Systematic name | CopciAB_542315 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 542315 |
Uniprot id | Functional description | Aryl-alcohol oxidase | |
Location | scaffold_6:2497385..2500196 | Strand | - |
Gene length (nt) | 2812 | Transcript length (nt) | 1977 |
CDS length (nt) | 1782 | Protein length (aa) | 593 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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0 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_542315.T0 |
Description | Aryl-alcohol oxidase |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 43 | 355 |
Pfam | PF05199 | GMC oxidoreductase | IPR007867 | 448 | 584 |
Prediction | Start | End | Score |
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SP(Sec/SPI) | 1 | 19 | 0.9826 |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal |
IPR012132 | Glucose-methanol-choline oxidoreductase |
IPR036188 | FAD/NAD(P)-binding domain superfamily |
IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
Go id | Term | Ontology |
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GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
GO:0050660 | flavin adenine dinucleotide binding | MF |
KEGG Orthology |
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K00108 |
K20154 |
COG category | Description |
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E | Aryl-alcohol oxidase |
Class | Family | Subfamily |
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AA | AA3 | AA3_2 |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_542315.
Sequence id | CopciAB_542315.T0 |
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Sequence |
>CopciAB_542315.T0 MNRVIAWGTLAILLLGAQSDSGFQVRAEVLHSVDDLKADGEKFDFIIAGGGTAGSIVASRLSENPNFKVLLVEAG PNNEDILELTVPGCSSRVNGLVSNGSRYTWNFTTVSQVMLNDHELPIVRGRVLGGSSSISGMQYVRGSSDDYDAW AKATGDRGWSWKGAWPYFKKNERWMAPNSGRNIIGQYDPRVHGYGGQAPVGLPNSEPSDFAMRCVKNTKWKPDYF PFTLDVNSGRPRGVAWAQFTVGNGERASAATAYMGSEVRKRPNLTILLNTHFTRVLPVIGSTRGLEVRTLEIVSG SERKTITAKKELILSAGVYGTPHTLLNSGIGNKAQLRAVGVQVVHDLPDVGQGLREMPTVTLSWIANVTDPPPTD QAAALAEWQANRTGPLSEFVLGRVQSLWHRIPKDDDIWKKHEDPSSGPTTPHLELWLCGGMRNMSTWLLLNTPQS RGTVKLGSSDPLDPPVIDYGFLSHPSDREALKEGIRLAKKFFSGPVWDGYITSFLGPDPDVLSEVEFDAVVRDNL SGFSHAVGTSAMTRKGDKRGVVNPDLKVKGVKGLRIVDGSVVSVTAPPQAAVYVLAERASDLIQREWK |
Length | 593 |
Sequence id | CopciAB_542315.T0 |
