CC1G_01591
Coprinopsis cinerea Okoyama 7

General data

Systematic name CC1G_01591 Strain Coprinopsis cinerea A43mutB43mut pab1-1 #326
Standard name - Synonyms
Uniprot id A8NI58 Functional description Uncharacterized protein
Location Chr_10:399129..401981 Strand +
Gene length (nt) 2853 Transcript length (nt) 1721
CDS length (nt) 1566 Protein length (aa) 521

Reciprocal best hits in model fungi

Strain name Gene / Protein name
Schizosaccharomyces pombe sla1

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7261977 58.1 3.124E-184 580
Hypsizygus marmoreus strain 51987-8 Hypma_RDB17657 56 1.726E-183 578
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_195118 57.2 5.326E-183 576
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_116412 57.2 2.723E-182 574
Pleurotus ostreatus PC15 PleosPC15_2_1059064 54.4 1.04E-166 529
Pleurotus ostreatus PC9 PleosPC9_1_113124 54.4 1.018E-166 529
Pleurotus eryngii ATCC 90797 Pleery1_1484229 56.8 8.274E-162 515
Lentinula edodes NBRC 111202 Lenedo1_1061492 46.3 2.484E-147 473
Lentinula edodes W1-26 v1.0 Lentinedodes1_21619 46.4 2.465E-147 473
Ganoderma sp. 10597 SS1 v1.0 Gansp1_120098 50.5 5.884E-145 466
Schizophyllum commune H4-8 Schco3_2639628 46.6 2.246E-129 421
Flammulina velutipes Flave_chr11AA01297 46.6 2.439E-125 409
Auricularia subglabra Aurde3_1_1279080 40 3.867E-103 345
Grifola frondosa Grifr_OBZ74753 44.1 5.779E-100 335
Lentinula edodes B17 Lened_B_1_1_15359 45.9 1.465E-94 319

Expression

Name Summary Attribution Assay type
Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea Plaza et al. 2016 RNA-seq
Sample Mean cpm SD cpm Se of mean
O7 + PBS 113.0196 41.1866 23.7791
O7 + A. avenae 114.7739 19.944 11.5147
O7 + C. elegans 121.1264 18.4246 10.6374
O7 + mechanical damage 122.9975 5.1369 2.9658
O7 + E. coli 105.3766 10.0937 5.8276
O7 + B. subtilis 131.1944 26.6412 15.3813

General data

Systematic name -
Protein id 1372
Description Uncharacterized protein

Annotation summary

0 100 200 300 400 500 521

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd08029 LA_like_fungal - 56 141
CDD cd12291 RRM1_La - 155 229
Pfam PF05383 La domain IPR006630 60 117
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IPR000504 169 226
Pfam PF08777 RNA binding motif IPR014886 315 398

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR014886 La protein, xRRM domain
IPR002344 Lupus La protein
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR006630 La-type HTH domain
IPR045180 La domain containing protein
IPR036390 Winged helix DNA-binding domain superfamily

GO

Go id Term Ontology
GO:0003723 RNA binding MF
GO:0005634 nucleus CC
GO:0006396 RNA processing BP
GO:1990904 ribonucleoprotein complex CC
GO:0003676 nucleic acid binding MF

KEGG

KEGG Orthology
K11090

EggNOG

COG category Description
A Domain in the RNA-binding Lupus La protein; unknown function

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CC1G_01591 across fungi.

Arrow shows the origin of gene family containing CC1G_01591.

