Systematic name | CopciAB_496411 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 496411 |
Uniprot id | Functional description | Belongs to the glycosyl hydrolase 5 (cellulase A) family | |
Location | scaffold_13:972620..974524 | Strand | - |
Gene length (nt) | 1905 | Transcript length (nt) | 1567 |
CDS length (nt) | 1440 | Protein length (aa) | 479 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Pleurotus ostreatus PC9 | PleosPC9_1_117470 | 76.9 | 3.141E-269 | 823 |
Flammulina velutipes | Flave_chr07AA00494 | 75.5 | 3.784E-268 | 820 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_62269 | 76.7 | 7.017E-268 | 819 |
Pleurotus eryngii ATCC 90797 | Pleery1_1391373 | 76.2 | 9.171E-268 | 819 |
Pleurotus ostreatus PC15 | PleosPC15_2_1095040 | 76.4 | 1.731E-267 | 818 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_229390 | 76.5 | 3.32E-267 | 817 |
Agrocybe aegerita | Agrae_CAA7269429 | 76.4 | 1.041E-266 | 816 |
Hypsizygus marmoreus strain 51987-8 | Hypma_RDB24083 | 76.5 | 5.777E-266 | 814 |
Lentinula edodes B17 | Lened_B_1_1_181 | 75 | 5.574E-262 | 802 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_122126 | 74.8 | 7.075E-261 | 799 |
Lentinula edodes NBRC 111202 | Lenedo1_1034648 | 74.2 | 3.799E-260 | 797 |
Schizophyllum commune H4-8 | Schco3_2637065 | 74.4 | 3.046E-255 | 783 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_15235 | 73.8 | 1.313E-254 | 781 |
Grifola frondosa | Grifr_OBZ72766 | 73.1 | 5.977E-254 | 779 |
Auricularia subglabra | Aurde3_1_1404932 | 66.6 | 1.83E-229 | 709 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_496411.T0 |
Description | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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Pfam | PF00150 | Cellulase (glycosyl hydrolase family 5) | IPR001547 | 72 | 337 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR017853 | Glycoside hydrolase superfamily |
IPR001547 | Glycoside hydrolase, family 5 |
Go id | Term | Ontology |
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GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
GO:0071704 | organic substance metabolic process | BP |
KEGG Orthology |
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K01179 |
COG category | Description |
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G | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
Class | Family | Subfamily |
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GH | GH5 | GH5_22 |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_496411.
Sequence id | CopciAB_496411.T0 |
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Sequence |
