CopciAB_82537
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_82537 Strain Coprinopsis cinerea Okayama 7
Standard name - Synonyms 82537
Uniprot id Functional description A domain family that is part of the cupin metalloenzyme superfamily.
Location scaffold_2:1203425..1207794 Strand +
Gene length (nt) 4370 Transcript length (nt) 3839
CDS length (nt) 3681 Protein length (aa) 1226

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Hypsizygus marmoreus strain 51987-8 Hypma_RDB21419 35.5 2.19E-162 546
Flammulina velutipes Flave_chr10AA00376 39.3 3.827E-151 512
Lentinula edodes NBRC 111202 Lenedo1_1119963 31.5 1.516E-133 459
Lentinula edodes B17 Lened_B_1_1_1516 31.6 2.562E-133 458
Agrocybe aegerita Agrae_CAA7271539 50.4 3.018E-129 446
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_104482 37.6 2.01E-126 437
Lentinula edodes W1-26 v1.0 Lentinedodes1_8519 36.5 2.207E-122 425
Pleurotus eryngii ATCC 90797 Pleery1_1382146 45 9.211E-120 417
Grifola frondosa Grifr_OBZ75450 32.7 3.4E-117 409
Schizophyllum commune H4-8 Schco3_2481326 43.9 1.885E-116 407
Pleurotus ostreatus PC15 PleosPC15_2_1033321 46.6 1.239E-103 367
Ganoderma sp. 10597 SS1 v1.0 Gansp1_71657 51.4 2.005E-86 313
Pleurotus ostreatus PC9 PleosPC9_1_40735 62.5 5.183E-78 286
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_59519 59.4 3.358E-76 280
Auricularia subglabra Aurde3_1_1212512 26.4 7.35E-76 280