Protein

Sequence id 1372
Sequence >1372
MSGEDSSATTMAVDAVTTTETPASTTTTTAAAAPSETATTTNPEKPIEDGEALAKMEKARQQVEFYFADSNLPYD
KFMWTLHTKDPEHWIPLSTIASFKRMREYTALGAEFVLNALRPSTFLELDESGREGAELAGVRVRRKTEVREVKD
AFERSVYAKGFPEEDPTLQKRLEEFFATFGKVNSVRMRRDEHKKFKTSVFAEFADFETVDKFLKADPKPTFEGKE
LLIMSKHDYCEMKIKEKGLTGKAANHRREMLAKGRGFDAFRESSTSSPSSSSKDEPKEILLEYIGNRIPIKKDSE
GNGYVEESSIPFVRGATLRFDGCAGDCTWSDIKDPIKTLFDGKPPYIKFTRGDDFGLVGFHKALSEEEVEKVKEA
VRKVNGREVRWSVPGEEEEKAFQVERAQVAARGAMAQITGGGKKAGSGGRGGGRGGGRGGRGGRGGRGGGRGGAR
DNGRKENGKEASGGAKEEKGKAEGGDVEVGEKRKRAVEPDGGPYTGVRGTNAPPAVVASSESAAKKAKTDA
Length 521

Coding

Sequence id CC1G_01591T0
Sequence >CC1G_01591T0
ATGTCTGGAGAAGATAGTTCTGCTACTACTATGGCCGTCGATGCGGTTACTACGACGGAAACTCCCGCCTCTACC
ACTACCACTACTGCCGCAGCTGCTCCCTCAGAAACTGCAACAACAACCAACCCCGAAAAACCCATCGAAGACGGG
GAAGCGCTCGCCAAGATGGAAAAAGCTCGTCAACAAGTCGAGTTCTACTTTGCAGATTCGAATTTGCCTTATGAC
AAATTCATGTGGACCCTGCACACCAAAGACCCCGAACACTGGATCCCCCTCTCCACCATCGCCTCCTTCAAACGC
ATGCGCGAATACACCGCCCTCGGCGCCGAGTTCGTCTTGAACGCCCTGCGCCCCTCGACCTTCCTCGAGCTCGAC
GAGAGTGGGAGGGAGGGTGCCGAGTTGGCTGGTGTGAGGGTTAGGAGGAAGACGGAGGTTAGGGAGGTGAAGGAT
GCGTTTGAGAGGAGTGTTTATGCTAAAGGTTTCCCGGAGGAAGACCCCACACTGCAGAAACGCCTCGAAGAGTTC
TTTGCGACGTTCGGCAAGGTGAATTCGGTTAGGATGAGGAGGGACGAGCATAAAAAGTTCAAGACCTCCGTGTTC
GCTGAATTCGCCGATTTCGAGACTGTGGACAAGTTCCTCAAGGCTGATCCCAAACCTACGTTTGAAGGGAAGGAG
TTGTTGATTATGTCCAAACACGACTACTGCGAAATGAAAATCAAAGAAAAAGGTCTAACCGGAAAGGCCGCGAAC
CACCGCCGCGAAATGCTCGCCAAAGGACGGGGATTCGACGCCTTCCGCGAGTCCTCTACCTCCTCCCCTTCTTCC
TCCTCCAAAGACGAACCCAAAGAAATCCTCCTCGAATACATCGGAAACCGCATCCCGATCAAAAAAGATTCCGAA
GGGAACGGCTATGTGGAAGAATCCTCCATCCCTTTCGTGCGAGGTGCTACACTCCGGTTCGACGGCTGCGCCGGG
GACTGTACCTGGTCCGACATCAAAGACCCTATCAAAACCCTCTTCGACGGTAAACCGCCCTATATCAAGTTTACT
CGGGGTGATGATTTTGGGTTGGTGGGATTCCATAAGGCGTTGAGTGAGGAGGAGGTGGAGAAGGTTAAGGAGGCG
GTGAGGAAGGTTAATGGAAGGGAGGTGAGGTGGAGTGTGCCCGGGGAGGAGGAGGAGAAGGCGTTCCAGGTTGAG
AGGGCACAGGTGGCGGCGAGGGGGGCGATGGCGCAGATTACGGGAGGGGGGAAGAAGGCCGGGTCGGGTGGACGC
GGTGGTGGCCGGGGAGGTGGACGTGGTGGCCGGGGAGGAAGGGGTGGTCGGGGTGGAGGACGAGGTGGAGCACGG
GATAACGGGAGGAAGGAGAATGGCAAGGAGGCTTCAGGCGGGGCGAAGGAGGAGAAGGGCAAAGCTGAGGGAGGA
GATGTAGAGGTTGGTGAGAAGAGGAAGAGGGCTGTTGAGCCTGATGGGGGACCGTATACGGGTGTGAGGGGTACG
AATGCCCCGCCTGCGGTTGTTGCGTCTAGTGAGAGTGCGGCGAAGAAGGCCAAGACGGATGCT
Length 1566

