTTCCCTTGCCGTTCACCTCGTCGAAGGTCGCGTTATCCACGACGCCAGCGAGCTTCCAGCTAGGGCCGATT ACGACTTCATCGTCGTTGGAGGTACGTTCTAATCATTTCTAGAAGCCTGCTCTCGCTCATCCCGCTCTAGGTGGA ACTGCAGGTTCTGTTCTTGCGAGTCGACTTTCGGAGGACCGCAGACGCAGCGTCTTGCTCATTGAAGCTGGCCCT GAGTAAGTCCCACATTGTTGTGTTCCCCGCTTTCATACTTATCTCCTTTAATTCTAGCAATGAGGGCGTTGAGGA GCTTGTAATTCCCGCTAGCTGGATGGGAGGTATTCCAGCGACATACAACTGGAACTATACCACCACCCCTCAGCC CGGGTTCCTCGATCGAGTCCAACCCTACGATCGAGGCCACGTTCTCGGTGGCAGCAGCGCTCTCAGTAAGCTTTT GTTCGTCCATTCCGACTACCGGTTTGTTGACTCATCTCCTTTAGACGCAATGGTTTACACTCGAGGAGCGTCGGA AGACTATGATGAGTGGGCCAGGCTCACTGGCGACTCCGGCTGGAGGTGGAACAATCTCTTCCCCCTCATCAAGCG CGTACGTCTATTGATAATGATCTGTCCGTAGCGCGCGTGCTAAACCAACCGTTACAGCATGAGAAATGGGTCCCA CCCGCTGGAGGTCGCGATGTCTCTGGTCAATATGACCCCAATGCTCACGGTTACGACGGAAACACCCAAGTTTCG CTGCCATGGAGTGGACCGAACGCATTCGACGCCAAGGCAATCGCCGCCGCCGAGAGCTCTTCCGAGCACTCTTTC AATCTGGATGGGAACTCTGGATCCCCTCTGGGACTCAGTGAGTTGAACCCCCCTCTCGCACTCTGCAACTGTCTA AATTCGGTTTGATAGCATGGATTCAGTCCACCATAGGCAACGGAGAGCGCAGCAGCGCGGCAACTGCCTACCTCA GCCAATCTGTTCGTGACAGACCCAATTTGACTATCCTCACGAACACGTATACCACCCGTGTTCTCCCAACTGGAT TGAGCATACTCAAGGACTTCCGCACGGTCGAATTCGCATCGAGAAATGGAGGTTCGTCGCTGCTTATGTCCTGTG AACACGATTCTCATTTGCTGCAGGTCCACTAAGGAAACTCACCGCCAAAAAGGAAGTTATCCTTTCGGCGGGTGC CTTTGGCTCGCCGCAGATCCTCCAGAACTCCGGTATTGGTGATCGACGAGACCTTTCTCGAGTCGGCGTCAGGAC TGTCCACGACCTCCCCGACGTTGGAAAGGGACTTTCTGATCACGTTACTTCCACCGCCCTCTGGTTCACCACCGA CACCTCAGCTCCACCGATGGATCCCGCCGATGCGATGGCTATGTGGCAGAACAACCGCACCGGACCCCTCACCGA GGCTGTTGGTCACCAAATTCTGTGGGCAAGAATCCCAGAGAGCTCTGGCATCTTTGCCAACCACCCTGACCCTGC TCCGAGCCCTAACACTCCTCACCTCGAGGTCGCACTCACCACCTACGGCGAAGTTGCTGGCGCTTTCATTGTTTT GATGACTCCTCATTCGCGCGGAACTGTCAAGATCGCCTCCAATAACCCATTCGATGCCCCCATCATCGATCCTGG TTGGCTCTCGCACGAATGGGACGTCCAGGCTCTCACTGAGGGCATCCGTCTCGTCAAGAGATTCTATAACGAGCC TGCTTGGGATGGCTACTTCACTGCTCCCCTCACCCCGGACCCAGACCTCACTCCCATCGCCGAATTCCACCAGCA CATCAGGAACACCTCTGGCGCAACTTCGCATGCCTCAGGAACAGCAGCCATGTCGGCTAGGGGTGCGAGGAATGG CGTCGTTGACCCAGATTTGAAGGTGAAGGGCCTCAGGGGCCTCCGCGTCGTCGACGCATCTGTTTTCGTAAGTGA TGGAGTTTATTTCAGTATGCTATATGATACTCATCTGTTTCTTCCTAGCCCATCATTCCTAGCGCGACCACGCAA GGTCCCGTCTACTTCGTCGCCGAGAGGGCCGCTGATTTGATCAAGAGGTCATGGATGTTCTGGCCTTTCTAAAAC AATCCTGTACTGTGTCCTTCCGACTCCACGCTCTTTTGTGTTTTTGTTTGTCTTGTTGTATACCTTAAAGTCCTC TGATCGTTTGTTTCATAATCTACTTGTATTCACTACTCTGAATGCAACTTCTGTTTTGCTAGTA |
Length | 2314 |