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 87.2479 5.2072 3.0064
oidia 46.9166 0.9323 0.5382
vegetative_mycelium 46.8854 4.9421 2.8533
primordia 66.2173 5.082 2.9341
hyphal_knot 73.0686 5.7184 3.3015
young_fruiting_body 28.7433 7.6795 4.4338
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 78.6054 0.6192 0.3575
Wheat bran 44.0649 7.909 4.5663
Horse manure 56.6156 14.0165 8.0924
Oak leaves 55.1294 19.788 11.4246
Hay 53.0298 8.5069 4.9115
Corn stalk 60.5047 4.9369 2.8503
Pectine 62.5943 5.6978 3.2896
Microcrystalline cellulose 68.9909 9.6551 5.5744
Xylose 56.4934 6.4462 3.7217
Cellobiose 73.6524 7.3474 4.242
Lignin 64.5198 9.8971 5.7141
Apple peels 71.8362 2.779 1.6045
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 51.957 1.5626 0.9021
Bsubtilis 55.9761 4.1976 2.4235
Ecoli 54.6178 2.8314 1.6347
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 37.1792 2.1297 1.2296
BS 4h 21.6321 3.0074 1.7363
BS 8h 13.3512 1.1222 0.6479
BS 12h 12.5324 0.5345 0.3086
Oidia 0 h 19.1527 1.0843 0.626
Oidia 18 h 14.933 2.0249 1.1691
Sclerotia 18.5369 5.2038 3.0044
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 14.9899 0.8768 0.5062
DM 36h 11.8119 0.9017 0.5206
DM 60h 11.7276 0.401 0.2315
DM 84h 10.8713 1.7912 1.0341
DM 108h 9.8108 0.4935 0.2849
DM 132h 11.7808 3.1374 1.8114
DM 156hAE 16.1635 0.916 0.5289
ELI1hAE 13.8425 3.0905 1.7843
ELI2hAE 11.3013 3.6188 2.0893
LI2hAE 10.3253 2.3808 1.3746
LI6hAE 12.0354 3.2646 1.8848
LI12hAE 12.1489 1.8107 1.0454
LI18hAE 11.7373 1.9716 1.1383
LI 24hAE 15.8841 1.0315 0.5955
DM 156hAM 11.288 1.7284 0.9979
ELI1hAM 12.8437 1.6145 0.9322
ELI2hAM 8.9216 1.3726 0.7925
LI2hAM 10.5036 0.7293 0.4211
LI6hAM 14.3641 3.0636 1.7688
LI12hAM 10.8983 1.1558 0.6673
LI18hAM 13.03 1.7941 1.0358
LI 24hAM 14.7947 4.0938 2.3636
LI 24hHK 12.618 2.3391 1.3505
L/D 6h 14.3078 3.4807 2.0096
L/D 12h 13.0744 1.3246 0.7648
L/D 18h 17.1959 2.0269 1.1702
L/D 24h 16.4986 2.1038 1.2146
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 37.1905 4.1107 2.3733
Hyphal knots 44.4699 1.5744 0.909
Primordium 1 39.5541 1.1691 0.675
Primordium 2 36.7481 6.5266 3.7681
Young Fruiting body cap 22.7846 9.7038 5.6025
Younf fruiting body gill 36.231 14.6028 8.4309
Young fruiting body stipe 34.8141 3.3228 1.9184
Mature fruiting body cap_gill 13.7727 0.8684 0.5014
Mature fruiting body stipe 16.2303 0.6954 0.4015
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 43.0985 5.3737 3.1025
NH4NO3 47.7532 1.2555 0.7249
Proline 43.7007 5.5591 3.2095
Tryptophan 44.0492 6.276 3.6235
Isoleucin 50.8162 2.1129 1.2199
Arginine 51.7178 5.062 2.9225
Metionine 47.437 4.262 2.4607
NaNO3 37.7941 1.9869 1.1471
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 43.0985 5.3737 3.1025
Citrus peel 26.056 3.2304 1.865
Poplar leaves 38.6574 5.2434 3.0273
Typha leaves 35.3195 6.1297 3.539
Overwintered Salix leaves 35.2686 7.0737 4.084
Reed flowering 27.6882 7.5595 4.3645
Tigernut 24.3992 1.4603 0.8431
Energy cane 34.0521 3.9748 2.2949
Guar gum 38.0183 16.6817 9.6312
Apple peels 34.4573 6.6655 3.8483
Cellobiose 39.9831 0.8095 0.4673
Corn stalk 39.2796 5.1061 2.948
Horse manure 38.4356 3.0718 1.7735
Lignin 28.5177 9.1013 5.2546
Microcrystalline cellulose 40.6376 7.9528 4.5916
Oak leaves 37.232 6.067 3.5028
Pectin esterified 26.6218 6.0478 3.4917
Poplar sawdust 41.2484 8.1341 4.6962
Wheat bran 29.1116 3.7056 2.1395
Chlamydomonas reinhardtii 41.1453 0.6434 0.3715
