CopciAB_538972
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_538972 Strain Coprinopsis cinerea Okayama 7
Standard name BUB1 Synonyms 538972
Uniprot id Functional description Mad3/BUB1 hoMad3/BUB1 homology region 1
Location scaffold_3:1227268..1231236 Strand +
Gene length (nt) 3969 Transcript length (nt) 3742
CDS length (nt) 3579 Protein length (aa) 1192

Reciprocal best hits in model fungi

Strain name Gene / Protein name
Aspergillus nidulans sldA
Neurospora crassa NCU10043
Schizosaccharomyces pombe SPCC1322.12c
Saccharomyces cerevisiae BUB1
Candida albicans BUB1

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7267003 59.6 0 1399
Hypsizygus marmoreus strain 51987-8 Hypma_RDB26141 58.4 0 1345
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_75445 53.7 0 1219
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_201858 53.4 0 1211
Pleurotus ostreatus PC15 PleosPC15_2_1085898 48.2 0 1060
Pleurotus eryngii ATCC 90797 Pleery1_1389126 48.3 0 1059
Pleurotus ostreatus PC9 PleosPC9_1_86888 48.6 0 1059
Ganoderma sp. 10597 SS1 v1.0 Gansp1_166822 47 0 1054
Lentinula edodes NBRC 111202 Lenedo1_1111555 48.7 0 1045
Lentinula edodes B17 Lened_B_1_1_6721 48.6 0 1041
Flammulina velutipes Flave_chr09AA01160 47.9 0 1028
Lentinula edodes W1-26 v1.0 Lentinedodes1_11309 48.1 4.941E-304 1020
Grifola frondosa Grifr_OBZ72669 46.9 6.126E-304 1013
Schizophyllum commune H4-8 Schco3_2753335 43.6 6.466E-304 987
Auricularia subglabra Aurde3_1_1339226 34.1 7.241E-188 621

