Systematic name | CopciAB_494420 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 494420 |
Uniprot id | Functional description | Basic region leucine zipper | |
Location | scaffold_4:2739707..2741214 | Strand | + |
Gene length (nt) | 1508 | Transcript length (nt) | 1508 |
CDS length (nt) | 1071 | Protein length (aa) | 356 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Agrocybe aegerita | Agrae_CAA7261810 | 59.2 | 8.916E-108 | 350 |
Hypsizygus marmoreus strain 51987-8 | Hypma_RDB25503 | 54.3 | 3.36E-102 | 334 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_192345 | 48.8 | 8.143E-85 | 283 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_112379 | 49.1 | 8.486E-85 | 283 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_115892 | 45.2 | 2.612E-71 | 244 |
Pleurotus eryngii ATCC 90797 | Pleery1_1453974 | 44.9 | 3.073E-70 | 241 |
Pleurotus ostreatus PC15 | PleosPC15_2_1089335 | 45.6 | 1.269E-69 | 239 |
Pleurotus ostreatus PC9 | PleosPC9_1_117842 | 45.6 | 1.242E-69 | 239 |
Grifola frondosa | Grifr_OBZ70940 | 43.2 | 7.056E-68 | 234 |
Schizophyllum commune H4-8 | Schco3_1157466 | 44 | 2.658E-62 | 218 |
Flammulina velutipes | Flave_chr07AA00243 | 43.5 | 6.778E-56 | 199 |
Lentinula edodes NBRC 111202 | Lenedo1_875801 | 41 | 1.001E-49 | 181 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_9962 | 41 | 9.928E-50 | 181 |
Lentinula edodes B17 | Lened_B_1_1_9120 | 38.8 | 4.142E-47 | 173 |
Auricularia subglabra | Aurde3_1_1278313 | 36.2 | 1.114E-38 | 149 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_494420.T0 |
Description | Basic region leucine zipper |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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CDD | cd14705 | bZIP_Zip1 | - | 256 | 310 |
Pfam | PF07716 | Basic region leucine zipper | IPR004827 | 255 | 305 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR004827 | Basic-leucine zipper domain |
IPR046347 | Basic-leucine zipper domain superfamily |
Go id | Term | Ontology |
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GO:0003700 | DNA-binding transcription factor activity | MF |
GO:0006355 | regulation of transcription, DNA-templated | BP |
KEGG Orthology |
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No records |
COG category | Description |
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K | Basic region leucine zipper |
Class | Family | Subfamily |
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No records |
Group |
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leucine zipper |