Vertatryl alcohol 30.0672 1.8479 1.0669
Furfural 44.2039 6.653 3.8411
Autoclaved mycelium 44.138 1.6588 0.9577
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 50.048 4.8061 2.7748
Ribose 59.6693 0.3402 0.1964
Mannose 59.3699 1.1892 0.8409
Fructose 59.1027 2.1203 1.2242
Arabinose 62.2553 4.4875 2.5908
Xylose 57.3058 2.511 1.4497
Galacturonic acid 58.6512 2.5522 1.4735
Rhamnogalacturonan 60.8017 3.3035 1.9073
Pectin esterified 59.5748 2.4402 1.4089
Polygalacturonic acid 57.2239 2.292 1.3233
Sodium acetate 60.7848 3.8456 2.2202
No nitrogen 57.2673 5.082 2.9341
BSA 64.2884 6.0447 3.4899
Glutamine 60.686 4.2931 2.4786
No phosphate 51.0321 3.8226 2.207
No carbon 68.2471 2.8508 2.0158
No sulphur 66.4561 5.8659 3.3867
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 43.0985 5.3737 3.1025
Amylose 45.1218 1.994 1.1512
Fucose 48.4651 0.8968 0.5178
Galactose 51.6233 2.9314 1.6924
Lactose 49.5292 1.7169 0.9912
Maltose 48.2251 3.5535 2.0516
Mannitol 47.9205 3.507 2.0247
Rhamnose 47.4505 1.7147 0.99
Sorbitol 43.4178 2.8863 1.6664
Trehalose 39.6986 7.9066 4.5649
Glycerol 44.1078 10.1741 5.874
Glucuronic acid 47.3043 3.9774 2.2963
Arabinan 38.0822 6.2413 3.6034
Galactan 38.0185 2.1725 1.2543
Galactomannan 40.1814 14.5556 8.4037
Glucan 44.1855 7.0313 4.0595
Xylan 40.4585 0.3168 0.1829
Xyloglucan 46.0569 5.6559 3.2654
Arabinogalactan 46.7616 3.3149 1.9139
Pectin 30.9833 8.3769 4.8364
Rhamnogalacturonan 28.911 7.6804 4.4343
Polygalacturonic acid 46.5136 1.9036 1.099
Mannan 42.9304 8.0066 4.6226
Amylopectin 41.412 8.178 4.7215
Inulin 64.2773 6.488 3.7459
BSA 24.9727 1.1981 0.6917
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 11.7276 0.401 0.2315
2h WAT 12.6487 1.6948 0.9785
4h WAT 12.3742 1.8138 1.0472
8h WAT 11.5191 4.3161 2.4919
16h WAT 9.4246 2.4696 1.4258
24h WAT 12.4799 1.2547 0.7244
WAT hyphal knot -30h 13.6356 0.8508 0.4912
WAT hyphal knot -22h 12.4786 3.3158 1.9144
WAT hyphal knot -15h 12.1476 1.505 0.8689
WAT hyphal knot -7.5h 14.0104 4.7269 2.7291
WAT hyphal knot 13.5313 3.0303 1.7495
WAT hyphal knot +7.5h 17.8803 3.1836 1.8381
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 28.8866 11.034 6.3705
Straw 3h 36.3273 3.7046 2.1388
Straw 6h 25.9152 9.7245 5.6144
Straw 12h 34.3001 0.2892 0.1669
Straw 24h 31.998 7.4991 4.3296
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 7.4418 4.4431 2.5652
Frost (-20C, 30min) 12.2511 0.9826 0.5673
Heat shock (47C, 2h) 14.0753 2.9389 1.6968
High CO2 9.1895 0.9033 0.5215
Drought (4% agar, 12h) 10.3631 4.3638 2.5194
Oxidative (1mM H2O2, 3h) 11.7208 1.6973 0.98
Acidic (pH4, 3h) 9.9436 0.4303 0.2484
Alkaline (pH9, 3h) 9.2316 1.4607 0.8433
Osmotic (sorbitol 2h) 14.5589 0.8658 0.4999
CongoRed (3h) 9.3496 1.153 0.6657
Cobalt chloride control 12.2474 0.7338 0.4236
Cobalt chloride 2mM 10.1781 2.4629 1.422
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 9.3201 3.1248 1.8041
Cold stimulation 8.6389 1.2368 0.7141
Scratched surface 14.7599 1.7462 1.0082
Ca2+, 200mM, 24h 10.8592 4.1063 2.3708
Cu2+, 2mM, 6h 14.8348 2.7425 1.5834
Voriconazole 10.761 2.849 1.6449
Trichoderma interaction, early 11.9148 2.1685 1.252
Trichoderma interaction 60h 7.5921 3.1321 1.8083
Cobalt chloride 2mM repeat 13.4651 4.4761 2.5843
Hypoxia 11.7812 4.2353 2.4453
Hypoxia control 12.1893 2.0424 1.1792
Protoplastation control 13.5749 0.9098 0.6433
Protoplastation 3.5h 12.3125 0.9562 0.6761
Protoplastation 1.5h 11.1491 1.5992 1.1308