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Sequence |
>CopciAB_542315.T0 ATGAATCGCGTTATCGCATGGGGCACTCTGGCTATTCTGCTCCTTGGAGCTCAATCCGACTCGGGCTTTCAGGTA CGGGCGGAGGTGCTTCACAGTGTGGACGATCTAAAGGCAGACGGGGAAAAGTTCGACTTTATCATTGCTGGAGGA GGAACAGCGGGCTCTATCGTCGCAAGCCGTCTATCTGAAAACCCCAATTTCAAAGTTTTATTGGTCGAGGCCGGG CCAAACAACGAGGACATACTCGAGCTAACTGTCCCGGGGTGCTCGAGCCGTGTCAATGGACTCGTCAGTAACGGA AGCCGATATACCTGGAATTTTACGACCGTTTCGCAAGTTATGCTCAACGATCATGAGTTGCCTATTGTACGAGGA CGTGTACTTGGTGGTTCGAGCTCGATCAGTGGAATGCAATATGTACGCGGGTCATCAGATGATTATGATGCGTGG GCGAAGGCGACGGGTGATCGTGGGTGGTCGTGGAAAGGAGCGTGGCCATACTTCAAAAAGAACGAGCGTTGGATG GCCCCCAACAGTGGTCGAAATATCATAGGCCAATACGATCCCCGAGTTCATGGCTATGGTGGACAAGCGCCCGTT GGCCTTCCCAACAGTGAACCTAGTGATTTCGCAATGCGATGCGTCAAGAACACAAAGTGGAAGCCCGACTATTTC CCATTTACCTTGGACGTCAACTCAGGGAGGCCTCGAGGAGTTGCATGGGCGCAGTTTACAGTGGGAAACGGAGAG AGAGCAAGTGCAGCAACTGCATACATGGGATCGGAAGTCAGGAAACGACCCAATTTGACCATCCTTCTCAACACC CATTTCACACGAGTCCTCCCTGTAATCGGGTCGACTCGAGGGCTGGAGGTTAGGACGCTCGAGATTGTATCCGGG AGCGAGCGTAAGACCATTACCGCGAAGAAAGAGCTCATTCTGTCAGCAGGGGTGTACGGGACACCTCATACCCTA CTCAACTCGGGGATCGGAAACAAGGCCCAACTTCGAGCAGTAGGAGTGCAAGTTGTTCATGACTTGCCTGATGTT GGGCAGGGCCTCCGGGAAATGCCCACTGTTACGCTATCCTGGATTGCAAATGTGACTGATCCTCCACCGACAGAC CAGGCGGCGGCTCTGGCTGAATGGCAGGCGAACCGGACTGGCCCGCTGTCAGAGTTCGTACTCGGGCGCGTGCAA AGCCTTTGGCATAGGATCCCAAAGGACGATGATATCTGGAAGAAACATGAAGATCCGTCGTCTGGACCTACTACG CCGCATCTTGAGCTTTGGCTGTGTGGAGGGATGCGCAATATGAGCACTTGGCTTCTACTTAATACTCCCCAGTCT CGCGGAACGGTCAAACTCGGATCGAGCGACCCACTCGATCCTCCCGTCATCGATTACGGATTCCTCAGCCATCCC TCCGACCGCGAGGCTCTTAAAGAGGGTATCCGACTAGCGAAGAAGTTTTTCAGTGGGCCTGTCTGGGACGGGTAT ATAACCAGCTTCCTCGGTCCCGACCCCGATGTGCTCTCAGAAGTGGAGTTCGACGCGGTCGTGAGGGACAATCTT AGTGGATTCTCGCACGCGGTTGGGACTTCTGCTATGACGAGAAAGGGGGACAAGAGGGGTGTAGTTAATCCCGAT TTAAAGGTGAAAGGGGTGAAGGGGTTGAGGATTGTAGATGGTTCTGTTGTTTCCGTAACAGCTCCTCCACAAGCG GCGGTATATGTTCTGGCGGAACGAGCTTCTGATCTCATACAGCGAGAGTGGAAGTGA |
Length | 1782 |
Sequence id | CopciAB_542315.T0 |
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Sequence |
>CopciAB_542315.T0 ATAAACAGCTCTCAGGGTCTTGGGATACTGGTACACATCTCACCAGCGCTGCCTGTGCGTGGTTCCTCTCACAGT ATGAATCGCGTTATCGCATGGGGCACTCTGGCTATTCTGCTCCTTGGAGCTCAATCCGACTCGGGCTTTCAGGTA CGGGCGGAGGTGCTTCACAGTGTGGACGATCTAAAGGCAGACGGGGAAAAGTTCGACTTTATCATTGCTGGAGGA GGAACAGCGGGCTCTATCGTCGCAAGCCGTCTATCTGAAAACCCCAATTTCAAAGTTTTATTGGTCGAGGCCGGG