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 33.1855 6.0545 3.4956
oidia 65.3456 11.3813 6.571
vegetative_mycelium 58.2335 2.9406 1.6978
primordia 71.2128 5.1151 2.9532
hyphal_knot 32.4455 3.3424 1.9297
young_fruiting_body 85.6438 16.9917 9.8102
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 26.2432 1.3351 0.7708
Wheat bran 47.5679 16.02 9.2492
Horse manure 55.5867 10.0807 5.8201
Oak leaves 48.6341 16.7496 9.6704
Hay 56.2007 10.3371 5.9681
Corn stalk 55.0298 7.5327 4.349
Pectine 51.0483 1.3757 0.7942
Microcrystalline cellulose 31.5282 4.0453 2.3356
Xylose 29.5999 2.7579 1.5923
Cellobiose 24.447 6.2866 3.6296
Lignin 42.2419 12.1089 6.9911
Apple peels 38.4235 0.1838 0.1061
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 69.2562 5.0716 2.9281
Bsubtilis 53.1444 4.566 2.6362
Ecoli 35.6989 2.8818 1.6638
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 1.699 1.1789 0.6806
BS 4h 28.1197 6.6193 3.8217
BS 8h 88.694 7.171 4.1402
BS 12h 89.8565 10.3689 5.9865
Oidia 0 h 6.2175 0.8443 0.4875
Oidia 18 h 46.0607 12.4245 7.1733
Sclerotia 22.8828 3.5836 2.069
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 52.1011 10.1055 5.8344
DM 36h 54.748 7.4091 4.2777
DM 60h 44.0415 8.1982 4.7332
DM 84h 41.6929 0.2178 0.1258
DM 108h 34.3761 2.8169 1.6264
DM 132h 36.0662 8.4796 4.8957
DM 156hAE 31.3681 9.1578 5.2872
ELI1hAE 50.201 8.8518 5.1106
ELI2hAE 48.2637 6.908 3.9883
LI2hAE 47.6166 6.8406 3.9494
LI6hAE 54.3421 2.7308 1.5766
LI12hAE 54.6293 5.8445 3.3743
LI18hAE 40.9489 9.8384 5.6802
LI 24hAE 26.634 8.528 4.9236
DM 156hAM 27.6374 5.2798 3.0483
ELI1hAM 50.9364 13.777 7.9542
ELI2hAM 59.727 8.8673 5.1195
LI2hAM 55.5185 2.7105 1.5649
LI6hAM 57.2411 3.8941 2.2483
LI12hAM 39.117 1.7891 1.033
LI18hAM 25.9102 8.7379 5.0449
LI 24hAM 15.654 1.6583 0.9574
LI 24hHK 23.1945 6.9403 4.007
L/D 6h 17.6175 2.4649 1.4231
L/D 12h 18.5664 9.3053 5.3724
L/D 18h 29.0372 6.8046 3.9286
L/D 24h 46.249 3.6279 2.0946
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 20.3225 3.6111 2.0849
Hyphal knots 35.0513 16.5917 9.5792
Primordium 1 54.5457 21.0622 12.1602
Primordium 2 42.5737 7.6776 4.4326
Young Fruiting body cap 21.9661 14.0294 8.0999
Younf fruiting body gill 43.5979 1.5679 0.9052
Young fruiting body stipe 51.7538 18.2036 10.5098
Mature fruiting body cap_gill 4.2311 0.2965 0.1712
Mature fruiting body stipe 7.1137 0.5012 0.2894
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 51.0072 4.179 2.4127
NH4NO3 55.2687 3.8736 2.2365
Proline 52.7478 8.5852 4.9567
Tryptophan 41.8118 10.4441 6.0299
Isoleucin 49.8512 3.0052 1.735
Arginine 57.8359 5.4947 3.1724
Metionine 49.5039 5.4474 3.1451
NaNO3 52.9535 3.838 2.2159
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 51.0072 4.179 2.4127
Citrus peel 30.2268 4.0542 2.3407
Poplar leaves 54.6691 6.2135 3.5874
Typha leaves 63.4177 10.6585 6.1537
Overwintered Salix leaves 61.0324 7.3008 4.2151
Reed flowering 49.2521 19.6763 11.3601
Tigernut 51.9932 3.2958 1.9028
Energy cane 53.1365 1.1736 0.6776
Guar gum 53.7052 18.9418 10.9361
Apple peels 67.715 13.7982 7.9664
Cellobiose 68.1911 7.7997 4.5032
Corn stalk 68.4787 4.7837 2.7619
Horse manure 50.9761 14.6602 8.4641
Lignin 29.9171 17.0259 9.8299
Microcrystalline cellulose 55.6741 12.4922 7.2124
Oak leaves 64.2395 6.313 3.6448
Pectin esterified 47.7955 7.3741 4.2574
Poplar sawdust 49.354 15.6645 9.0439
Wheat bran 51.9534 5.9113 3.4129
Chlamydomonas reinhardtii 55.2582 10.8685 6.2749