General data

Systematic name -
Protein id CopciAB_82537.T0
Description A domain family that is part of the cupin metalloenzyme superfamily.

Annotation summary

0 300 600 900 1200 1226

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
Pfam PF02373 JmjC domain, hydroxylase IPR003347 171 272

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR003347 JmjC domain

GO

Go id Term Ontology
No records

KEGG

KEGG Orthology
No records

EggNOG

COG category Description
S A domain family that is part of the cupin metalloenzyme superfamily.

CAZy

Class Family Subfamily
No records

Transcription factor

Group
cupin fold

Conservation of CopciAB_82537 across fungi.

Arrow shows the origin of gene family containing CopciAB_82537.

Protein

Sequence id CopciAB_82537.T0
Sequence >CopciAB_82537.T0
MDGDDNIKIRSISTAGWSLDAILNQANFVPVDRFSAKSDAQINKAIEDFEKHGTPTIIDGWHERDDWPRDLFTLD
FFQRHSESEDIHVRNIHDWRDSTMPLDEFIAASREAPPCVAPDERVRLYGKDAECPKEWSKWIKEADVIPERLHW
NGSNDYFRYRPKNARVETLMCYLGIGDTFTPAHKDLCASSGHNLMCYTENEGSSYWFMTKSSDAAKASDFFQTLG
QELDHETHVITLGELAKAPFKVYVAEQKLGDLVLVPPRSCHQVVNFGGITLKTSWSRMTLDGLVTAFYHELPIYQ
RVCRLETYKVKSTIFCALLKQIKELEEAHPFSGSPSKPKPFQGKPNSRVSALIKSVDTLLAVFRDIIAQEWSKEK
HECLEASADVLASEQAMEHCLVCDFCGADVFQAYLECDQCKGVSDGTGGNSEGYNTYIICPGCYADGRSCKCVVM
KPKQRFPFEDLLKVVGRASAIMKGFEPDWKMKPLKAYYSTFKAACLMRSIRRKYKCVLTKEIDWAIHCRSCHNSK
SFTVLLQRFHLHATVAVSAYAEATTDDKGFHKVHQEAPHKYWRKQQEMEISQIEGTRGPIDTLRVHYALKYRTCR
PWSFEWSIPGFYDEAIQDCGTDEPSEDREVVNVDLEFSPPGSPAVVNQFLLDDTDDYPSDDYSSDDSPSASPTVH
ESLDNSYPSLPQPSTSKGRRLFMDYVLVPSAPYPIPSDSMRDSSAIENPPGPSRGTKRKQRPSIGSASTKPRIAT
SSEGSQSDSDVLERRKPAPPKPKTRNVGTNSSVVGSTTSLLAASSSTTPSLPPSHRFKSGLVATPIPRFHSVSPS
DSNDDVPPSTPVGAPAASSSKALGKRKCMDPSSSLADAMNRAHVHNAKTTPSPAKASTVRSGPSKQSDDSWEGAG
GLLEPPDHFREWFEKEIRPVFKRQGARLSIPTDCDSFISSVSNGGYDTLLQITTEEVIKDVVTRYLAAMINEKPQ
ARQFLSHIDDSIRRGHSQKSRTVDPIGSRNAPVTESSVEAQSSNPKLHHNVSGRNGDRSSAVFRSSLPHKGEQRR
GRGETRKIVDERPKTGIADAFNQRIHDPQSLPTRGIRSPTMTKNPNAKSKNATLPLQNNDRRGSLVTHVKPIAPT
KRKRSPSPLRKRTMSDKLQAELDLTRLTRGLPRSTRASQQRSESRDTNRQSSQDRNIDTSRPSSPATSEDKMGLE
GGSQQTVLHRSRMFIPNSLLMGPSNS
Length 1226