Transcript

Sequence id CC1G_01591T0
Sequence >CC1G_01591T0
CAGCTTCACCTCTCAAAAGTTCTGCTAGGACGCTTACGCTTATCCTGCGATAAGCAGTACTCTCTAAAAAGGATC
TTATCCAACCTAGAGCGATAGGAAGATCTACCACTGTTGGGCCTCCAAGTTCTGGTTGAATTCGAAAAACTTGTT
GAAGAATGTCTGGAGAAGATAGTTCTGCTACTACTATGGCCGTCGATGCGGTTACTACGACGGAAACTCCCGCCT
CTACCACTACCACTACTGCCGCAGCTGCTCCCTCAGAAACTGCAACAACAACCAACCCCGAAAAACCCATCGAAG
ACGGGGAAGCGCTCGCCAAGATGGAAAAAGCTCGTCAACAAGTCGAGTTCTACTTTGCAGATTCGAATTTGCCTT
ATGACAAATTCATGTGGACCCTGCACACCAAAGACCCCGAACACTGGATCCCCCTCTCCACCATCGCCTCCTTCA
AACGCATGCGCGAATACACCGCCCTCGGCGCCGAGTTCGTCTTGAACGCCCTGCGCCCCTCGACCTTCCTCGAGC
TCGACGAGAGTGGGAGGGAGGGTGCCGAGTTGGCTGGTGTGAGGGTTAGGAGGAAGACGGAGGTTAGGGAGGTGA
AGGATGCGTTTGAGAGGAGTGTTTATGCTAAAGGTTTCCCGGAGGAAGACCCCACACTGCAGAAACGCCTCGAAG
AGTTCTTTGCGACGTTCGGCAAGGTGAATTCGGTTAGGATGAGGAGGGACGAGCATAAAAAGTTCAAGACCTCCG
TGTTCGCTGAATTCGCCGATTTCGAGACTGTGGACAAGTTCCTCAAGGCTGATCCCAAACCTACGTTTGAAGGGA
AGGAGTTGTTGATTATGTCCAAACACGACTACTGCGAAATGAAAATCAAAGAAAAAGGTCTAACCGGAAAGGCCG
CGAACCACCGCCGCGAAATGCTCGCCAAAGGACGGGGATTCGACGCCTTCCGCGAGTCCTCTACCTCCTCCCCTT
CTTCCTCCTCCAAAGACGAACCCAAAGAAATCCTCCTCGAATACATCGGAAACCGCATCCCGATCAAAAAAGATT
CCGAAGGGAACGGCTATGTGGAAGAATCCTCCATCCCTTTCGTGCGAGGTGCTACACTCCGGTTCGACGGCTGCG
CCGGGGACTGTACCTGGTCCGACATCAAAGACCCTATCAAAACCCTCTTCGACGGTAAACCGCCCTATATCAAGT
TTACTCGGGGTGATGATTTTGGGTTGGTGGGATTCCATAAGGCGTTGAGTGAGGAGGAGGTGGAGAAGGTTAAGG
AGGCGGTGAGGAAGGTTAATGGAAGGGAGGTGAGGTGGAGTGTGCCCGGGGAGGAGGAGGAGAAGGCGTTCCAGG
TTGAGAGGGCACAGGTGGCGGCGAGGGGGGCGATGGCGCAGATTACGGGAGGGGGGAAGAAGGCCGGGTCGGGTG
GACGCGGTGGTGGCCGGGGAGGTGGACGTGGTGGCCGGGGAGGAAGGGGTGGTCGGGGTGGAGGACGAGGTGGAG
CACGGGATAACGGGAGGAAGGAGAATGGCAAGGAGGCTTCAGGCGGGGCGAAGGAGGAGAAGGGCAAAGCTGAGG
GAGGAGATGTAGAGGTTGGTGAGAAGAGGAAGAGGGCTGTTGAGCCTGATGGGGGACCGTATACGGGTGTGAGGG
GTACGAATGCCCCGCCTGCGGTTGTTGCGTCTAGTGAGAGTGCGGCGAAGAAGGCCAAGACGGATGCTTGA
Length 1721