Vertatryl alcohol 13.1311 2.1861 1.2622
Furfural 33.4595 1.4612 0.8436
Autoclaved mycelium 54.385 3.5481 2.0485
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 80.6155 2.5805 1.4899
Ribose 78.2482 0.9778 0.5646
Mannose 90.7765 1.7841 1.2615
Fructose 76.0671 8.1417 4.7006
Arabinose 77.0235 3.5777 2.0656
Xylose 87.2777 1.9247 1.1112
Galacturonic acid 81.1819 18.7412 10.8203
Rhamnogalacturonan 69.7604 1.4649 0.8457
Pectin esterified 69.7817 2.1435 1.2376
Polygalacturonic acid 69.2649 8.4663 4.888
Sodium acetate 88.5853 5.7684 3.3304
No nitrogen 86.639 9.3141 5.3775
BSA 76.6368 5.9246 3.4205
Glutamine 73.3939 9.9126 5.7231
No phosphate 91.8151 5.3132 3.0676
No carbon 77.3254 5.3097 3.7545
No sulphur 90.0404 13.2657 7.6589
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 51.0072 4.179 2.4127
Amylose 47.8886 1.7473 1.0088
Fucose 48.2281 4.2869 2.4751
Galactose 41.2816 5.7021 3.2921
Lactose 42.0691 7.58 4.3763
Maltose 39.6541 12.5295 7.2339
Mannitol 43.2806 9.3062 5.373
Rhamnose 46.8247 9.3782 5.4145
Sorbitol 46.2174 2.8105 1.6226
Trehalose 52.4051 7.7843 4.4942
Glycerol 45.2791 0.4163 0.2404
Glucuronic acid 53.913 13.3892 7.7302
Arabinan 46.1847 0.7273 0.4199
Galactan 58.2415 4.8244 2.7853
Galactomannan 59.3283 6.0368 3.4854
Glucan 48.5717 4.0011 2.31
Xylan 58.3183 1.5107 0.8722
Xyloglucan 62.7943 3.3896 1.957
Arabinogalactan 57.2889 10.2097 5.8946
Pectin 22.1561 3.0939 1.7863
Rhamnogalacturonan 29.3664 6.9981 4.0403
Polygalacturonic acid 44.364 4.9395 2.8518
Mannan 49.6771 3.054 1.7632
Amylopectin 41.0566 9.0716 5.2375
Inulin 55.8164 11.8982 6.8694
BSA 57.8081 3.1296 1.8069
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 44.0415 8.1982 4.7332
2h WAT 60.6734 5.7729 3.333
4h WAT 49.49 8.7404 5.0463
8h WAT 37.1194 3.8881 2.2448
16h WAT 47.1928 1.6457 0.9501
24h WAT 41.4581 2.7828 1.6066
WAT hyphal knot -30h 67.5494 1.9616 1.1326
WAT hyphal knot -22h 85.8618 5.2559 3.0345
WAT hyphal knot -15h 62.1574 6.6856 3.8599
WAT hyphal knot -7.5h 47.866 8.1644 4.7137
WAT hyphal knot 50.5686 5.9255 3.4211
WAT hyphal knot +7.5h 52.593 6.8911 3.9786
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 44.3994 19.2418 11.1093
Straw 3h 34.4357 3.4851 2.0121
Straw 6h 38.4961 16.5855 9.5756
Straw 12h 65.9372 9.8491 5.6864
Straw 24h 48.3451 18.761 10.8317
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 35.4036 3.0067 1.7359
Frost (-20C, 30min) 27.1093 3.172 1.8314
Heat shock (47C, 2h) 8.5882 2.2289 1.2869
High CO2 27.8829 4.8301 2.7887
Drought (4% agar, 12h) 35.0317 3.4297 1.9801
Oxidative (1mM H2O2, 3h) 15.0223 6.0265 3.4794
Acidic (pH4, 3h) 25.3288 1.5656 0.9039
Alkaline (pH9, 3h) 41.8853 4.7635 2.7502
Osmotic (sorbitol 2h) 24.0021 1.9169 1.1067
CongoRed (3h) 21.9744 6.4399 3.7181
Cobalt chloride control 18.6817 4.018 2.3198
Cobalt chloride 2mM 17.2074 2.7819 1.6061
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 36.1715 15.3917 8.8864
Cold stimulation 41.7227 10.6256 6.1347
Scratched surface 66.011 6.7146 3.8767
Ca2+, 200mM, 24h 23.0588 3.588 2.0715
Cu2+, 2mM, 6h 56.7787 5.4018 3.1187
Voriconazole 35.4295 7.5254 4.3448
Trichoderma interaction, early 60.4112 13.5654 7.832
Trichoderma interaction 60h 39.3825 21.3506 12.3268
Cobalt chloride 2mM repeat 44.0939 12.3118 7.1082
Hypoxia 23.542 8.1107 4.6827
Hypoxia control 27.1582 5.4891 3.1691
Protoplastation control 26.5084 2.603 1.8406
Protoplastation 3.5h 12.4038 5.2137 3.6867
Protoplastation 1.5h 14.9176 5.8225 4.1172