Coding

Sequence id CopciAB_82537.T0
Sequence >CopciAB_82537.T0
ATGGACGGCGATGACAACATCAAAATACGCTCTATATCAACAGCGGGGTGGTCACTCGACGCAATCCTCAACCAA
GCCAATTTCGTACCAGTTGACAGGTTTTCTGCAAAGTCAGACGCCCAAATCAACAAGGCAATAGAAGATTTCGAG
AAGCACGGAACGCCAACTATCATCGATGGATGGCACGAACGTGACGACTGGCCCAGGGATTTGTTCACCCTGGAC
TTCTTTCAGCGACACTCGGAATCAGAAGATATACACGTCAGGAACATCCATGACTGGAGAGACAGCACTATGCCC
CTGGACGAGTTCATTGCTGCCTCTCGAGAAGCACCTCCTTGCGTAGCACCCGACGAGCGGGTCCGGCTGTATGGA
AAGGATGCAGAATGCCCTAAAGAATGGAGCAAATGGATCAAGGAAGCCGATGTCATCCCTGAAAGACTACATTGG
AATGGGTCCAATGACTACTTTCGATACCGCCCCAAGAATGCACGAGTAGAAACCCTCATGTGCTATCTCGGCATT
GGTGACACCTTTACTCCAGCACACAAGGACCTCTGCGCGTCATCCGGACACAATCTGATGTGCTACACCGAGAAC
GAAGGGAGCTCGTACTGGTTCATGACCAAGAGTTCAGATGCAGCGAAAGCGAGCGACTTTTTCCAAACTTTGGGG
CAGGAACTAGACCACGAAACCCATGTCATCACGTTGGGTGAACTCGCCAAAGCTCCGTTCAAAGTTTATGTCGCT
GAACAAAAGCTTGGTGATTTGGTCCTCGTTCCTCCTCGAAGCTGCCACCAAGTGGTCAATTTTGGCGGCATCACT
CTCAAAACATCTTGGTCGAGGATGACGCTAGATGGCCTGGTGACAGCCTTTTATCACGAACTTCCCATCTACCAA
AGAGTTTGCCGCTTGGAAACCTACAAAGTAAAAAGCACCATCTTCTGCGCACTTCTCAAGCAGATCAAGGAGCTC
GAGGAAGCCCATCCCTTTTCGGGTTCACCGAGCAAGCCAAAGCCCTTCCAAGGCAAACCGAACTCTCGAGTAAGC
GCCCTAATTAAAAGCGTTGATACACTTCTGGCGGTATTTCGAGACATTATCGCTCAAGAGTGGAGCAAAGAGAAG
CACGAGTGCCTTGAGGCATCCGCAGACGTGTTGGCGAGCGAACAGGCTATGGAGCATTGCCTCGTCTGCGATTTC
TGCGGCGCCGACGTGTTCCAAGCGTACCTCGAATGTGATCAATGCAAGGGGGTCTCCGATGGTACGGGCGGGAAT
TCCGAGGGTTACAACACATATATCATTTGTCCTGGGTGTTATGCAGATGGCCGGAGCTGCAAATGTGTGGTCATG
AAACCCAAGCAACGCTTCCCCTTCGAGGATCTTCTAAAAGTCGTGGGTCGAGCCAGTGCGATAATGAAGGGCTTC
GAGCCTGACTGGAAGATGAAACCTTTGAAGGCTTACTATTCCACATTCAAAGCGGCGTGTCTGATGAGGAGCATT
CGTAGAAAGTACAAGTGTGTCCTCACCAAAGAAATTGATTGGGCTATCCACTGTCGAAGCTGCCACAACTCTAAA
TCATTCACCGTCCTCCTCCAACGGTTTCACCTTCACGCGACTGTGGCCGTGTCTGCATATGCTGAGGCCACAACA
GACGACAAAGGGTTCCACAAGGTTCACCAGGAAGCTCCTCATAAATACTGGAGAAAGCAACAGGAGATGGAAATT
AGCCAAATAGAAGGAACCCGCGGTCCCATCGATACACTTCGCGTGCATTATGCTCTGAAATATCGGACTTGTCGA
CCATGGTCGTTTGAATGGTCCATCCCGGGATTTTATGACGAGGCTATTCAGGACTGTGGTACCGATGAACCTTCT
GAGGACCGAGAGGTAGTCAACGTCGACCTGGAGTTCTCTCCTCCCGGATCTCCCGCGGTCGTGAACCAATTCCTT
CTCGATGATACTGACGACTATCCTTCGGACGACTATTCTTCGGATGACTCGCCTTCGGCCTCACCTACGGTACAC
GAGTCGCTCGACAACTCATACCCTTCCTTACCCCAGCCTAGCACATCCAAAGGAAGGCGGTTATTTATGGACTAT
GTGCTGGTCCCATCCGCACCTTACCCCATTCCTAGCGACTCGATGCGGGATTCATCCGCAATAGAGAACCCACCC
GGCCCTTCCCGGGGTACCAAACGGAAACAACGGCCGTCTATCGGCTCTGCGTCGACGAAACCAAGAATCGCGACA
AGTTCTGAAGGCTCACAGTCCGACTCGGACGTATTAGAACGACGGAAGCCTGCACCACCCAAACCTAAGACGCGG
AATGTCGGCACCAATTCCAGCGTTGTCGGGTCTACAACCTCACTTTTGGCTGCGTCCTCCAGTACAACGCCTTCA
CTACCTCCCTCGCACCGCTTCAAGTCAGGGTTGGTAGCAACGCCCATTCCGAGGTTCCATTCCGTTTCTCCATCA
GACTCCAACGATGATGTACCTCCGTCTACACCCGTGGGCGCGCCAGCCGCTTCATCAAGTAAAGCCCTTGGAAAG
CGGAAGTGCATGGATCCCAGTTCATCCCTGGCGGATGCGATGAACAGAGCGCATGTACACAATGCAAAGACCACA
CCATCCCCTGCCAAAGCTTCCACCGTCCGTTCGGGTCCTTCGAAACAGTCAGATGATTCATGGGAGGGGGCAGGG
GGACTCTTGGAACCACCGGATCATTTCAGGGAGTGGTTTGAAAAAGAAATCCGGCCAGTTTTTAAGCGCCAGGGT
GCAAGACTGTCGATTCCTACCGATTGCGATTCATTCATTTCAAGCGTGTCCAATGGTGGTTACGATACACTGTTG
CAGATCACGACAGAAGAGGTCATTAAGGACGTCGTGACCAGGTACCTAGCCGCAATGATCAACGAAAAACCCCAA
GCTCGCCAATTTCTTTCTCACATTGACGACTCCATTCGCCGTGGTCATTCGCAGAAATCGCGAACAGTGGACCCA
ATTGGGTCTAGGAATGCACCTGTAACTGAATCAAGTGTAGAGGCCCAGTCTTCCAACCCAAAGCTACACCATAAC
GTTAGTGGTCGCAATGGAGATCGATCTTCCGCCGTCTTCCGCTCGTCTTTGCCTCATAAAGGCGAACAACGTCGT
GGCAGAGGGGAAACGCGCAAGATCGTGGACGAAAGACCCAAGACTGGTATAGCGGACGCTTTCAATCAACGCATT
CACGACCCTCAATCTCTTCCAACACGAGGGATACGCTCACCGACCATGACCAAGAACCCAAATGCTAAATCCAAG
AACGCAACTCTGCCCCTCCAGAACAATGACCGCCGTGGAAGCCTGGTCACCCATGTGAAGCCGATTGCACCTACC
AAGAGAAAGCGATCTCCCAGCCCTCTTCGCAAACGGACAATGAGCGACAAATTGCAAGCAGAGCTAGACCTAACT
CGTTTAACTCGTGGATTGCCACGAAGCACTCGCGCCTCTCAGCAAAGAAGTGAGTCTCGCGATACGAACCGGCAG
TCCTCGCAGGACAGGAACATCGACACAAGTCGCCCGTCATCTCCTGCTACCTCGGAAGACAAGATGGGTTTGGAA
GGGGGTTCCCAGCAGACGGTGTTACACCGATCCCGCATGTTTATACCCAACTCTCTGCTCATGGGTCCTAGTAAT
TCCTAG
Length 3681