Gene

Sequence id CC1G_01591T0
Sequence >CC1G_01591T0
CAGCTTCACCTCTCAAAAGTTCTGCTAGGACGCTTACGCTTATCCTGCGATAAGCAGTACTCTCTAAAAAGGATC
TTATCCAACCTAGAGCGATAGGAAGATCTACCACTGTTGGGCCTCCAAGTTCTGGTTGAATTCGAAAAACTTGTT
GAAGAATGTCTGGAGAAGATAGTTCTGCTACTACTATGGCCGTCGATGCGGTTACTACGACGGAAACTCCCGCCT
CTACCACTACCACTACTGCCGCAGCTGCTCCCTCAGAAACTGCAACAACAACCAACCCCGAAAAACCCATCGAAG
ACGGGGAAGCGCTCGCCAAGATGGAAAAAGCTCGTCAACAAGGTGCGTATCTGTCTACGTCTGTGTGTTGTGAAC
GGGGATGACTGATTGTAATTTTGAAACGGTACAGTCGAGTTCTACTTTGCAGATTCGAATTTGCCTTATGACAAG
TGCGTTTCCTGCCTCCCTCTTCCCTTCCCTTCCCCCTCCCTCCTCCTTCCCCCATCCCCTCACAAACCCCCTCCC
ACTCCAACCCCCACTAACCCCTCCTCCCTCCCTCCTCCAGATTCATGTGGACCCTGCACACCAAAGACCCCGAAC
ACTGGATCCCCCTCTCCACCATCGCCTCCTTCAAACGCATGCGCGAATACACCGCCCTCGGCGCCGAGTTCGTCT
TGAACGCCCTGCGCCCCTCGACCTTCCTCGAGCTCGACGAGAGTGGGAGGGAGGGTGCCGAGTTGGCTGGTGTGA
GGGTTAGGAGGAAGACGGAGGTTAGGGAGGTGAAGGATGCGTTTGAGAGGAGTGTTTATGCTGTGAGTTCCTTTG
CGTCCCTGTGTGTGTGTGGAAGTGGAAGTAAGTAGTGTTGATTGATGCGTTTGGTATTTTTGTTTTCTTTTTGTA
GAAAGGTTTCCCGGAGGAAGACCCCACACTGCAGAAACGCCTCGAAGAGTTCTTTGCGACGTTCGGCAAGGTGAA
TTCGGTTAGGATGAGGAGGGACGAGCATAAAAAGTTCAAGGTGTGTCTTCCTTCCCGCATGAACCCTTCTGTTTA
TTTTGTTCCTTTTCTTTATCCCCTTCTGTTTATCCTCCTGTATGGCCTCGTTCGATTCTTGCGTACCGCCTTTAC
CATGTCAATCGTGTTTTTTCCTCCCATCGCTATTATGTTTCTCGCGCATCTTCATTGCCGCTACCCCTTTTGTGG
TTCCCCTCCCACACTTGCCCCTCGAGCCCCCTCCCAGGATATCCATTCCCCCCTCGACGCGTACCCGAGACCTGG
AACATCGACATCATACTCCTCCTCGTTTGTTTTTCCTGTGCCGTCGGTCCCCAGATCCATGGCGGCGTTATCCTA
TACGCTGCTCTGCTTCGTGTTTCGTGAAGTCCCCTGAATCGTTTCGTCTTCTTCTTCAATGACGTTTCGGCGTCA