General data

Systematic name BUB1
Protein id CopciAB_538972.T0
Description Mad3/BUB1 hoMad3/BUB1 homology region 1

Annotation summary

0 300 600 900 1192

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd13981 STKc_Bub1_BubR1 - 852 1187
Pfam PF08311 Mad3/BUB1 homology region 1 IPR013212 15 139
Pfam PF08171 Mad3/BUB1 homology region 2 IPR012572 213 253
Pfam PF00069 Protein kinase domain IPR000719 893 1104

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR000719 Protein kinase domain
IPR013212 Mad3/Bub1 homology region 1
IPR008271 Serine/threonine-protein kinase, active site
IPR015661 Mitotic spindle checkpoint protein Bub1/Mad3
IPR012572 Mad3/Bub1 homology region 2
IPR011009 Protein kinase-like domain superfamily

GO

Go id Term Ontology
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP
GO:0007094 mitotic spindle assembly checkpoint BP

KEGG

KEGG Orthology
K02178
K06680

EggNOG

COG category Description
D Mad3/BUB1 hoMad3/BUB1 homology region 1

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_538972 across fungi.

Arrow shows the origin of gene family containing CopciAB_538972.

Protein

Sequence id CopciAB_538972.T0
Sequence >CopciAB_538972.T0
MSSSTLSAADRERYREKYRKKLAKALTEDDDPLATYNQFVQWTVKHYGEKDRSSGLLELLKDATNQFKDDPMYKN
DLRYLKMWALYARQLERSQAAKIYAFLVEKEIGTTYSALYEDYANLLEREGRRSEAEKIYLQGIEKQVRPLERLK
TRYKEFQARASQAAAQSNRSIPSGSRSASLASIASAPSTTSANLVSFNSTAASRYALMLAPTPPGKRPEKLKFNM
GLLWTDDGVEYSIQEARARSMGLLGKKWGPPPPSELPYYASLAASSSSTTPVDFNDDNMKSTRTMGMRRRSMLGG
AEPTVTINTKEALADVFGMYNSPEKTHKFTPGSKHAPLKKIEPATPMVIPKPTFSNENENAKTPSLSFRPFVDEN
AKTPSLSFRPFVDENAQSKMTTPAPSKLNVFVDEQNKTPFITPRSAFGLKDTTTPSLTQPRNENAPRSAFKPLST
LSEESADKPVFSKVFNPPQTDVPLAPLRDVFTDDHGKPVPKPKAMHTHERAKSHDIGADSKSPAFTPFVDENAKT
PFKVFSLPGTNDENALGRANPFTPKTPTPAVFTPFVDPKPEPAFTPFGSSTNRAFTPFADKTPAQSTAFKPEPEP
EPEHEAYEEEHQQAYEEEEVYAQEEEYSYDEEHIEQYQAPLAPEHIQEGYDEGSSYHHEAPLGGRFGQFSVMTPI
AERTCEFTTSTRGGTTPSDRYGRPQDGEGSPKSKHAPFLRDELVAARDARRLEAELQDDTSEELMQGRDEGEDEE
AYGEDQGGLQLEERTGALSLVDTLTLNSKFRPPNPCNPFDPPIMSTLLSRVQTDSHFYDLREYSSQKLDQLQKFF
KKGGRKNSTTVTDLFPLTLENNRFMLSEKLGEGGFGSVYKARDLGMRTGDDDDDDDDDDFDDFDDDEENASMVAI
KVVKPRNLWEYHALRRLHSALPANLRRSLVLPHGLYAYGDESFLILDLCTQGMLLDIVNNAASAGISQAGACLDE
LLVIFFTIELLRLVEGMHSAGFIHGDLKIDNCLLRLEDVPGGAAAWSSLYQPSGEGGWQYKGLKVIDFGRTIDTR
LFPADQQFIAEWPTDERDCFEIREGRPWTYQTDYFGLAGIIYCMLFGKYITSSAVVQVQGQHGETRYKIGTPLKR
YWQADLWNRLFDILLNPTLIRPGGELPLPKELAGVRVDMEAWLQANCNRTSNTLKGLLKKVEMSCYR
Length 1192