Transcript

Sequence id CopciAB_82537.T0
Sequence >CopciAB_82537.T0
GACCACATACTACCAGATTGCCACCCTGACTATTCGCGACGACGGCGATGCTCTAGAAGAACTTCTCTATCATGG
ACGGCGATGACAACATCAAAATACGCTCTATATCAACAGCGGGGTGGTCACTCGACGCAATCCTCAACCAAGCCA
ATTTCGTACCAGTTGACAGGTTTTCTGCAAAGTCAGACGCCCAAATCAACAAGGCAATAGAAGATTTCGAGAAGC
ACGGAACGCCAACTATCATCGATGGATGGCACGAACGTGACGACTGGCCCAGGGATTTGTTCACCCTGGACTTCT
TTCAGCGACACTCGGAATCAGAAGATATACACGTCAGGAACATCCATGACTGGAGAGACAGCACTATGCCCCTGG
ACGAGTTCATTGCTGCCTCTCGAGAAGCACCTCCTTGCGTAGCACCCGACGAGCGGGTCCGGCTGTATGGAAAGG
ATGCAGAATGCCCTAAAGAATGGAGCAAATGGATCAAGGAAGCCGATGTCATCCCTGAAAGACTACATTGGAATG
GGTCCAATGACTACTTTCGATACCGCCCCAAGAATGCACGAGTAGAAACCCTCATGTGCTATCTCGGCATTGGTG
ACACCTTTACTCCAGCACACAAGGACCTCTGCGCGTCATCCGGACACAATCTGATGTGCTACACCGAGAACGAAG
GGAGCTCGTACTGGTTCATGACCAAGAGTTCAGATGCAGCGAAAGCGAGCGACTTTTTCCAAACTTTGGGGCAGG
AACTAGACCACGAAACCCATGTCATCACGTTGGGTGAACTCGCCAAAGCTCCGTTCAAAGTTTATGTCGCTGAAC
AAAAGCTTGGTGATTTGGTCCTCGTTCCTCCTCGAAGCTGCCACCAAGTGGTCAATTTTGGCGGCATCACTCTCA
AAACATCTTGGTCGAGGATGACGCTAGATGGCCTGGTGACAGCCTTTTATCACGAACTTCCCATCTACCAAAGAG
TTTGCCGCTTGGAAACCTACAAAGTAAAAAGCACCATCTTCTGCGCACTTCTCAAGCAGATCAAGGAGCTCGAGG
AAGCCCATCCCTTTTCGGGTTCACCGAGCAAGCCAAAGCCCTTCCAAGGCAAACCGAACTCTCGAGTAAGCGCCC
TAATTAAAAGCGTTGATACACTTCTGGCGGTATTTCGAGACATTATCGCTCAAGAGTGGAGCAAAGAGAAGCACG
AGTGCCTTGAGGCATCCGCAGACGTGTTGGCGAGCGAACAGGCTATGGAGCATTGCCTCGTCTGCGATTTCTGCG
GCGCCGACGTGTTCCAAGCGTACCTCGAATGTGATCAATGCAAGGGGGTCTCCGATGGTACGGGCGGGAATTCCG
AGGGTTACAACACATATATCATTTGTCCTGGGTGTTATGCAGATGGCCGGAGCTGCAAATGTGTGGTCATGAAAC
CCAAGCAACGCTTCCCCTTCGAGGATCTTCTAAAAGTCGTGGGTCGAGCCAGTGCGATAATGAAGGGCTTCGAGC
CTGACTGGAAGATGAAACCTTTGAAGGCTTACTATTCCACATTCAAAGCGGCGTGTCTGATGAGGAGCATTCGTA
GAAAGTACAAGTGTGTCCTCACCAAAGAAATTGATTGGGCTATCCACTGTCGAAGCTGCCACAACTCTAAATCAT
TCACCGTCCTCCTCCAACGGTTTCACCTTCACGCGACTGTGGCCGTGTCTGCATATGCTGAGGCCACAACAGACG
ACAAAGGGTTCCACAAGGTTCACCAGGAAGCTCCTCATAAATACTGGAGAAAGCAACAGGAGATGGAAATTAGCC
AAATAGAAGGAACCCGCGGTCCCATCGATACACTTCGCGTGCATTATGCTCTGAAATATCGGACTTGTCGACCAT
GGTCGTTTGAATGGTCCATCCCGGGATTTTATGACGAGGCTATTCAGGACTGTGGTACCGATGAACCTTCTGAGG
ACCGAGAGGTAGTCAACGTCGACCTGGAGTTCTCTCCTCCCGGATCTCCCGCGGTCGTGAACCAATTCCTTCTCG
ATGATACTGACGACTATCCTTCGGACGACTATTCTTCGGATGACTCGCCTTCGGCCTCACCTACGGTACACGAGT
CGCTCGACAACTCATACCCTTCCTTACCCCAGCCTAGCACATCCAAAGGAAGGCGGTTATTTATGGACTATGTGC
TGGTCCCATCCGCACCTTACCCCATTCCTAGCGACTCGATGCGGGATTCATCCGCAATAGAGAACCCACCCGGCC
CTTCCCGGGGTACCAAACGGAAACAACGGCCGTCTATCGGCTCTGCGTCGACGAAACCAAGAATCGCGACAAGTT
CTGAAGGCTCACAGTCCGACTCGGACGTATTAGAACGACGGAAGCCTGCACCACCCAAACCTAAGACGCGGAATG
TCGGCACCAATTCCAGCGTTGTCGGGTCTACAACCTCACTTTTGGCTGCGTCCTCCAGTACAACGCCTTCACTAC
CTCCCTCGCACCGCTTCAAGTCAGGGTTGGTAGCAACGCCCATTCCGAGGTTCCATTCCGTTTCTCCATCAGACT
CCAACGATGATGTACCTCCGTCTACACCCGTGGGCGCGCCAGCCGCTTCATCAAGTAAAGCCCTTGGAAAGCGGA
AGTGCATGGATCCCAGTTCATCCCTGGCGGATGCGATGAACAGAGCGCATGTACACAATGCAAAGACCACACCAT
CCCCTGCCAAAGCTTCCACCGTCCGTTCGGGTCCTTCGAAACAGTCAGATGATTCATGGGAGGGGGCAGGGGGAC
TCTTGGAACCACCGGATCATTTCAGGGAGTGGTTTGAAAAAGAAATCCGGCCAGTTTTTAAGCGCCAGGGTGCAA
GACTGTCGATTCCTACCGATTGCGATTCATTCATTTCAAGCGTGTCCAATGGTGGTTACGATACACTGTTGCAGA
TCACGACAGAAGAGGTCATTAAGGACGTCGTGACCAGGTACCTAGCCGCAATGATCAACGAAAAACCCCAAGCTC
GCCAATTTCTTTCTCACATTGACGACTCCATTCGCCGTGGTCATTCGCAGAAATCGCGAACAGTGGACCCAATTG
GGTCTAGGAATGCACCTGTAACTGAATCAAGTGTAGAGGCCCAGTCTTCCAACCCAAAGCTACACCATAACGTTA
GTGGTCGCAATGGAGATCGATCTTCCGCCGTCTTCCGCTCGTCTTTGCCTCATAAAGGCGAACAACGTCGTGGCA
GAGGGGAAACGCGCAAGATCGTGGACGAAAGACCCAAGACTGGTATAGCGGACGCTTTCAATCAACGCATTCACG
ACCCTCAATCTCTTCCAACACGAGGGATACGCTCACCGACCATGACCAAGAACCCAAATGCTAAATCCAAGAACG
CAACTCTGCCCCTCCAGAACAATGACCGCCGTGGAAGCCTGGTCACCCATGTGAAGCCGATTGCACCTACCAAGA
GAAAGCGATCTCCCAGCCCTCTTCGCAAACGGACAATGAGCGACAAATTGCAAGCAGAGCTAGACCTAACTCGTT
TAACTCGTGGATTGCCACGAAGCACTCGCGCCTCTCAGCAAAGAAGTGAGTCTCGCGATACGAACCGGCAGTCCT
CGCAGGACAGGAACATCGACACAAGTCGCCCGTCATCTCCTGCTACCTCGGAAGACAAGATGGGTTTGGAAGGGG
GTTCCCAGCAGACGGTGTTACACCGATCCCGCATGTTTATACCCAACTCTCTGCTCATGGGTCCTAGTAATTCCT
AGAATCCGGGAGCCCAATCAGTATATTTCAAACCATTTGCCAGTAGTAACCACGAACCTTGTAGTAAGTACATTT
TGGAATTGCTCGCC
Length 3839