>CopciAB_496411.T0 MSLLKISGTKIVNEQGEEVILRGAGLGGWMNMENFITGYPGCEFHIREALAETIGKEKSEFFFDRFLEYFFTDAD AQFFKSLGLNCIRIAFNYRHFEDDDNPRVLKTSGFKHLDRVIDICAKHGIYTILDMHTAPGGQNTDWHSDHGTHM ANFWNHKDFQDRSLWLWSELSKHYKGNKWIAGYNPLNEPTDPKHTRVVQFYNNVYKVIRAEDPDHIIFFDGNTFA SDFSHFGDAHKNWENTAYSIHDYSNFGFPNSPVRYVGDDEQFRRLRRSYEKKRQWMDERGLCVWNGEWGPVYARR QFDGDRIDEINESRYKVLEDQLKIYNQDRLSWSIWLYKDIGFQGMIYTSPETKYMTLFNDFLAKKHRLAVDAWGS NDALVQDAYQPLIDHILKEIPEKYQNLYPYPIWKVPQRVGRLARSILVAEYLVKEWAEHFVGLSEKELDEVAQSF KFENCLKRDGLNKVLQASAPGVLGAAGSV |
Length | 479 |
Sequence id | CopciAB_496411.T0 |
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Sequence |
>CopciAB_496411.T0 ATGTCTCTTCTGAAGATCTCTGGAACTAAAATCGTCAATGAGCAGGGGGAAGAGGTCATCCTGCGGGGTGCAGGT TTGGGCGGATGGATGAACATGGAGAACTTCATCACGGGCTATCCTGGCTGTGAATTCCACATTCGCGAGGCCCTC GCTGAGACTATTGGCAAGGAGAAATCCGAGTTCTTCTTCGACAGGTTCCTGGAATACTTTTTCACCGATGCCGAT GCGCAATTCTTCAAGAGCCTGGGACTCAACTGCATTAGGATTGCTTTCAACTATCGTCACTTCGAGGACGACGAC AACCCCCGGGTTCTGAAGACCTCTGGATTCAAGCACCTCGACCGAGTGATTGATATCTGTGCGAAGCATGGCATC TACACCATCCTTGACATGCACACTGCACCGGGAGGTCAAAACACCGACTGGCATTCAGACCACGGGACACACATG GCCAACTTCTGGAACCATAAGGACTTCCAGGATCGCAGTCTCTGGTTGTGGTCTGAACTCTCAAAACACTACAAG GGCAATAAATGGATTGCCGGCTACAACCCCCTAAACGAACCGACCGATCCCAAGCACACTCGTGTTGTTCAGTTC TACAACAACGTGTACAAGGTCATCCGAGCTGAGGACCCGGACCATATCATCTTCTTCGACGGAAACACCTTTGCT TCCGACTTCTCTCACTTTGGTGACGCTCATAAGAACTGGGAGAATACCGCGTATTCCATCCACGACTACTCCAAC TTTGGATTCCCTAACTCGCCAGTGCGGTATGTCGGAGACGATGAGCAATTCCGTCGCCTCCGCCGCAGCTATGAG AAGAAGCGACAGTGGATGGATGAGCGGGGACTGTGCGTTTGGAATGGAGAATGGGGTCCAGTTTACGCTCGCCGT CAGTTTGATGGCGACCGCATCGACGAGATTAATGAATCTCGCTACAAGGTCCTTGAAGACCAACTCAAGATCTAC AACCAGGACCGATTGAGCTGGTCGATCTGGCTCTACAAGGACATCGGCTTCCAGGGTATGATCTACACCTCACCG GAAACCAAGTACATGACTCTCTTCAACGACTTCCTCGCTAAGAAGCACCGTCTGGCAGTCGACGCCTGGGGATCA AACGACGCGCTCGTTCAAGACGCCTACCAGCCCCTCATCGACCACATCCTCAAGGAGATCCCAGAGAAGTATCAG AATCTCTACCCATACCCGATCTGGAAGGTCCCTCAGCGCGTTGGTCGTCTCGCTCGCAGCATCCTCGTCGCCGAA TACCTGGTCAAGGAGTGGGCAGAGCACTTTGTCGGCTTGAGCGAGAAGGAACTCGATGAAGTCGCGCAAAGCTTC AAGTTTGAGAATTGCCTCAAGCGCGACGGGCTGAACAAGGTCTTGCAAGCCAGTGCTCCTGGGGTACTTGGCGCT GCTGGATCTGTCTGA |
Length | 1440 |
Sequence id | CopciAB_496411.T0 |
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Sequence |
>CopciAB_496411.T0 AAGAACGGTGCCATCATGTCTCTTCTGAAGATCTCTGGAACTAAAATCGTCAATGAGCAGGGGGAAGAGGTCATC CTGCGGGGTGCAGGTTTGGGCGGATGGATGAACATGGAGAACTTCATCACGGGCTATCCTGGCTGTGAATTCCAC ATTCGCGAGGCCCTCGCTGAGACTATTGGCAAGGAGAAATCCGAGTTCTTCTTCGACAGGTTCCTGGAATACTTT TTCACCGATGCCGATGCGCAATTCTTCAAGAGCCTGGGACTCAACTGCATTAGGATTGCTTTCAACTATCGTCAC TTCGAGGACGACGACAACCCCCGGGTTCTGAAGACCTCTGGATTCAAGCACCTCGACCGAGTGATTGATATCTGT GCGAAGCATGGCATCTACACCATCCTTGACATGCACACTGCACCGGGAGGTCAAAACACCGACTGGCATTCAGAC CACGGGACACACATGGCCAACTTCTGGAACCATAAGGACTTCCAGGATCGCAGTCTCTGGTTGTGGTCTGAACTC TCAAAACACTACAAGGGCAATAAATGGATTGCCGGCTACAACCCCCTAAACGAACCGACCGATCCCAAGCACACT CGTGTTGTTCAGTTCTACAACAACGTGTACAAGGTCATCCGAGCTGAGGACCCGGACCATATCATCTTCTTCGAC GGAAACACCTTTGCTTCCGACTTCTCTCACTTTGGTGACGCTCATAAGAACTGGGAGAATACCGCGTATTCCATC CACGACTACTCCAACTTTGGATTCCCTAACTCGCCAGTGCGGTATGTCGGAGACGATGAGCAATTCCGTCGCCTC