CC1G_02860
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_02860 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8N091 | Functional description | Mannanase |
| Location | Chr_1:410815..412866 | Strand | - |
| Gene length (nt) | 2052 | Transcript length (nt) | 1419 |
| CDS length (nt) | 1419 | Protein length (aa) | 472 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits | |
|---|---|---|---|---|---|
| No records | |||||
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 2478 |
| Description | Mannanase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00150 | Cellulase (glycosyl hydrolase family 5) | IPR001547 | 43 | 263 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| SP(Sec/SPI) | 1 | 17 | 0.9896 |
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR045053 | Mannan endo-1,4-beta-mannosidase-like |
| IPR001547 | Glycoside hydrolase, family 5 |
| IPR017853 | Glycoside hydrolase superfamily |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
| GO:0071704 | organic substance metabolic process | BP |
KEGG
| KEGG Orthology |
|---|
| K19355 |
EggNOG
| COG category | Description |
|---|---|
| G | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| GH | GH5 | GH5_30 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_02860 across fungi.
Arrow shows the origin of gene family containing CC1G_02860.
Protein
| Sequence id | 2478 |
|---|---|
| Sequence |
>2478 MKLLLPVVLLQLWLVNAMSLVARNNRSSSFVTVKDGRFSLDNQLFRFYGTNAYWIQMTTDDDMENTFHAIATAGY NVVRTWAFNDVPSKPASGPYFQVLNSNGGTINEGNDGLKRLDKAVSLAQKYGIKLLLSLTNNWNPERPVPNTAWN RRANTRELPRGYLSNDYGGMDAYVRAFRPNGTHDSFYTDGTIIEAFKNYVSHVVKRYANSPAVLAWELGNDLRCS STLPASNNCNTGTITNWTADISSFIKSIDSNHLITAGDGGFYCLKCPKRFAKDFTKPTSSLPGSAFDGSYGVDTE DILAIPSIDFGSFQLFPDQVNYFPTVDDSFATKAIGDGGKWISAHSNTASRLGKPEALTAASILGKENYSSFAPF NSTSQIPDGTPCAGVEPFQVDYAFTSWAGVALHGNIGGVLEYQWQQDGLTSHGTIHENWEKRALTESPQDGSARY KGPASGQNAEQFAADLPPIEDE |
| Length | 472 |
Coding
| Sequence id | CC1G_02860T0 |
|---|---|
| Sequence |
>CC1G_02860T0 ATGAAGCTTCTCCTACCTGTCGTCCTCCTTCAACTATGGCTTGTCAATGCAATGAGCTTGGTTGCACGCAACAAC CGATCCTCTAGCTTTGTCACGGTCAAAGACGGTCGGTTCAGTTTGGACAACCAGCTGTTCCGCTTCTATGGAACG AACGCGTATTGGATTCAAATGACGACGGACGACGACATGGAGAACACCTTCCACGCCATTGCTACCGCGGGCTAC AACGTTGTTCGCACTTGGGCTTTCAACGATGTCCCTAGCAAGCCTGCGTCGGGTCCTTACTTCCAGGTTCTCAAT AGCAACGGCGGCACCATCAACGAGGGCAACGACGGCCTCAAGCGCCTGGACAAGGCGGTGTCGTTGGCTCAGAAA