Coding

Sequence id CopciAB_538972.T0
Sequence >CopciAB_538972.T0
ATGTCCTCCTCAACCCTAAGCGCAGCAGACCGCGAACGATATCGCGAGAAATATCGTAAAAAGCTCGCTAAAGCA
CTGACCGAAGACGACGATCCACTGGCAACCTACAACCAATTTGTGCAATGGACCGTGAAGCATTATGGGGAGAAG
GACAGAAGCAGCGGCTTGCTGGAGCTGTTGAAAGATGCGACGAACCAATTCAAGGACGACCCGATGTACAAGAAC
GATCTGAGGTATTTGAAGATGTGGGCTTTGTATGCGAGGCAGCTGGAGAGGTCCCAGGCAGCGAAGATTTATGCA
TTTTTGGTGGAGAAGGAGATTGGAACAACGTATAGTGCTCTATACGAGGACTATGCAAATCTGTTGGAGAGGGAA
GGAAGACGGAGTGAGGCAGAGAAGATCTATCTGCAGGGAATCGAGAAGCAGGTTAGGCCCCTGGAACGTCTCAAG
ACGAGATATAAAGAGTTCCAGGCCAGGGCAAGTCAGGCAGCTGCACAAAGTAACAGGTCGATACCCTCTGGGAGC
CGGTCAGCATCTCTCGCCTCGATTGCTTCGGCACCTTCAACAACCTCTGCAAATCTCGTTTCCTTCAACTCGACT
GCTGCCTCTCGATATGCTCTTATGCTCGCCCCAACGCCTCCGGGAAAACGACCAGAGAAGTTAAAGTTTAACATG
GGGCTACTGTGGACAGACGATGGAGTGGAATACAGTATACAAGAAGCCCGAGCGCGATCTATGGGTCTCTTGGGC
AAGAAATGGGGTCCTCCACCACCATCCGAACTTCCCTACTACGCATCGCTGGCAGCATCATCTTCATCTACCACT
CCCGTCGACTTCAACGACGATAATATGAAATCGACCAGGACTATGGGCATGCGGAGGAGGAGTATGCTTGGTGGT
GCTGAGCCGACTGTCACGATCAATACCAAAGAGGCATTGGCGGATGTGTTTGGCATGTACAACTCCCCGGAGAAG
ACCCACAAGTTTACGCCAGGAAGTAAGCATGCGCCATTGAAGAAAATCGAACCTGCTACTCCCATGGTCATCCCC
AAACCGACCTTCTCCAATGAGAATGAGAACGCGAAGACGCCGAGTTTGTCCTTCCGACCCTTCGTTGACGAGAAT
GCGAAGACGCCCAGTTTGTCCTTCCGGCCATTTGTCGATGAGAATGCTCAGAGCAAGATGACAACGCCAGCTCCT
TCGAAGCTCAATGTCTTCGTCGACGAACAGAACAAGACGCCATTCATCACGCCTCGGAGCGCTTTTGGTCTCAAG
GATACTACGACTCCTTCACTCACGCAACCACGGAACGAGAACGCGCCTCGTAGCGCCTTCAAGCCGCTATCAACA
CTCTCTGAAGAATCTGCGGACAAGCCCGTCTTTAGCAAAGTATTTAACCCTCCACAAACAGACGTTCCATTGGCG
CCTCTTCGCGACGTTTTCACCGATGATCATGGCAAACCCGTCCCCAAACCCAAGGCTATGCACACCCATGAGCGG
GCCAAGTCTCATGATATTGGAGCGGATTCCAAAAGCCCAGCGTTCACGCCATTCGTGGATGAGAACGCGAAGACT
CCGTTCAAAGTCTTCAGCCTACCCGGCACCAACGACGAGAATGCCCTAGGAAGAGCCAACCCCTTCACTCCCAAA
ACCCCCACCCCTGCCGTTTTCACCCCCTTTGTCGATCCCAAACCTGAACCTGCTTTCACCCCCTTTGGATCCTCC
ACCAATCGAGCCTTCACACCCTTCGCTGACAAGACTCCTGCTCAATCCACTGCCTTCAAGCCTGAGCCCGAGCCG
GAACCCGAACACGAAGCATATGAGGAGGAGCATCAACAAGCTTACGAGGAGGAGGAGGTATATGCGCAGGAAGAG
GAATACAGCTATGACGAGGAGCATATCGAGCAATACCAGGCACCTCTCGCGCCCGAACACATCCAAGAGGGATAC
GACGAAGGGTCCTCGTACCATCATGAAGCTCCTCTCGGTGGGCGCTTCGGGCAATTCAGTGTCATGACGCCCATA
GCGGAACGGACATGCGAATTTACGACGAGCACACGCGGAGGCACAACGCCAAGTGACCGATATGGTCGACCTCAA
GATGGGGAGGGCTCACCAAAGAGCAAACATGCACCATTCTTGCGAGACGAGTTGGTTGCCGCTCGGGATGCCAGG
CGACTGGAAGCTGAACTTCAGGATGACACGAGCGAAGAGTTGATGCAAGGGCGCGACGAAGGGGAGGACGAAGAG
GCCTATGGTGAAGACCAGGGTGGACTGCAACTAGAAGAACGGACAGGTGCACTCAGTCTCGTCGACACTCTCACT
CTCAATTCGAAATTCCGGCCACCAAATCCCTGCAACCCATTCGATCCTCCCATCATGTCCACCCTCTTATCTCGT
GTCCAAACAGATTCCCATTTCTACGACCTCCGTGAATATTCATCTCAGAAACTGGACCAGCTTCAAAAGTTCTTC
AAGAAAGGGGGCAGGAAGAATAGTACGACTGTGACCGACCTCTTCCCACTTACTCTGGAAAACAATCGGTTTATG
TTGTCCGAAAAGCTGGGTGAAGGAGGCTTTGGATCCGTGTACAAGGCTCGGGATCTTGGAATGAGGACAGGGGAT
GATGATGATGACGACGACGATGACGATTTTGACGACTTTGACGACGACGAAGAGAACGCATCCATGGTGGCCATC
AAGGTGGTCAAGCCTCGCAATCTTTGGGAATACCACGCACTACGCCGCCTCCACTCGGCACTTCCAGCGAACCTA
CGGAGATCTCTGGTTCTTCCGCACGGACTTTATGCCTATGGAGATGAGAGCTTCCTCATCCTCGATCTCTGCACC
CAGGGCATGCTTCTTGACATCGTCAACAACGCCGCTTCAGCCGGTATTTCTCAAGCAGGAGCCTGCCTCGACGAA
CTCCTCGTTATCTTCTTCACTATCGAACTACTACGTTTGGTTGAAGGAATGCACAGCGCCGGGTTCATCCACGGA
GATCTCAAGATCGACAACTGTTTGTTGCGACTGGAGGATGTACCTGGAGGAGCAGCAGCGTGGTCTTCATTGTAT
CAGCCGTCGGGAGAAGGGGGCTGGCAATACAAGGGTCTCAAGGTGATCGACTTCGGTCGAACTATCGACACCAGG
CTCTTCCCAGCGGATCAACAGTTCATCGCAGAATGGCCGACGGACGAACGAGATTGTTTCGAGATCCGAGAGGGC
AGGCCATGGACGTACCAAACGGACTACTTTGGTTTGGCCGGAATTATTTACTGCATGCTGTTTGGGAAGTATATC
ACCTCCAGCGCAGTCGTGCAGGTCCAGGGCCAACATGGGGAGACGCGCTACAAGATTGGGACACCGTTGAAACGG
TATTGGCAGGCGGACCTTTGGAATCGGTTGTTTGACATTTTGTTGAACCCGACTCTAATTAGACCGGGTGGGGAG
CTGCCACTTCCAAAGGAGTTGGCGGGTGTCAGGGTAGATATGGAGGCGTGGTTGCAGGCTAATTGCAATAGGACG
AGCAATACTTTGAAAGGATTGCTGAAGAAGGTGGAAATGTCGTGTTACCGATGA
Length 3579