ACCTTCCCCGTGACGTTCGACAAGGTCCACGCGTTTCATCTGTCCGCCGTGCCCCCCTGTTCGCTGGGCGACGTC
TTGCAAACTGGGGGTTGCCGCTGTCCCTGGACCAGAAGTCCTGTTGTCCCACCCGCCGACTCGATTTCATTTTTT
TTTCCTTGGTTGCGCATGGCTGTCCTTTTTCCTGGTTACCCACGACGAATCCGTCCGTATACGATTACGCGTAAC
TGACACCTCCACTCCCACTTCCAGACCTCCGTGTTCGCTGAATTCGCCGATTTCGAGACTGTGGACAAGTTCCTC
AAGGCTGATCCCAAACCTACGTTTGAAGGGAAGGAGTTGTTGATTATGTCCAAGTGGGTCGTCTCTTTCTCTCGT
TGGGATTTTCTCCTTGGCTTTTATGAGCCTGTCCCCTTCTGTTTTCGACCATCCTCGCGGGGTTGCATCTCTCAG
TTCTACCACTCCGCGGCCGGTCATTCGACCGCCCTCTTTCATGTACTCGATATATAACAACTCCTTCGCCCTTCT
CGTTAACGTCTACTTACACCCTAACCCAGACACGACTACTGCGAAATGAAAATCAAAGAAAAAGGTCTAACCGGA
AAGGCCGCGAACCACCGCCGCGAAATGCTCGCCAAAGGACGGGGATTCGACGCCTTCCGCGAGTCCTCTACCTCC
TCCCCTTCTTCCTCCTCCAAAGACGAACCCAAAGAAATCCTCCTCGAATACATCGGAAACCGCATCCCGATCAAA
AAAGATTCCGAAGGGAACGGCTATGTGGAAGAATCCTCCATCCCTTTCGTGCGAGGTGCTACACTCCGGTTCGAC
GGCTGCGCCGGGGACTGTACCTGGTCCGACATCAAAGACCCTATCAAAACCCTCTTCGACGGTAAACCGCCCTAT
ATCAAGTTTACTCGGGGTGATGATTTTGGGTTGGTGGGATTCCATAAGGCGTTGAGTGAGGAGGAGGTGGAGAAG
GTTAAGGAGGCGGTGAGGAAGGTTAATGGAAGGGAGGTGAGGTGGAGTGTGCCCGGGGAGGAGGAGGAGAAGGCG
TTCCAGGTTGAGAGGGCACAGGTGGCGGCGAGGGGGGCGATGGCGCAGATTACGGGAGGGGGGAAGAAGGCCGGG
TCGGGTGGACGCGGTGGTGGCCGGGGAGGTGGACGTGGTGGCCGGGGAGGAAGGGGTGGTCGGGGTGGAGGACGA
GGTGGAGCACGGGATAACGGGAGGAAGGAGAATGGCAAGGAGGCTTCAGGCGGGGCGAAGGAGGAGAAGGGCAAA
GCTGAGGGAGGAGATGTAGAGGTTGGTGAGAAGAGGAAGAGGGCTGTTGAGCCTGATGGGGGACCGTATACGGGT
GTGAGGGGTACGAATGCCCCGCCTGCGGTTGTTGCGTCTAGTGAGAGTGCGGCGAAGAAGGCCAAGACGGATGCT
TGA
Length 2853