Arrow shows the origin of gene family containing CopciAB_494420.
Sequence id | CopciAB_494420.T0 |
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Sequence |
>CopciAB_494420.T0 MPPNLNGLNVVHPTIHSDSHDLLAGQQYQDLSAQLDLWTNLTFDSEDPLTTSRPNDDKYSRKSLSDEEEEEAARS PVTTEKAVHDGHVNVVTPTNIGTNEPRQPAPAQPALPPFDLNSFLVGFGIDPFAAAPQLQQQPIAPSLAQLLAFH SAAAAAQHIPPPPPFVPASHQIQQQQQASSASNLPLPITSYRPTQPAAPTAAESVPPTPTTSTEESQQQQQQQAP AAKRARTRKASVSNPDSPDAETPSPAALSAAEDKRRRNTAASARFRLKKKEREAALEGKAKELELKVSELERECE ALRRENGWLKGLVVGVTGAAQGPVPPPLIPSAQTLQSLTASASTGSKRRREDGDNA |
Length | 356 |
Sequence id | CopciAB_494420.T0 |
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Sequence |
>CopciAB_494420.T0 ATGCCCCCAAATCTAAACGGCCTCAACGTCGTCCACCCGACGATTCACAGCGACAGCCACGATCTGCTTGCAGGC CAGCAATACCAGGATCTCTCAGCCCAGCTCGACCTATGGACAAATCTCACTTTCGACTCTGAGGACCCCCTCACG ACGTCCAGGCCCAATGACGACAAGTACTCCAGAAAATCTCTTTCCGATGAGGAAGAAGAAGAAGCCGCGCGTTCT CCAGTGACAACCGAAAAAGCTGTCCATGACGGGCACGTTAATGTGGTGACCCCCACCAATATCGGCACAAATGAG CCCCGCCAACCTGCCCCTGCCCAACCCGCTCTGCCGCCCTTCGATTTGAACAGTTTCCTGGTCGGCTTTGGCATC GACCCCTTTGCCGCTGCTCCTCAGCTACAGCAGCAGCCAATCGCCCCTTCTCTGGCTCAGCTGCTCGCTTTCCAC TCTGCTGCGGCTGCTGCTCAGCACATCCCACCCCCACCACCCTTCGTTCCCGCCTCTCACCAAATCCAGCAACAA CAACAAGCTTCATCTGCTTCGAACCTCCCTCTCCCGATCACATCATACCGCCCCACACAACCCGCCGCTCCAACA GCAGCCGAGTCGGTCCCTCCCACCCCCACTACTTCGACTGAGGAATCCCAGCAGCAGCAGCAGCAACAAGCCCCC GCTGCCAAGCGTGCCCGCACCCGCAAGGCCTCCGTCTCCAACCCCGATTCTCCCGACGCCGAAACACCCTCCCCC GCTGCCCTCTCTGCCGCTGAGGACAAACGTCGGAGAAACACCGCTGCGAGTGCCCGGTTCAGGTTGAAGAAGAAG GAGCGGGAGGCGGCGCTGGAGGGCAAGGCGAAGGAGTTGGAGCTCAAGGTTAGCGAGCTGGAGAGGGAATGCGAG GCACTCCGTCGCGAGAACGGTTGGCTCAAGGGCCTCGTGGTCGGTGTTACGGGCGCAGCCCAGGGACCCGTCCCC CCTCCCCTCATCCCCTCCGCACAAACCCTCCAATCCCTGACCGCATCAGCATCGACAGGCAGCAAACGTCGACGA GAAGATGGTGATAATGCTTAA |
Length | 1071 |
Sequence id | CopciAB_494420.T0 |
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Sequence |
>CopciAB_494420.T0 AGGTCCACATTTTCCATTCTCTCTTCCTTTGCACATCGTCCCCGACACTCAGATGCCCCCAAATCTAAACGGCCT CAACGTCGTCCACCCGACGATTCACAGCGACAGCCACGATCTGCTTGCAGGCCAGCAATACCAGGATCTCTCAGC CCAGCTCGACCTATGGACAAATCTCACTTTCGACTCTGAGGACCCCCTCACGACGTCCAGGCCCAATGACGACAA GTACTCCAGAAAATCTCTTTCCGATGAGGAAGAAGAAGAAGCCGCGCGTTCTCCAGTGACAACCGAAAAAGCTGT CCATGACGGGCACGTTAATGTGGTGACCCCCACCAATATCGGCACAAATGAGCCCCGCCAACCTGCCCCTGCCCA ACCCGCTCTGCCGCCCTTCGATTTGAACAGTTTCCTGGTCGGCTTTGGCATCGACCCCTTTGCCGCTGCTCCTCA GCTACAGCAGCAGCCAATCGCCCCTTCTCTGGCTCAGCTGCTCGCTTTCCACTCTGCTGCGGCTGCTGCTCAGCA CATCCCACCCCCACCACCCTTCGTTCCCGCCTCTCACCAAATCCAGCAACAACAACAAGCTTCATCTGCTTCGAA