CC1G_01991
Coprinopsis cinerea Okoyama 7

General data

Systematic name CC1G_01991 Strain Coprinopsis cinerea A43mutB43mut pab1-1 #326
Standard name - Synonyms
Uniprot id A8N680 Functional description Homeobox domain-containing protein
Location Chr_3:1769005..1770043 Strand +
Gene length (nt) 1039 Transcript length (nt) 984
CDS length (nt) 984 Protein length (aa) 327

Reciprocal best hits in model fungi

Strain name Gene / Protein name
No records

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7261664 52.7 4.807E-111 361
Hypsizygus marmoreus strain 51987-8 Hypma_RDB25181 47.4 4.22E-94 312
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_192433 49.8 1.624E-90 301
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_112464 49.8 1.692E-90 301
Pleurotus ostreatus PC9 PleosPC9_1_84519 43.5 1.096E-75 258
Pleurotus ostreatus PC15 PleosPC15_2_1112690 43.3 2.465E-75 257
Pleurotus eryngii ATCC 90797 Pleery1_1438647 43.1 6.387E-75 256
Lentinula edodes W1-26 v1.0 Lentinedodes1_16333 43 7.646E-72 247
Lentinula edodes NBRC 111202 Lenedo1_1171205 41 5.694E-64 224
Flammulina velutipes Flave_chr07AA00573 38.5 1.83E-54 196
Schizophyllum commune H4-8 Schco3_2632356 37.9 3.445E-41 157
Ganoderma sp. 10597 SS1 v1.0 Gansp1_127053 33 6.207E-39 150
Grifola frondosa Grifr_OBZ68006 33.4 6.01E-31 126
Lentinula edodes B17 Lened_B_1_1_2729 80.5 2.159E-27 115
Auricularia subglabra Aurde3_1_1274371 30.2 1.261E-19 92

Expression

Name Summary Attribution Assay type
Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea Plaza et al. 2016 RNA-seq
Sample Mean cpm SD cpm Se of mean
O7 + PBS 23.7503 8.5545 4.9389
O7 + A. avenae 19.6349 7.5913 4.3828
O7 + C. elegans 24.7269 4.2691 2.4648
O7 + mechanical damage 21.9252 7.8138 4.5113
O7 + E. coli 32.4188 6.9274 3.9995
O7 + B. subtilis 23.6073 5.2216 3.0147

General data

Systematic name -
Protein id 1719
Description Homeobox domain-containing protein

Annotation summary

0 100 200 300 327

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd00086 homeodomain IPR001356 184 242
Pfam PF00046 Homeodomain IPR001356 184 240

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR017970 Homeobox, conserved site
IPR009057 Homeobox-like domain superfamily
IPR001356 Homeobox domain

GO

Go id Term Ontology
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific MF
GO:0006355 regulation of transcription, DNA-templated BP
GO:0003677 DNA binding MF

KEGG

KEGG Orthology
K09323
K12411

EggNOG

COG category Description
K Homeodomain

CAZy

Class Family Subfamily
No records

Transcription factor

Group
helix-turn-helix, homeobox

Conservation of CC1G_01991 across fungi.

Arrow shows the origin of gene family containing CC1G_01991.

Protein

Sequence id 1719
Sequence >1719
MVFKLSPLAPIAPPLTPAFPNYDTTSGHLHERHSPQPTYGYTTRTTSPPPMNPTDPRRLPPLTTSSSPGGDRWQQ
SANYNHGMPAVHGYPSGNSIRSPTASYPSQYVTYPSGNQGTYTYMSTYDPLAMTPQGQQGLFDDIDSVGLQQPRS
TSPYGRTHAQTQLSSTNFTPPPVSPISPEEPTIKKKRKRADAAQLKVLNETYARTAFPSTEERQALAKRLDMSAR
SVQIWFQNKRQSMRQTNRQSSTVSSSGHQQQYALQSSHNERLLDDGTHGSSYGGSITLSETPYMTGSSVQDAMTR
SHTSLSSSAHRRVRGPEEDAQRWPRGY
Length 327

Coding

Sequence id CC1G_01991T0
Sequence >CC1G_01991T0
ATGGTGTTCAAATTATCTCCATTGGCGCCAATAGCCCCGCCACTCACCCCCGCATTCCCCAACTATGACACGACG
AGCGGCCATCTCCACGAACGACACTCTCCGCAACCTACTTACGGTTACACTACTCGGACAACCTCGCCTCCTCCG
ATGAACCCTACAGATCCTCGCAGGCTCCCTCCCCTCACGACGTCGTCGAGCCCTGGTGGCGATCGATGGCAACAG
TCGGCCAACTACAACCATGGTATGCCCGCTGTCCATGGCTACCCCTCCGGCAATAGCATTCGCTCGCCGACTGCG
AGCTACCCTTCGCAGTATGTTACCTATCCCAGCGGTAACCAAGGTACTTACACCTATATGTCAACATACGATCCG
CTCGCGATGACCCCCCAAGGCCAACAAGGCCTCTTTGACGATATCGACTCTGTCGGACTCCAACAACCTCGATCA
ACCTCGCCTTATGGGCGTACCCATGCCCAAACGCAGTTGTCTTCTACCAATTTCACCCCTCCACCGGTATCGCCC
ATTTCCCCGGAGGAGCCCACCATCAAGAAAAAGCGCAAGCGTGCCGACGCTGCTCAGCTCAAGGTCCTCAATGAG
ACCTATGCCCGCACCGCTTTCCCATCCACGGAAGAACGGCAGGCCCTTGCAAAGCGTTTGGACATGTCGGCCAGA
AGTGTTCAGATTTGGTTCCAGAACAAGCGGCAGTCGATGAGGCAGACGAACCGCCAATCGTCTACCGTTTCGTCT
TCTGGCCATCAACAGCAGTACGCGCTGCAGAGCTCTCACAACGAGAGGTTGTTGGACGATGGGACCCATGGATCT
TCTTACGGCGGCTCTATCACTTTGTCGGAGACCCCTTACATGACAGGAAGCTCTGTGCAAGACGCGATGACACGT
TCACATACCTCCCTTTCATCTTCTGCGCATCGCCGAGTGCGAGGCCCTGAAGAAGACGCTCAACGGTGGCCTCGC
GGTTAC
Length 984