CCAAACAACGAGGACATACTCGAGCTAACTGTCCCGGGGTGCTCGAGCCGTGTCAATGGACTCGTCAGTAACGGA AGCCGATATACCTGGAATTTTACGACCGTTTCGCAAGTTATGCTCAACGATCATGAGTTGCCTATTGTACGAGGA CGTGTACTTGGTGGTTCGAGCTCGATCAGTGGAATGCAATATGTACGCGGGTCATCAGATGATTATGATGCGTGG GCGAAGGCGACGGGTGATCGTGGGTGGTCGTGGAAAGGAGCGTGGCCATACTTCAAAAAGAACGAGCGTTGGATG GCCCCCAACAGTGGTCGAAATATCATAGGCCAATACGATCCCCGAGTTCATGGCTATGGTGGACAAGCGCCCGTT GGCCTTCCCAACAGTGAACCTAGTGATTTCGCAATGCGATGCGTCAAGAACACAAAGTGGAAGCCCGACTATTTC CCATTTACCTTGGACGTCAACTCAGGGAGGCCTCGAGGAGTTGCATGGGCGCAGTTTACAGTGGGAAACGGAGAG AGAGCAAGTGCAGCAACTGCATACATGGGATCGGAAGTCAGGAAACGACCCAATTTGACCATCCTTCTCAACACC CATTTCACACGAGTCCTCCCTGTAATCGGGTCGACTCGAGGGCTGGAGGTTAGGACGCTCGAGATTGTATCCGGG AGCGAGCGTAAGACCATTACCGCGAAGAAAGAGCTCATTCTGTCAGCAGGGGTGTACGGGACACCTCATACCCTA CTCAACTCGGGGATCGGAAACAAGGCCCAACTTCGAGCAGTAGGAGTGCAAGTTGTTCATGACTTGCCTGATGTT GGGCAGGGCCTCCGGGAAATGCCCACTGTTACGCTATCCTGGATTGCAAATGTGACTGATCCTCCACCGACAGAC CAGGCGGCGGCTCTGGCTGAATGGCAGGCGAACCGGACTGGCCCGCTGTCAGAGTTCGTACTCGGGCGCGTGCAA AGCCTTTGGCATAGGATCCCAAAGGACGATGATATCTGGAAGAAACATGAAGATCCGTCGTCTGGACCTACTACG CCGCATCTTGAGCTTTGGCTGTGTGGAGGGATGCGCAATATGAGCACTTGGCTTCTACTTAATACTCCCCAGTCT CGCGGAACGGTCAAACTCGGATCGAGCGACCCACTCGATCCTCCCGTCATCGATTACGGATTCCTCAGCCATCCC TCCGACCGCGAGGCTCTTAAAGAGGGTATCCGACTAGCGAAGAAGTTTTTCAGTGGGCCTGTCTGGGACGGGTAT ATAACCAGCTTCCTCGGTCCCGACCCCGATGTGCTCTCAGAAGTGGAGTTCGACGCGGTCGTGAGGGACAATCTT AGTGGATTCTCGCACGCGGTTGGGACTTCTGCTATGACGAGAAAGGGGGACAAGAGGGGTGTAGTTAATCCCGAT TTAAAGGTGAAAGGGGTGAAGGGGTTGAGGATTGTAGATGGTTCTGTTGTTTCCGTAACAGCTCCTCCACAAGCG GCGGTATATGTTCTGGCGGAACGAGCTTCTGATCTCATACAGCGAGAGTGGAAGTGATCGCATGCGTAGCTGCAT GTTGTCTGAAGGTTTCTGTTTCTTCATTTCATCTTGTTTGACTCGTACAGTAATAAAACCATCTATCAATGAATA TCGGAAAATACAGCTATCTGGATAGAA |
Length | 1977 |
Sequence id | CopciAB_542315.T0 |
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Sequence |
>CopciAB_542315.T0 ATAAACAGCTCTCAGGGTCTTGGGATACTGGTACACATCTCACCAGCGCTGCCTGTGCGTGGTTCCTCTCACAGT ATGAATCGCGTTATCGCATGGGGCACTCTGGCTATTCTGCTCCTTGGAGCTCAATCCGACTCGGGCTTTCAGGTA CGGGCGGAGGTGCTTCACAGTGTGGACGATCTAAAGGCAGACGGGGAAAAGTTCGACTTTATCATTGCTGGAGGT GAGTCGAATGCTTAGTTACATCTGATGGCGGGCCACAATTGACCAACTGCTGGCATATCTTTGCGAATCGCTTAC CCGTTGATTAATAGGAGGAACAGCGGGCTCTATCGTCGCAAGCCGTCTATCTGAAAACCCCAATTTCAAAGTTTT ATTGGTCGAGGCCGGGCCAAAGTCAGTATCTTTCTTACACTTTCCCAAGTTACATCTTTTTCCAATATTCAGACA ATGGGCAATGGGACTGACGTCCGACCGTCCGCTGGGTTTTCGCTGACGCACACCTGCAGCAACGAGGACATACTC