TACGGAATCAAGCTGCTCCTCAGTCTCACCAACAACTGGAATCCTGAACGCCCTGTCCCAAACACCGCCTGGAAC CGCCGCGCCAACACGAGGGAACTTCCAAGAGGATACCTTTCGAACGACTATGGGGGAATGGATGCTTATGTCCGT GCCTTCCGTCCAAACGGGACTCACGACTCGTTCTACACCGATGGCACCATCATTGAAGCTTTTAAGAATTACGTG TCTCATGTTGTAAAGCGTTACGCTAACAGCCCCGCCGTGCTCGCCTGGGAGCTGGGTAACGACTTGAGGTGCTCG TCAACTCTCCCAGCGTCTAACAACTGTAACACTGGAACTATTACCAACTGGACGGCGGACATCTCCAGCTTTATC AAGTCTATTGACTCCAATCACCTTATCACTGCAGGTGACGGTGGCTTTTACTGTTTGAAATGCCCCAAGAGATTC GCAAAGGACTTCACCAAACCCACCTCATCTCTTCCCGGCAGCGCTTTCGACGGGTCCTACGGCGTTGATACAGAG GACATTCTTGCCATCCCTTCCATTGACTTCGGATCTTTCCAACTCTTCCCCGATCAGGTGAACTACTTCCCTACC GTCGATGACTCGTTCGCTACAAAGGCTATCGGCGATGGTGGCAAATGGATTTCGGCCCATTCCAACACTGCATCC AGGCTTGGCAAGCCGGAAGCGCTCACTGCAGCTTCCATTCTTGGCAAGGAGAACTACTCCTCTTTCGCCCCATTC AACTCGACCTCCCAGATCCCTGACGGTACACCCTGCGCGGGTGTTGAACCATTCCAGGTCGACTATGCATTCACC TCATGGGCAGGAGTCGCCCTTCACGGCAACATCGGCGGAGTCCTCGAATATCAGTGGCAACAAGACGGTCTGACC AGTCACGGAACGATCCACGAGAACTGGGAGAAGAGAGCCCTCACCGAGTCTCCCCAGGATGGCTCTGCTCGCTAC AAAGGCCCTGCTAGTGGCCAGAATGCCGAGCAATTCGCTGCGGACTTGCCGCCCATCGAGGACGAG |
| Length | 1419 |
Transcript
| Sequence id | CC1G_02860T0 |
|---|---|
| Sequence |
>CC1G_02860T0 ATGAAGCTTCTCCTACCTGTCGTCCTCCTTCAACTATGGCTTGTCAATGCAATGAGCTTGGTTGCACGCAACAAC CGATCCTCTAGCTTTGTCACGGTCAAAGACGGTCGGTTCAGTTTGGACAACCAGCTGTTCCGCTTCTATGGAACG AACGCGTATTGGATTCAAATGACGACGGACGACGACATGGAGAACACCTTCCACGCCATTGCTACCGCGGGCTAC AACGTTGTTCGCACTTGGGCTTTCAACGATGTCCCTAGCAAGCCTGCGTCGGGTCCTTACTTCCAGGTTCTCAAT AGCAACGGCGGCACCATCAACGAGGGCAACGACGGCCTCAAGCGCCTGGACAAGGCGGTGTCGTTGGCTCAGAAA TACGGAATCAAGCTGCTCCTCAGTCTCACCAACAACTGGAATCCTGAACGCCCTGTCCCAAACACCGCCTGGAAC CGCCGCGCCAACACGAGGGAACTTCCAAGAGGATACCTTTCGAACGACTATGGGGGAATGGATGCTTATGTCCGT GCCTTCCGTCCAAACGGGACTCACGACTCGTTCTACACCGATGGCACCATCATTGAAGCTTTTAAGAATTACGTG TCTCATGTTGTAAAGCGTTACGCTAACAGCCCCGCCGTGCTCGCCTGGGAGCTGGGTAACGACTTGAGGTGCTCG TCAACTCTCCCAGCGTCTAACAACTGTAACACTGGAACTATTACCAACTGGACGGCGGACATCTCCAGCTTTATC AAGTCTATTGACTCCAATCACCTTATCACTGCAGGTGACGGTGGCTTTTACTGTTTGAAATGCCCCAAGAGATTC GCAAAGGACTTCACCAAACCCACCTCATCTCTTCCCGGCAGCGCTTTCGACGGGTCCTACGGCGTTGATACAGAG GACATTCTTGCCATCCCTTCCATTGACTTCGGATCTTTCCAACTCTTCCCCGATCAGGTGAACTACTTCCCTACC GTCGATGACTCGTTCGCTACAAAGGCTATCGGCGATGGTGGCAAATGGATTTCGGCCCATTCCAACACTGCATCC AGGCTTGGCAAGCCGGAAGCGCTCACTGCAGCTTCCATTCTTGGCAAGGAGAACTACTCCTCTTTCGCCCCATTC AACTCGACCTCCCAGATCCCTGACGGTACACCCTGCGCGGGTGTTGAACCATTCCAGGTCGACTATGCATTCACC TCATGGGCAGGAGTCGCCCTTCACGGCAACATCGGCGGAGTCCTCGAATATCAGTGGCAACAAGACGGTCTGACC AGTCACGGAACGATCCACGAGAACTGGGAGAAGAGAGCCCTCACCGAGTCTCCCCAGGATGGCTCTGCTCGCTAC AAAGGCCCTGCTAGTGGCCAGAATGCCGAGCAATTCGCTGCGGACTTGCCGCCCATCGAGGACGAGTAA |