Gene

Sequence id CopciAB_82537.T0
Sequence >CopciAB_82537.T0
GACCACATACTACCAGATTGCCACCCTGACTATTCGCGACGACGGCGATGCTCTAGAAGAACTTCTCTATCATGG
ACGGCGATGACAACATCAAAATACGCTCTATATCAACAGCGGGGTGGTCACTCGACGCAATCCTCAACCAAGCCA
ATTTCGTACCAGTTGACAGGTTTTCTGCAAAGTCAGACGCCCAAATCAACAAGGCAATAGAAGATTTCGAGAAGC
ACGGAACGCCAACTATCATCGATGGATGGCACGAACGTGACGACTGGCCCAGGGATTTGTTCACCCTGGACTTCT
TTCAGCGACACTCGGAATCAGAAGGCAAGTCGTTTGGCCATCTCGATGGCTTTCTCAATTCGGGACTTACACACC
ACAGATATACACGTCAGGAACATCCATGACTGGAGAGACAGCACTATGCCCCTGGACGAGTTCATTGCTGCCTCT
CGAGAAGCACCTCCTTGCGTAGCACCCGACGGTATGTCACAAATGCCCCGGGTTCACTTTGCTTGTTCTGAAACA
TATATAGAGCGGGTCCGGCTGTATGGAAAGGATGCAGAATGCCCTAAAGAATGGAGCAAATGGATCAAGGAAGCC
GATGTCATCCCTGAAAGACTACATTGGAATGGGTCCAATGACTACTTTCGATACCGCCCCAAGAATGTTTGTCCA
TCCCCTCAGCATCCAAATTCCTCCGCATAACGTCTTTGTAGGCACGAGTAGAAACCCTCATGTGCTATCTCGGCA
TTGGTGACACCTTTACTCCAGCACACAAGGACCTCTGCGCGTCATCCGGACACAATCTGATGTGCTACACCGAGA
ACGAAGGGAGCTCGTACTGGTTCATGACCAAGAGTTCAGATGCAGCGAAAGCGAGCGACTTTTTCCAAACTTTGG
GGCAGGAACTAGACCACGAAACCCATGTCATCACGTTGGGTGAACTCGCCAAAGCTCCGTTCAAAGTTTATGTCG
CTGAACAAAAGCTTGGTGATTTGGTCCTCGTTCCTCCTCGAAGCTGCCACCAAGTGGTCAATTTTGGCGGCATCA
CTCTCAAAACATCTTGGTCGAGGATGACGCTAGATGGCCTGGTGACAGCCTTTTATCACGAACTTCCCATCTACC
AAAGGTGTGCATTTCGAGTAATGCCCATATTCTCACTGACTGACAAATCCTCCCAAGAGTTTGCCGCTTGGAAAC
CTACAAAGTAAAAAGCACCATCTTCTGCGCACTTCTCAAGCAGATCAAGGAGCTCGAGGAAGCCCATCCCTTTTC
GGGTTCACCGAGCAAGCCAAAGCCCTTCCAAGGCATGGGCCATTCTCCATTCAGCCTCCCTTATCCTGACTGACA
TTCGCGCTGAAGGCAAACCGAACTCTCGAGTAAGCGCCCTAATTAAAAGCGTTGATACACTTCTGGCGGTATTTC
GAGACATTATCGCTCAAGAGTGGAGCAAAGAGAAGCACGAGTGCCTTGAGGCATCCGCAGACGTGTTGGCGAGCG
AACAGGCTATGGAGCATTGCCTCGTCTGCGATTTCTGCGGCGCCGACGTGTTCCAAGCGTACCTCGAATGTGATC
AATGCAAGGGGGTCTCCGATGGTACGGGCGGGAATTCCGAGGGTTACAACACATATATCATTTGTCCTGGGTGTT
ATGCAGATGGCCGGAGCTGCAAATGTGTGGTCATGAAACCCAAGCAACGCTTCCCCTTCGAGGATCTTCTAAAAG
TCGTGGGTCGAGCCAGTGCGATAATGAAGGGCTTCGAGCCTGACTGGAAGATGAAACCTTTGTTTGTACCCTCTT
TTTCTTTACCTGCCTTGAATTCACCCCGGCTCCAGGAAGGCTTACTATTCCACATTCAAAGCGGCGTGTCTGATG
AGGAGCATTCGTAGAAAGGTACGTGGGTCGCTTGCTGTTTTCACTTGGGTCCCATTGACATGGGCGTTAGTACAA
GTGTGTCCTCACCAAAGAAATTGATTGGGCTATCCACTGTCGAAGCTGCCACAACTCTAAATCATTCACCGTCCT
CCTCCAACGGTTTCACCTTCACGCGACTGTGGCCGTGTCTGCATATGCTGAGGCCACAACAGACGACAAAGGGTT
CCACAAGGTTCACCAGGAAGCTCCTCATAAATACTGGAGAAAGCAACAGGAGATGGAAATTAGCCAAATAGAAGG
