CC1G_02946
Coprinopsis cinerea Okoyama 7

General data

Systematic name CC1G_02946 Strain Coprinopsis cinerea A43mutB43mut pab1-1 #326
Standard name - Synonyms
Uniprot id A8NRU6 Functional description CBFD_NFYB_HMF domain-containing protein
Location Chr_8:1343714..1344627 Strand -
Gene length (nt) 914 Transcript length (nt) 738
CDS length (nt) 738 Protein length (aa) 245

Reciprocal best hits in model fungi

Strain name Gene / Protein name
No records

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Schizophyllum commune H4-8 Schco3_2614728 46.5 3.657E-46 166
Hypsizygus marmoreus strain 51987-8 Hypma_RDB17967 51.8 1.851E-45 164
Agrocybe aegerita Agrae_CAA7261434 47.3 9.985E-42 153
Lentinula edodes NBRC 111202 Lenedo1_1043331 45.8 5.347E-39 145
Lentinula edodes W1-26 v1.0 Lentinedodes1_12666 45.8 5.306E-39 145
Grifola frondosa Grifr_OBZ69003 45.3 5.246E-38 142
Lentinula edodes B17 Lened_B_1_1_583 44.1 2.197E-37 140
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_193750 39.7 6.887E-30 118
Ganoderma sp. 10597 SS1 v1.0 Gansp1_117121 40.5 8.543E-30 118
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_113914 38.8 4.312E-24 101
Pleurotus ostreatus PC15 PleosPC15_2_169408 41.3 2.56E-18 84
Pleurotus ostreatus PC9 PleosPC9_1_107538 41.3 5.417E-18 83
Pleurotus eryngii ATCC 90797 Pleery1_546724 42.7 1.406E-17 82

Expression

Name Summary Attribution Assay type
Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea Plaza et al. 2016 RNA-seq
Sample Mean cpm SD cpm Se of mean
O7 + PBS 11.3923 2.5535 1.4743
O7 + A. avenae 10.3938 1.9963 1.1526
O7 + C. elegans 11.1662 4.175 2.4104
O7 + mechanical damage 13.8083 3.1657 1.8277
O7 + E. coli 12.2132 0.6412 0.3702
O7 + B. subtilis 13.196 1.8235 1.0528

General data

Systematic name -
Protein id 2547
Description CBFD_NFYB_HMF domain-containing protein

Annotation summary

0 100 200 245

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
Pfam PF00808 Histone-like transcription factor (CBF/NF-Y) and archaeal histone IPR003958 120 180

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR009072 Histone-fold
IPR003958 Transcription factor CBF/NF-Y/archaeal histone domain

GO

Go id Term Ontology
GO:0046982 protein heterodimerization activity MF

KEGG

KEGG Orthology
K03004
K03506

EggNOG

COG category Description
K Histone-like transcription factor (CBF/NF-Y) and archaeal histone

CAZy

Class Family Subfamily
No records

Transcription factor

Group
histone fold

Conservation of CC1G_02946 across fungi.

Arrow shows the origin of gene family containing CC1G_02946.

Protein

Sequence id 2547
Sequence >2547
MSSSPISSPINKNHASMEEDKPMNDTLVDEEGDVVQFEDEDESQFPEEDEPQFPDEDEAQFPEEEEDAMDVDEPP
PPEVEAGKGGKTKAAKTTATTSSTSKPKKKKEAQTLEREPGKSLLPLARVQKIIKADKDIPIVAKDATFLISLAT
EEFIRRITEAGARVANRENRTTVQGRDIASVAKRVDEFLFLDDILPFVSAEPKRQNKVKDMISAVAPLKGAPTAL
EQFVGKKGQQQESNNHEEEG
Length 245