Transcript

Sequence id CopciAB_538972.T0
Sequence >CopciAB_538972.T0
AGCGATGCTTGCCCCGAACCTCGTTCAGCCTCAAGGACCCAACGCCCGCCAACTTCAAGCTTGATGCGCCAGCCA
TGTCCTCCTCAACCCTAAGCGCAGCAGACCGCGAACGATATCGCGAGAAATATCGTAAAAAGCTCGCTAAAGCAC
TGACCGAAGACGACGATCCACTGGCAACCTACAACCAATTTGTGCAATGGACCGTGAAGCATTATGGGGAGAAGG
ACAGAAGCAGCGGCTTGCTGGAGCTGTTGAAAGATGCGACGAACCAATTCAAGGACGACCCGATGTACAAGAACG
ATCTGAGGTATTTGAAGATGTGGGCTTTGTATGCGAGGCAGCTGGAGAGGTCCCAGGCAGCGAAGATTTATGCAT
TTTTGGTGGAGAAGGAGATTGGAACAACGTATAGTGCTCTATACGAGGACTATGCAAATCTGTTGGAGAGGGAAG
GAAGACGGAGTGAGGCAGAGAAGATCTATCTGCAGGGAATCGAGAAGCAGGTTAGGCCCCTGGAACGTCTCAAGA
CGAGATATAAAGAGTTCCAGGCCAGGGCAAGTCAGGCAGCTGCACAAAGTAACAGGTCGATACCCTCTGGGAGCC
GGTCAGCATCTCTCGCCTCGATTGCTTCGGCACCTTCAACAACCTCTGCAAATCTCGTTTCCTTCAACTCGACTG
CTGCCTCTCGATATGCTCTTATGCTCGCCCCAACGCCTCCGGGAAAACGACCAGAGAAGTTAAAGTTTAACATGG
GGCTACTGTGGACAGACGATGGAGTGGAATACAGTATACAAGAAGCCCGAGCGCGATCTATGGGTCTCTTGGGCA
AGAAATGGGGTCCTCCACCACCATCCGAACTTCCCTACTACGCATCGCTGGCAGCATCATCTTCATCTACCACTC
CCGTCGACTTCAACGACGATAATATGAAATCGACCAGGACTATGGGCATGCGGAGGAGGAGTATGCTTGGTGGTG
CTGAGCCGACTGTCACGATCAATACCAAAGAGGCATTGGCGGATGTGTTTGGCATGTACAACTCCCCGGAGAAGA
CCCACAAGTTTACGCCAGGAAGTAAGCATGCGCCATTGAAGAAAATCGAACCTGCTACTCCCATGGTCATCCCCA
AACCGACCTTCTCCAATGAGAATGAGAACGCGAAGACGCCGAGTTTGTCCTTCCGACCCTTCGTTGACGAGAATG
CGAAGACGCCCAGTTTGTCCTTCCGGCCATTTGTCGATGAGAATGCTCAGAGCAAGATGACAACGCCAGCTCCTT
CGAAGCTCAATGTCTTCGTCGACGAACAGAACAAGACGCCATTCATCACGCCTCGGAGCGCTTTTGGTCTCAAGG
ATACTACGACTCCTTCACTCACGCAACCACGGAACGAGAACGCGCCTCGTAGCGCCTTCAAGCCGCTATCAACAC
TCTCTGAAGAATCTGCGGACAAGCCCGTCTTTAGCAAAGTATTTAACCCTCCACAAACAGACGTTCCATTGGCGC
CTCTTCGCGACGTTTTCACCGATGATCATGGCAAACCCGTCCCCAAACCCAAGGCTATGCACACCCATGAGCGGG
CCAAGTCTCATGATATTGGAGCGGATTCCAAAAGCCCAGCGTTCACGCCATTCGTGGATGAGAACGCGAAGACTC
CGTTCAAAGTCTTCAGCCTACCCGGCACCAACGACGAGAATGCCCTAGGAAGAGCCAACCCCTTCACTCCCAAAA
CCCCCACCCCTGCCGTTTTCACCCCCTTTGTCGATCCCAAACCTGAACCTGCTTTCACCCCCTTTGGATCCTCCA
CCAATCGAGCCTTCACACCCTTCGCTGACAAGACTCCTGCTCAATCCACTGCCTTCAAGCCTGAGCCCGAGCCGG
AACCCGAACACGAAGCATATGAGGAGGAGCATCAACAAGCTTACGAGGAGGAGGAGGTATATGCGCAGGAAGAGG
AATACAGCTATGACGAGGAGCATATCGAGCAATACCAGGCACCTCTCGCGCCCGAACACATCCAAGAGGGATACG
ACGAAGGGTCCTCGTACCATCATGAAGCTCCTCTCGGTGGGCGCTTCGGGCAATTCAGTGTCATGACGCCCATAG
CGGAACGGACATGCGAATTTACGACGAGCACACGCGGAGGCACAACGCCAAGTGACCGATATGGTCGACCTCAAG
ATGGGGAGGGCTCACCAAAGAGCAAACATGCACCATTCTTGCGAGACGAGTTGGTTGCCGCTCGGGATGCCAGGC
GACTGGAAGCTGAACTTCAGGATGACACGAGCGAAGAGTTGATGCAAGGGCGCGACGAAGGGGAGGACGAAGAGG
CCTATGGTGAAGACCAGGGTGGACTGCAACTAGAAGAACGGACAGGTGCACTCAGTCTCGTCGACACTCTCACTC
TCAATTCGAAATTCCGGCCACCAAATCCCTGCAACCCATTCGATCCTCCCATCATGTCCACCCTCTTATCTCGTG
TCCAAACAGATTCCCATTTCTACGACCTCCGTGAATATTCATCTCAGAAACTGGACCAGCTTCAAAAGTTCTTCA
AGAAAGGGGGCAGGAAGAATAGTACGACTGTGACCGACCTCTTCCCACTTACTCTGGAAAACAATCGGTTTATGT
TGTCCGAAAAGCTGGGTGAAGGAGGCTTTGGATCCGTGTACAAGGCTCGGGATCTTGGAATGAGGACAGGGGATG
ATGATGATGACGACGACGATGACGATTTTGACGACTTTGACGACGACGAAGAGAACGCATCCATGGTGGCCATCA
AGGTGGTCAAGCCTCGCAATCTTTGGGAATACCACGCACTACGCCGCCTCCACTCGGCACTTCCAGCGAACCTAC
GGAGATCTCTGGTTCTTCCGCACGGACTTTATGCCTATGGAGATGAGAGCTTCCTCATCCTCGATCTCTGCACCC
AGGGCATGCTTCTTGACATCGTCAACAACGCCGCTTCAGCCGGTATTTCTCAAGCAGGAGCCTGCCTCGACGAAC
TCCTCGTTATCTTCTTCACTATCGAACTACTACGTTTGGTTGAAGGAATGCACAGCGCCGGGTTCATCCACGGAG
ATCTCAAGATCGACAACTGTTTGTTGCGACTGGAGGATGTACCTGGAGGAGCAGCAGCGTGGTCTTCATTGTATC
AGCCGTCGGGAGAAGGGGGCTGGCAATACAAGGGTCTCAAGGTGATCGACTTCGGTCGAACTATCGACACCAGGC
TCTTCCCAGCGGATCAACAGTTCATCGCAGAATGGCCGACGGACGAACGAGATTGTTTCGAGATCCGAGAGGGCA
GGCCATGGACGTACCAAACGGACTACTTTGGTTTGGCCGGAATTATTTACTGCATGCTGTTTGGGAAGTATATCA
CCTCCAGCGCAGTCGTGCAGGTCCAGGGCCAACATGGGGAGACGCGCTACAAGATTGGGACACCGTTGAAACGGT
ATTGGCAGGCGGACCTTTGGAATCGGTTGTTTGACATTTTGTTGAACCCGACTCTAATTAGACCGGGTGGGGAGC
TGCCACTTCCAAAGGAGTTGGCGGGTGTCAGGGTAGATATGGAGGCGTGGTTGCAGGCTAATTGCAATAGGACGA
GCAATACTTTGAAAGGATTGCTGAAGAAGGTGGAAATGTCGTGTTACCGATGAGGACTCTATAGACGCTTAACCA
ATGATTCCGGCTTGCTTACTGTATTCAGGATATAGTGCTTTATATCGACCGTTTTATTATTCCTTCA
Length 3742