CGCCGCAGCTATGAGAAGAAGCGACAGTGGATGGATGAGCGGGGACTGTGCGTTTGGAATGGAGAATGGGGTCCA GTTTACGCTCGCCGTCAGTTTGATGGCGACCGCATCGACGAGATTAATGAATCTCGCTACAAGGTCCTTGAAGAC CAACTCAAGATCTACAACCAGGACCGATTGAGCTGGTCGATCTGGCTCTACAAGGACATCGGCTTCCAGGGTATG ATCTACACCTCACCGGAAACCAAGTACATGACTCTCTTCAACGACTTCCTCGCTAAGAAGCACCGTCTGGCAGTC GACGCCTGGGGATCAAACGACGCGCTCGTTCAAGACGCCTACCAGCCCCTCATCGACCACATCCTCAAGGAGATC CCAGAGAAGTATCAGAATCTCTACCCATACCCGATCTGGAAGGTCCCTCAGCGCGTTGGTCGTCTCGCTCGCAGC ATCCTCGTCGCCGAATACCTGGTCAAGGAGTGGGCAGAGCACTTTGTCGGCTTGAGCGAGAAGGAACTCGATGAA GTCGCGCAAAGCTTCAAGTTTGAGAATTGCCTCAAGCGCGACGGGCTGAACAAGGTCTTGCAAGCCAGTGCTCCT GGGGTACTTGGCGCTGCTGGATCTGTCTGAGCTGTGGTAGGCCCCTAATCAGGTCGGATCTTATCTGAGTGGGAA TGAAAGGTAGCAGGAAGTGAAATCCGCCATGTATTATTAGCGCGTTGAAGATAACGACGTTCTCGTT |
Length | 1567 |
Sequence id | CopciAB_496411.T0 |
---|---|
Sequence |
>CopciAB_496411.T0 AAGAACGGTGCCATCATGTCTCTTCTGAAGATCTCTGGAACTAAAATCGTCAATGAGCAGGGGGAAGAGGTCATC CTGCGGGGTGCAGGTTTGGGCGGATGGATGAAGTACGTTCAACTTTACTCTAAGCGCCCGAAGATGTAGCTTACA TCTCTTCTGTAGCATGGAGAACTTCATCACGGGTAAATAGGGGTATTCCAATCGAGATGCACGTCTCTAAGTGTC ACTCAAGGCTATCCTGGCTGTGAATTCCACATTCGCGAGGCCCTCGCTGAGACTATTGGCAAGGAGAAATCCGAG TTCTTCTTCGACAGGGTAAGCGCTATGCATTGTCGAATAACCCGCGCAAGATCGACTAACTTTGTCAATACAGTT CCTGGAATACTTTTTCACCGATGCCGATGCGCAATTCTTCAAGAGCCTGGGACTCAACTGCATTAGGATTGCTTT CAACTATCGTCACTTCGAGGGTTCGTCCGAGTCCATGGTCCACTCCTTGACCATGCGCTTACCGTCTACGTGTTA CAGACGACGACAACCCCCGGGTTCTGAAGACCTCTGGATTCAAGCACCTCGACCGAGTGATTGATATCTGTGCGA AGCATGGCATCTACACCATCCTTGACATGCACACTGCACCGGGAGGTCAAAACACCGACTGGCATTCAGACCACG GGACACACATGGCCAACTGTGCGTGGCTTACAGCTTTCTTATCTTTGACCTCATGTTTTTGACTTGAACTCTCCA ACAGTCTGGAACCATAAGGACTTCCAGGATCGCAGTCTCTGGTTGTGGTCTGAACTCTCAAAACACTACAAGGGC AATAAATGGATTGCCGGCTACAACCCCCTAAACGAACCGACCGATCCCAAGCACACTCGTGTTGTTCAGTTCTAC AACAACGTGTACAAGGTCATCCGAGCTGAGGACCCGGACCATATCATCTTCTTCGACGGAAACACCTTTGCTTCC GACTTCTCTCACTTTGGTGACGCTCATAAGAACTGGGAGAATACCGCGTATTCCATCCACGACTACTCCAACTTT GGATTCCCTAACTCGCCAGTGCGGTATGTCGGAGACGATGAGCAATTCCGTCGCCTCCGCCGCAGCTATGAGAAG AAGCGACAGTGGATGGATGAGCGGGGACTGTGCGTTTGGAATGGAGAATGGGGTCCAGTTTACGCTCGCCGTCAG TTTGATGGCGACCGCATCGACGAGATTAATGAATCTCGCTACAAGGTCCTTGAAGACCAACTCAAGATCTACAAC CAGGTATTCCCTGTCATTCCCTCGCTTTCCGAGCACAACCTGAGCCGTTTCCCGAATAGGACCGATTGAGCTGGT CGATCTGGCTCTACAAGGACATCGGCTTCCAGGGTATGATCTACACCTCACCGGAAACCAAGTACATGACTCTCT TCAACGACTTCCTCGCTAAGAAGCACCGTCTGGCAGTCGACGCCTGGGGATCAAACGACGCGCTCGTTCAAGACG CCTACCAGCCCCTCATCGACCACATCCTCAAGGAGATCCCAGAGAAGTATCAGAATCTCTACCCATACCCGATCT GGAAGGTCCCTCAGCGCGTTGGTCGTCTCGCTCGCAGCATCCTCGTCGCCGAATACCTGGTCAAGGAGTGGGCAG AGCACTTTGTCGGCTTGAGCGAGAAGGAACTCGATGAAGTCGCGCAAAGCTTCAAGTTTGAGAATTGCCTCAAGC GCGACGGGCTGAACAAGGTCTTGCAAGCCAGTGCTCCTGGGGTACTTGGCGCTGCTGGATCTGTCTGAGCTGTGG TAGGCCCCTAATCAGGTCGGATCTTATCTGAGTGGGAATGAAAGGTAGCAGGAAGTGAAATCCGCCATGTATTAT TAGCGCGTTGAAGATAACGACGTTCTCGTT |
Length | 1905 |