| Length | 1419 |
Gene
| Sequence id | CC1G_02860T0 |
|---|---|
| Sequence |
>CC1G_02860T0 ATGAAGCTTCTCCTACCTGTCGTCCTCCTTCAACTATGGCTTGTCAATGCAATGAGCTTGGTTGCACGCAACAAC CGATCCTCTAGCTTTGTCACGGTCAAAGACGGTCGGTTCAGTTTGGACAACCAGTCCGTTCGCTCTCAGATTCTC GTGCTAGTTCAAGATTCTAAACTTCCTCGTCAGGCTGTTCCGCTTCTATGGAACGAACGCGTATTGGATTCAAAT GACGACGGACGACGACATGGAGAACACCTTCCACGCCATTGCTACCGCGGGCTACAACGTTGTTCGCACTTGGGC TTTCAACGATGTCCCTAGCAAGCCTGCGTCGGGTCCTTACTTCCAGGTAATCGACCACCCTTCTGGCTCCGAATT TCGATTAATCCTTGCTAGGTTCTCAATAGCAACGGCGGCACCATCAACGAGGGCAACGACGGCCTCAAGCGCCTG GACAAGGCGGTGTCGTTGGCTCAGAAATACGGAATCAAGCTGCTCCTCAGTCTCACCAACAACTGGAATCCTGAA CGCCCTGTCCCAAACACCGCCTGGAACCGCCGCGCCAACACGAGGGAACTTCCAAGAGGATACCTTTCGAACGAC TATGGTACGCACACATACATTTATTGAAAAATCTCAAGGAGCATGGTGCTCATTCTTATAAAGGGGGAATGGATG CTTATGTCCGTGCCTTCCGTCCAAACGGGACTCACGACTCGTTCTACACCGATGGCACCATCATTGAAGCTTTTA AGAATTACGTGTCTCATGTTGTAAAGCGTTACGCTAACAGCCCCGCCGTGCTCGCCTGGGAGCTGGGTAACGACT TGAGGTGCTCGTCAACTCTCCCAGCGTCTAACAACTGTAACACTGGAACTATTACCAACTGGACGGCGGACATCT GTAAGTGGCTCATGTTCATTTCGGACTTTCCATCCGATTTCTGACTCTTGTTGCAGCCAGCTTTATCAAGTCTAT TGACTCCAATCACCTTATCACTGCAGGGTAAGAGTTTCCGCCGGATCGATAACGTGCAACGAGGCCGATTATTCG TTTCATTATAGTGACGGTGGCTTTTACTGTTTGAAATGCCCCAAGAGATTCGCAAAGGACTTCACCAAACCCACC TCATCTCTTCCCGGCAGCGCTTTCGACGGGTCCTACGGCGTTGATACAGAGGACATTCTTGCCATCCCTTCCATT GACTTCGGATCTTTGTAAGTCATGGTCCTCGTTTACAAAGTCTCCATCGTTTCTCACCTTCATGTTTGCGCCCAC ACATAGCCAACTCTTCCCCGATCAGGTGAACTACTTCCCTACCGTCGATGACTCGTTCGCTACAAAGGCTATCGG CGATGGTGGCAAATGGATTTCGGCCCATTCCAACACTGCATCCAGGTACGCCTTCTTTCGGCTTGATTGGGGCTC GATCCTGGGGACCTGAGCGCTTAACTATTGTTAGGCTTGGCAAGCCGGAAGCGCTCACTGCAGCTTCCATTCTTG GCAAGGAGAACTACTCCTCTTTCGCCCCATTCAACTCGACCTCCCAGATCCCTGACGGTACACCCTGCGGTAATT ATCCCTTATCCTGACGAAGGACTGTATTGGAGTCTGACGTTCCTGTGACAGCGGGTGTTGAACCATTCCAGGTCG ACTATGCATTCACCTCATGGGCAGGAGGTACGTAAATCAGCAGAACATGTCTGCCTCATGTGTCAAGTTAACAAT GCCCTCTAGTCGCCCTTCACGGCAACATCGGCGGAGTCCTCGAATATCAGGTACGTCATCACCCCATTATTTTTC ACGTTCGACCGCTTACCTCTTACCTTCAGTGGCAACAAGACGGTCTGACCAGTCACGGAACGATCCACGAGAACT GGGAGAAGAGAGCCCTCACCGAGTCTCCCCAGGATGGCTCTGCTCGGTAAGTGCTAAAATCGCCTTGCCGCACAG CGAACATTTGAGCTCATGGTTCACCGCAGCTACAAAGGCCCTGCTAGTGGCCAGAATGCCGAGCAATTCGCTGCG GACTTGCCGCCCATCGAGGACGAGTAA |
| Length | 2052 |