Gene

Sequence id CopciAB_538972.T0
Sequence >CopciAB_538972.T0
AGCGATGCTTGCCCCGAACCTCGTTCAGCCTCAAGGACCCAACGCCCGCCAACTTCAAGCTTGATGCGCCAGCCA
TGTCCTCCTCAACCCTAAGCGCAGCAGACCGCGAACGATATCGCGAGAAATATCGTAAAAAGCTCGCTAAAGCAC
TGACCGAAGACGACGATCCACTGGCAACCTACAACCAATTTGTGCAATGGACCGTGAAGCATTATGGGGAGAAGG
ACAGAAGCAGCGGCTTGCTGGAGCTGTTGAAAGATGCGACGAACCAATTCAAGGACGACCCGATGTACAAGAACG
ATCTGAGGTATTTGAAGATGTGGGCTTTGTATGCGAGGCAGCTGGAGAGGTCCCAGGCAGCGAAGATTTATGCAT
TTTTGGTGGAGAAGGAGATTGGAACAACGTATAGTGCTCTATACGAGGACTATGCAAATCTGTTGGAGAGGGAAG
GAAGGTACGTATATCCGTCTTCTTTTGTAAGCGTGAATTGTGACTTAGGTTCTCTGGATGGCATTTGTAGACGGA
GTGAGGCAGAGAAGATCTATCTGCAGGGAATCGAGAAGCAGGTTAGGCCCCTGGAACGTCTCAAGACGAGATATA
AAGAGTTCCAGGCCAGGGCAAGTCAGGCAGCTGCACAAAGTAACAGGTCGATACCCTCTGGGAGCCGGTCAGCAT
CTCTCGCCTCGATTGCTTCGGCACCTTCAACAACCTCTGCAAATCTCGTTTCCTTCAACTCGACTGCTGCCTCTC
GATATGCTCTTATGCTCGCCCCAACGCCTCCGGGAAAACGACCAGAGAAGTTAAAGTTTAACATGGGGCTACTGT
GGACAGACGATGGAGTGGAATACAGTATACAAGAAGCCCGAGCGCGATCTATGGGTCTCTTGGGCAAGAAATGGG
GTCCTCCACCACCATCCGAACTTCCCTACTACGCATCGCTGGCAGCATCATCTTCATCTACCACTCCCGTCGACT
TCAACGACGATAATATGAAATCGACCAGGACTATGGGCATGCGGAGGAGGAGTATGCTTGGTGGTGCTGAGCCGA
CTGTCACGATCAATACCAAAGAGGCATTGGCGGATGTGTTTGGCATGTACAACTCCCCGGAGAAGACCCACAAGT
TTACGCCAGGAAGTAAGCATGCGCCATTGAAGAAAATCGAACCTGCTACTCCCATGGTCATCCCCAAACCGACCT
TCTCCAATGAGAATGAGAACGCGAAGACGCCGAGTTTGTGTAAGCATTTACCTACTGCTGTTCAATGCGAGCTTG
AGCTGATCTGAGAACTAGCCTTCCGACCCTTCGTTGACGAGAATGCGAAGACGCCCAGTTTGTGTAAGTGCTATC
ATCTGTTCCTTGATGTACTTCCAAGCTAATCTGGGGTAATTAGCCTTCCGGCCATTTGTCGATGAGAATGCTCAG
AGCAAGATGACAACGCCAGCTCCTTCGAAGGTATGCATCCAATTCAAGAGTTTAGCCTTCCTGTCTGATGTTCAC
CCTCAAGCTCAATGTCTTCGTCGACGAACAGAACAAGACGCCATTCATCACGCCTCGGAGCGCTTTTGGTCTCAA
GGATACTACGACTCCTTCACTCACGCAACCACGGAACGAGAACGCGCCTCGTAGCGCCTTCAAGCCGCTATCAAC
ACTCTCTGAAGAATCTGCGGACAAGCCCGTCTTTAGCAAAGTATTTAACCCTCCACAAACAGACGTTCCATTGGC
GCCTCTTCGCGACGTTTTCACCGATGATCATGGCAAACCCGTCCCCAAACCCAAGGCTATGCACACCCATGAGCG
GGCCAAGTCTCATGATATTGGAGCGGATTCCAAAAGCCCAGCGTTCACGCCATTCGTGGATGAGAACGCGAAGAC
TCCGTTCAAAGTCTTCAGCCTACCCGGCACCAACGACGAGAATGCCCTAGGAAGAGCCAACCCCTTCACTCCCAA