CCTCCCTCTCCCGATCACATCATACCGCCCCACACAACCCGCCGCTCCAACAGCAGCCGAGTCGGTCCCTCCCAC CCCCACTACTTCGACTGAGGAATCCCAGCAGCAGCAGCAGCAACAAGCCCCCGCTGCCAAGCGTGCCCGCACCCG CAAGGCCTCCGTCTCCAACCCCGATTCTCCCGACGCCGAAACACCCTCCCCCGCTGCCCTCTCTGCCGCTGAGGA CAAACGTCGGAGAAACACCGCTGCGAGTGCCCGGTTCAGGTTGAAGAAGAAGGAGCGGGAGGCGGCGCTGGAGGG CAAGGCGAAGGAGTTGGAGCTCAAGGTTAGCGAGCTGGAGAGGGAATGCGAGGCACTCCGTCGCGAGAACGGTTG GCTCAAGGGCCTCGTGGTCGGTGTTACGGGCGCAGCCCAGGGACCCGTCCCCCCTCCCCTCATCCCCTCCGCACA AACCCTCCAATCCCTGACCGCATCAGCATCGACAGGCAGCAAACGTCGACGAGAAGATGGTGATAATGCTTAATA CAATCGCGTTACTGGACGGACGACAAGAGGAACGAGGCTTATGCCTTTTTTTATCTCTTTACGTAGTATAAATCC CATTGCTCGTTTTCATCTTTCCCTTTCACCTTAATTATCTATATCACGCAATTTCATGCCGGCTTCAACGACCTG CGCACACGCCCCATGACACTCAACCACATTCAAGTTCTCTTCTCGCTGCTAAGGCCATCGAGTCTCGTGCTGCTA TTGTTGTATTATCCATCTCGCTCCCTTGCTTTCCCCCTATTCACCATTTCTCACATTTGACACGCTGCACCACCC GGGTATACTGTACACTCTGTATCAATAGTGTCTATCGCTACGTCTACGCTGTTGTAAAAAAAAAAAAAAAATTGA ATGACTCG |
Length | 1508 |
Sequence id | CopciAB_494420.T0 |
---|---|
Sequence |
>CopciAB_494420.T0 AGGTCCACATTTTCCATTCTCTCTTCCTTTGCACATCGTCCCCGACACTCAGATGCCCCCAAATCTAAACGGCCT CAACGTCGTCCACCCGACGATTCACAGCGACAGCCACGATCTGCTTGCAGGCCAGCAATACCAGGATCTCTCAGC CCAGCTCGACCTATGGACAAATCTCACTTTCGACTCTGAGGACCCCCTCACGACGTCCAGGCCCAATGACGACAA GTACTCCAGAAAATCTCTTTCCGATGAGGAAGAAGAAGAAGCCGCGCGTTCTCCAGTGACAACCGAAAAAGCTGT CCATGACGGGCACGTTAATGTGGTGACCCCCACCAATATCGGCACAAATGAGCCCCGCCAACCTGCCCCTGCCCA ACCCGCTCTGCCGCCCTTCGATTTGAACAGTTTCCTGGTCGGCTTTGGCATCGACCCCTTTGCCGCTGCTCCTCA GCTACAGCAGCAGCCAATCGCCCCTTCTCTGGCTCAGCTGCTCGCTTTCCACTCTGCTGCGGCTGCTGCTCAGCA CATCCCACCCCCACCACCCTTCGTTCCCGCCTCTCACCAAATCCAGCAACAACAACAAGCTTCATCTGCTTCGAA CCTCCCTCTCCCGATCACATCATACCGCCCCACACAACCCGCCGCTCCAACAGCAGCCGAGTCGGTCCCTCCCAC CCCCACTACTTCGACTGAGGAATCCCAGCAGCAGCAGCAGCAACAAGCCCCCGCTGCCAAGCGTGCCCGCACCCG CAAGGCCTCCGTCTCCAACCCCGATTCTCCCGACGCCGAAACACCCTCCCCCGCTGCCCTCTCTGCCGCTGAGGA CAAACGTCGGAGAAACACCGCTGCGAGTGCCCGGTTCAGGTTGAAGAAGAAGGAGCGGGAGGCGGCGCTGGAGGG CAAGGCGAAGGAGTTGGAGCTCAAGGTTAGCGAGCTGGAGAGGGAATGCGAGGCACTCCGTCGCGAGAACGGTTG GCTCAAGGGCCTCGTGGTCGGTGTTACGGGCGCAGCCCAGGGACCCGTCCCCCCTCCCCTCATCCCCTCCGCACA AACCCTCCAATCCCTGACCGCATCAGCATCGACAGGCAGCAAACGTCGACGAGAAGATGGTGATAATGCTTAATA CAATCGCGTTACTGGACGGACGACAAGAGGAACGAGGCTTATGCCTTTTTTTATCTCTTTACGTAGTATAAATCC CATTGCTCGTTTTCATCTTTCCCTTTCACCTTAATTATCTATATCACGCAATTTCATGCCGGCTTCAACGACCTG CGCACACGCCCCATGACACTCAACCACATTCAAGTTCTCTTCTCGCTGCTAAGGCCATCGAGTCTCGTGCTGCTA TTGTTGTATTATCCATCTCGCTCCCTTGCTTTCCCCCTATTCACCATTTCTCACATTTGACACGCTGCACCACCC GGGTATACTGTACACTCTGTATCAATAGTGTCTATCGCTACGTCTACGCTGTTGTAAAAAAAAAAAAAAAATTGA ATGACTCG |
Length | 1508 |