AACCCGCGGTCCCATCGATACACTTCGCGTGCATTATGCTCTGAAATATCGGACTTGTCGACCATGGTCGTTTGA
ATGGTCCATCCCGGGATTTTATGACGAGGCTATTCAGGACTGTGGTACCGATGTACGTCAACTTCCAGGTGGTTT
ACTGAAGCCTTATTTAACGTTTGCCCAGGAACCTTCTGAGGACCGAGAGGTAGTCAACGTCGACCTGGAGTTCTC
TCCTCCCGGATCTCCCGCGGTCGTGAACCAATTCCTTCTCGATGATACTGACGACTATCCTTCGGACGACTATTC
TTCGGATGACTCGCCTTCGGCCTCACCTACGGTACACGAGTCGCTCGACAACTCATACCCTTCCTTACCCCAGCC
TAGCACATCCAAAGGAAGGCGGTTATTTATGGACTATGTGCTGGTCCCATCCGCACCTTACCCCATTCCTAGCGA
CTCGATGCGGGATTCATCCGCAATAGAGAACCCACCCGGCCCTTCCCGGGGTACCAAACGGAAACAACGGCCGTC
TATCGGCTCTGCGTCGACGAAACCAAGAATCGCGACAAGTTCTGAAGGCTCACAGTCCGACTCGGACGTATTAGA
ACGACGGAAGCCTGCACCACCCAAACCTAAGACGCGGAATGTCGGCACCAATTCCAGCGTTGTCGGGTCTACAAC
CTCACTTTTGGCTGCGTCCTCCAGTACAACGCCTTCACTACCTCCCTCGCACCGCTTCAAGTCAGGGTTGGTAGC
AACGCCCATTCCGAGGTTCCATTCCGTTTCTCCATCAGACTCCAACGATGATGTACCTCCGTCTACACCCGTGGG
CGCGCCAGCCGCTTCATCAAGTAAAGCCCTTGGAAAGCGGAAGTGCATGGATCCCAGTTCATCCCTGGCGGATGC
GATGAACAGAGCGCATGTACACAATGCAAAGACCACACCATCCCCTGCCAAAGCTTCCACCGTCCGTTCGGGTCC
TTCGAAACAGTCAGATGATTCATGGGAGGGGGCAGGGGGACTCTTGGAACCACCGGATCATTTCAGGGAGTGGTT
TGAAAAAGAAATCCGGCCAGTTTTTAAGCGCCAGGGTGCAAGACTGTCGATTCCTACCGATTGCGATTCATTCAT
TTCAAGCGTGTCCAATGGTGGTTACGATACACTGTTGCAGGTGGGAAATATTGTTGACAAGACTCTTCGCGTTAT
GGTTGGCTAACATATGCGGCGATTTCAGATCACGACAGAAGAGGTCATTAAGGACGTCGTGACCAGGTACCTAGC
CGCAATGATCAACGAAAAACCCCAAGCTCGCCAATTTCTTTCTCACAGTCAGTTTTTCTAGCACGGTGCCCTCAC
TCACTGCTGACATGAAAACCACAGTTGACGACTCCATTCGCCGTGGTCATTCGCAGAAATCGCGAACAGTGGACC
CAATTGGGTCTAGGAATGCACCTGTAACTGAATCAAGTGTAGAGGCCCAGTCTTCCAACCCAAAGCTACACCATA
ACGTTAGTGGTCGCAATGGAGATCGATCTTCCGCCGTCTTCCGCTCGTCTTTGCCTCATAAAGGCGAACAACGTC
GTGGCAGAGGGGAAACGCGCAAGATCGTGGACGAAAGACCCAAGACTGGTATAGCGGACGCTTTCAATCAACGCA
TTCACGACCCTCAATCTCTTCCAACACGAGGGATACGCTCACCGACCATGACCAAGAACCCAAATGCTAAATCCA
AGAACGCAACTCTGCCCCTCCAGAACAATGACCGCCGTGGAAGCCTGGTCACCCATGTGAAGCCGATTGCACCTA
CCAAGAGAAAGCGATCTCCCAGCCCTCTTCGCAAACGGACAATGAGCGACAAATTGCAAGCAGAGCTAGACCTAA
CTCGTTTAACTCGTGGATTGCCACGAAGCACTCGCGCCTCTCAGCAAAGAAGTGAGTCTCGCGATACGAACCGGC
AGTCCTCGCAGGACAGGAACATCGACACAAGTCGCCCGTCATCTCCTGCTACCTCGGAAGACAAGATGGGTTTGG
AAGGGGGTTCCCAGCAGACGGTGTTACACCGATCCCGCATGTTTATACCCAACTCTCTGCTCATGGGTCCTAGTA
ATTCCTAGAATCCGGGAGCCCAATCAGTATATTTCAAACCATTTGCCAGTAGTAACCACGAACCTTGTAGTAAGT
ACATTTTGGAATTGCTCGCC
Length 4370