AACCCCCACCCCTGCCGTTTTCACCCCCTTTGTCGATCCCAAACCTGAACCTGCTTTCACCCCCTTTGGATCCTC
CACCAATCGAGCCTTCACACCCTTCGCTGACAAGACTCCTGCTCAATCCACTGCCTTCAAGCCTGAGCCCGAGCC
GGAACCCGAACACGAAGCATATGAGGAGGAGCATCAACAAGCTTACGAGGAGGAGGAGGTATATGCGCAGGAAGA
GGAATACAGCTATGACGAGGAGCATATCGAGCAATACCAGGCACCTCTCGCGCCCGAACACATCCAAGAGGGATA
CGACGAAGGGTCCTCGTACCATCATGAAGCTCCTCTCGGTGGGCGCTTCGGGCAATTCAGTGTCATGACGCCCAT
AGCGGAACGGACATGCGAATTTACGACGAGCACACGCGGAGGCACAACGCCAAGTGACCGATATGGTCGACCTCA
AGATGGGGAGGGCTCACCAAAGAGCAAACATGCACCATTCTTGCGAGACGAGTTGGTTGCCGCTCGGGATGCCAG
GCGACTGGAAGCTGAACTTCAGGATGACACGAGCGAAGAGTTGATGCAAGGGCGCGACGAAGGGGAGGACGAAGA
GGCCTATGGTGAAGACCAGGGTGGACTGCAACTAGAAGAACGGACAGGTGCACTCAGTCTCGTCGACACTCTCAC
TCTCAATTCGAAATTCCGGCCACCAAATCCCTGCAACCCATTCGATCCTCCCATCATGTCCACCCTCTTATCTCG
TGTCCAAACAGATTCCCATTTCTACGACCTCCGTGAATATTCATCTCAGAAACTGGACCAGCTTCAAAAGTTCTT
CAAGAAAGGGGGCAGGAAGAATAGTACGACTGTGACCGACCTCTTCCCACTTACTCTGGAAAACAATCGGTTTAT
GTTGTCCGAAAAGCTGGGTGAAGGAGGCTTTGGATCCGTGTACAAGGCTCGGGATCTTGGAATGAGGACAGGGGA
TGATGATGATGACGACGACGATGACGATTTTGACGACTTTGACGACGACGAAGAGAACGCATCCATGGTGGCCAT
CAAGGTGGTCAAGCCTCGCAATCTTTGGGAATACCACGCACTACGCCGCCTCCACTCGGCACTTCCAGCGAACCT
ACGGAGATCTCTGGTTCTTCCGCACGGACTTTATGCCTATGGAGATGAGAGCTTCCTCATCCTCGATCTCTGCAC
CCAGGGCATGCTTCTTGACATCGTCAACAACGCCGCTTCAGCCGGTATTTCTCAAGCAGGAGCCTGCCTCGACGA
ACTCCTCGTTATCTTCTTCACTATCGAACTACTACGTTTGGTTGAAGGAATGCACAGCGCCGGGTTCATCCACGG
AGATCTCAAGATCGACAACTGTTTGTTGCGACTGGAGGATGTACCTGGAGGAGCAGCAGCGTGGTCTTCATTGTA
TCAGCCGTCGGGAGAAGGGGGCTGGCAATACAAGGGTCTCAAGGTGATCGACTTCGGTCGAACTATCGACACCAG
GCTCTTCCCAGCGGATCAACAGTTCATCGCAGAATGGCCGACGGACGAACGAGATTGTTTCGAGATCCGAGAGGG
CAGGCCATGGACGTACCAAACGGACTACTTTGGTTTGGCCGGAATTATTTACTGCATGCTGTTTGGGAAGTATAT
CACCTCCAGCGCAGTCGTGCAGGTCCAGGGCCAACATGGGGAGACGCGCTACAAGATTGGGACACCGTTGAAACG
GTATTGGCAGGCGGACCTTTGGAATCGGTTGTTTGACATTTTGTTGAACCCGACTCTAATTAGACCGGGTGGGGA
GCTGCCACTTCCAAAGGAGTTGGCGGGTGTCAGGGTAGATATGGAGGCGTGGTTGCAGGCTAATTGCAATAGGAC
GAGCAATACTTTGAAAGGATTGCTGAAGAAGGTGGAAATGTCGTGTTACCGATGAGGACTCTATAGACGCTTAAC
CAATGATTCCGGCTTGCTTACTGTATTCAGGATATAGTGCTTTATATCGACCGTTTTATTATTCCTTCA
Length 3969