Transcript

Sequence id CC1G_01991T0
Sequence >CC1G_01991T0
ATGGTGTTCAAATTATCTCCATTGGCGCCAATAGCCCCGCCACTCACCCCCGCATTCCCCAACTATGACACGACG
AGCGGCCATCTCCACGAACGACACTCTCCGCAACCTACTTACGGTTACACTACTCGGACAACCTCGCCTCCTCCG
ATGAACCCTACAGATCCTCGCAGGCTCCCTCCCCTCACGACGTCGTCGAGCCCTGGTGGCGATCGATGGCAACAG
TCGGCCAACTACAACCATGGTATGCCCGCTGTCCATGGCTACCCCTCCGGCAATAGCATTCGCTCGCCGACTGCG
AGCTACCCTTCGCAGTATGTTACCTATCCCAGCGGTAACCAAGGTACTTACACCTATATGTCAACATACGATCCG
CTCGCGATGACCCCCCAAGGCCAACAAGGCCTCTTTGACGATATCGACTCTGTCGGACTCCAACAACCTCGATCA
ACCTCGCCTTATGGGCGTACCCATGCCCAAACGCAGTTGTCTTCTACCAATTTCACCCCTCCACCGGTATCGCCC
ATTTCCCCGGAGGAGCCCACCATCAAGAAAAAGCGCAAGCGTGCCGACGCTGCTCAGCTCAAGGTCCTCAATGAG
ACCTATGCCCGCACCGCTTTCCCATCCACGGAAGAACGGCAGGCCCTTGCAAAGCGTTTGGACATGTCGGCCAGA
AGTGTTCAGATTTGGTTCCAGAACAAGCGGCAGTCGATGAGGCAGACGAACCGCCAATCGTCTACCGTTTCGTCT
TCTGGCCATCAACAGCAGTACGCGCTGCAGAGCTCTCACAACGAGAGGTTGTTGGACGATGGGACCCATGGATCT
TCTTACGGCGGCTCTATCACTTTGTCGGAGACCCCTTACATGACAGGAAGCTCTGTGCAAGACGCGATGACACGT
TCACATACCTCCCTTTCATCTTCTGCGCATCGCCGAGTGCGAGGCCCTGAAGAAGACGCTCAACGGTGGCCTCGC
GGTTACTGA
Length 984

Gene

Sequence id CC1G_01991T0
Sequence >CC1G_01991T0
ATGGTGTTCAAATTATCTCCATTGGCGCCAATAGCCCCGCCACTCACCCCCGCATTCCCCAACTATGACACGACG
AGCGGCCATCTCCACGAACGACACTCTCCGCAACCTACTTACGGTTACACTACTCGGACAACCTCGCCTCCTCCG
ATGAACCCTACAGATCCTCGCAGGCTCCCTCCCCTCACGACGTCGTCGAGCCCTGGTGGCGATCGATGGCAACAG
TCGGCCAACTACAACCATGGTATGCCCGCTGTCCATGGCTACCCCTCCGGCAATAGCATTCGCTCGCCGACTGCG
AGCTACCCTTCGCAGTATGTTACCTATCCCAGCGGTAACCAAGGTACTTACACCTATATGTCAACATACGATCCG
CTCGCGATGACCCCCCAAGGCCAACAAGGCCTCTTTGACGATATCGACTCTGTCGGACTCCAACAACCTCGATCA
ACCTCGCCTTATGGGCGTACCCATGCCCAAACGCAGTTGTCTTCTACCAATTTCACCCCTCCACCGGTATCGCCC
ATTTCCCCGGAGGAGCCCACCATCAAGAAAAAGCGCAAGCGTGCCGACGCTGCTCAGCTCAAGGTCCTCAATGAG
ACCTATGCCCGCACCGCTTTCCCATCCACGGAAGAACGGCAGGCCCTTGCAAAGCGTTTGGACATGTCGGCCAGA
AGTGTTCAGATTTGGTACGTCATCATGGTGCCTTATATATTTTTGCCATCCGTATTAACAAGGATCCAGGTTCCA
GAACAAGCGGCAGTCGATGAGGCAGACGAACCGCCAATCGTCTACCGTTTCGTCTTCTGGCCATCAACAGCAGTA
CGCGCTGCAGAGCTCTCACAACGAGAGGTTGTTGGACGATGGGACCCATGGATCTTCTTACGGCGGCTCTATCAC
TTTGTCGGAGACCCCTTACATGACAGGAAGCTCTGTGCAAGACGCGATGACACGTTCACATACCTCCCTTTCATC
TTCTGCGCATCGCCGAGTGCGAGGCCCTGAAGAAGACGCTCAACGGTGGCCTCGCGGTTACTGA
Length 1039