GAGCTAACTGTCCCGGGGTGCTCGAGCCGTGTCAATGGACTCGTCAGTAACGGAAGCCGATATACCTGGAATTTT ACGACCGTTTCGCAAGTTATGCTCAACGATCATGAGTTGCCTATTGTACGAGGACGTGTACTTGGTGGTTCGAGC TCGATCAGTGAGTCTCGCCTTGCCTGGCACTGTGCGCAGCAGTCGAAAAGGCTCACAATTTAAATACGACCGGTT AGGTGGAATGCAATATGTACGCGGGTCATCAGATGATTATGATGCGTGGGCGAAGGCGACGGGTGATCGTGGGTG GTCGTGGAAAGGAGCGTGGCCATACTTCAAAAAGGTGAGGAGTAGGGGCTCTTTTAAGTGTGACTTGATCCATCT TCAAAGCGACGTGCTTCAGCCTTCCTTTTTCCAAGTCCCCAAGTTGTGTGATCGACTTGCTAACACGCCCCACTC CATCAGAACGAGCGTTGGATGGCCCCCAACAGTGGTCGAAATATCATAGGCCAATACGATCCCCGAGTTCATGGC TATGGTGGACAAGCGCCCGTTGGCCTTCCCAACAGTGAACCTAGTGATTTCGCAATGCGATGCGTCAAGAACACA AAGTGGAAGCCCGACTATTTCCCATTTACCTTGGACGTCAACTCAGGGAGGCCTCGAGGAGTTGGTAAGTCAACT ATTTATGTATTTATCCTAGTCGCTCTCTTGAGTGAGCAAAGTTCCAACTCAAGTACTCCTTTGGCAGCATGGGCG CAGTTTACAGTGGGAAACGGAGAGAGAGCAAGTGCAGCAACTGCATACATGGGATCGGAAGTCAGGAAACGACCC AATTTGACCATCCTTCTCAACACCCATTTCACACGAGTCCTCCCTGTAATCGGGTCGACTCGAGGGCTGGAGGTT AGGACGCTCGAGATTGTATCCGGGAGTGAGTGCAACGTTTCTAATACCGTTTACCCCAACCCGACTTGACCGACG ATTAACCTTGAATCTTAGGCGAGCGTAAGACCATTACCGCGAAGAAAGAGCTCATTCTGTCAGCAGGGGTGTACG GGACACCTCATACCCTACTCAACTCGGGGATCGGAAACAAGGCCCAACTTCGAGCAGTAGGAGTGCAAGTTGTTC ATGACTTGCCTGATGTTGGGCAGGGCCTCCGGGAAATGCCCACTGTTACGCTATCCTGGATTGCAAATGTGACTG ATCCTCCACCGTATGTCTCAATCTTCCTCCCTACCAGGTCAAAGCCTTCGCGGCAGTGCCAGTCTGGGCCCTTAT GGATGCTAATGATTACACTATTATAGGACAGACCAGGCGGCGGCTCTGGCTGAATGGCAGGCGAACCGGACTGGC CCGCTGTCAGAGTTCGTACTCGGGCGCGTGCAAAGCCTTTGGCATAGGATCCCAAAGGACGATGATATCTGGAAG AAACATGAAGATCCGTCGTCTGGACCTACTACGCCGCATCTTGAGCTTTGGCTGTGTGTACGTAAGGGCTCGTCT TTCCTTGCCAGCACCGGGTACATAACAACGTTTATGATATTTCAGGGAGGGATGCGCAATATGAGCACTTGGCTT CTACTTAATACTCCCCAGTCTCGTAAGTCCCCGACTGCTAGTTTTCTCAAAGCATGGAAAGACTCGCTGAGAATG ATGTTGTTTCCTAAACCCACAGGCGGAACGGTCAAACTCGGATCGAGCGACCCACTCGATCCTCCCGTCATCGAT TACGGATTCCTCAGCCATCCCTCCGACCGCGAGGCTCTTAAAGAGGGTATCCGACTAGCGAAGAAGTTTTTCAGT GGGCCTGTCTGGGACGGGTATATAACCAGCTTCCTCGGTCCCGACCCCGATGTGCTCTCAGAAGTGGAGTTCGAC GCGGTCGTGAGGGACAATCTTAGTGGATTCTCGCACGCGGTTGGGACTTCTGCTATGACGAGAAAGGGGGACAAG AGGGGTGTAGTTAATCCCGATTTAAAGGTGAAAGGGGTGAAGGGGTTGAGGATTGTAGATGGTTCTGTTGTTGTG AGTGTCTCTGATATGTCTGCGGGGATATAGATCATCTGGGTGCTTACCAAGGTATCTACAGTCCGTAACAGCTCC TCCACAAGCGGCGGTATATGTTCTGGCGGAACGAGCTTCTGATCTCATACAGCGAGAGTGGAAGTGATCGCATGC GTAGCTGCATGTTGTCTGAAGGTTTCTGTTTCTTCATTTCATCTTGTTTGACTCGTACAGTAATAAAACCATCTA TCAATGAATATCGGAAAATACAGCTATCTGGATAGAA |
Length | 2812 |