Coding

Sequence id CC1G_02946T0
Sequence >CC1G_02946T0
ATGTCCTCTTCACCGATATCATCACCCATTAACAAGAATCACGCGTCAATGGAAGAGGACAAGCCCATGAACGAC
ACACTGGTGGACGAGGAGGGGGATGTAGTCCAGTTTGAAGACGAAGATGAATCACAGTTTCCGGAAGAGGACGAA
CCACAGTTTCCAGATGAAGATGAGGCGCAGTTTCCGGAGGAGGAGGAAGATGCGATGGATGTGGACGAACCGCCG
CCTCCAGAGGTAGAGGCAGGGAAGGGCGGAAAGACCAAGGCGGCCAAGACGACGGCGACAACGAGTTCAACATCC
AAACCGAAGAAGAAGAAGGAAGCGCAGACGCTTGAGAGAGAACCTGGAAAATCGTTACTCCCTCTTGCGCGTGTT
CAGAAAATCATTAAAGCGGATAAAGATATACCCATAGTAGCTAAAGACGCTACGTTCCTCATTTCATTGGCAACT
GAGGAGTTCATTAGACGGATAACGGAGGCTGGGGCGAGGGTCGCCAATCGAGAGAATAGGACGACTGTGCAAGGA
CGGGATATAGCGAGCGTAGCGAAACGCGTGGATGAATTTCTTTTCCTTGACGATATTTTGCCTTTCGTTTCGGCA
GAACCTAAACGACAAAACAAAGTAAAGGATATGATTTCAGCTGTGGCGCCGTTGAAGGGTGCTCCAACTGCTTTG
GAACAGTTTGTTGGGAAGAAGGGGCAACAACAGGAAAGCAATAATCATGAGGAGGAAGGA
Length 738

Transcript

Sequence id CC1G_02946T0
Sequence >CC1G_02946T0
ATGTCCTCTTCACCGATATCATCACCCATTAACAAGAATCACGCGTCAATGGAAGAGGACAAGCCCATGAACGAC
ACACTGGTGGACGAGGAGGGGGATGTAGTCCAGTTTGAAGACGAAGATGAATCACAGTTTCCGGAAGAGGACGAA
CCACAGTTTCCAGATGAAGATGAGGCGCAGTTTCCGGAGGAGGAGGAAGATGCGATGGATGTGGACGAACCGCCG
CCTCCAGAGGTAGAGGCAGGGAAGGGCGGAAAGACCAAGGCGGCCAAGACGACGGCGACAACGAGTTCAACATCC
AAACCGAAGAAGAAGAAGGAAGCGCAGACGCTTGAGAGAGAACCTGGAAAATCGTTACTCCCTCTTGCGCGTGTT
CAGAAAATCATTAAAGCGGATAAAGATATACCCATAGTAGCTAAAGACGCTACGTTCCTCATTTCATTGGCAACT
GAGGAGTTCATTAGACGGATAACGGAGGCTGGGGCGAGGGTCGCCAATCGAGAGAATAGGACGACTGTGCAAGGA
CGGGATATAGCGAGCGTAGCGAAACGCGTGGATGAATTTCTTTTCCTTGACGATATTTTGCCTTTCGTTTCGGCA
GAACCTAAACGACAAAACAAAGTAAAGGATATGATTTCAGCTGTGGCGCCGTTGAAGGGTGCTCCAACTGCTTTG
GAACAGTTTGTTGGGAAGAAGGGGCAACAACAGGAAAGCAATAATCATGAGGAGGAAGGATAG
Length 738

Gene

Sequence id CC1G_02946T0
Sequence >CC1G_02946T0
ATGTCCTCTTCACCGATATCATCACCCATTAACAAGAATCACGCGTCAATGGAAGAGGACAAGCCCATGAACGAC
ACACTGGTGGACGAGGAGGGGGATGTAGTCCAGTTTGAAGACGAAGATGAATCACAGTTTCCGGAAGAGGACGAA
CCACAGTTTCCAGATGAAGATGAGGCGCAGTTTCCGGAGGAGGAGGAAGATGCGATGGATGTGGACGAACCGCCG
CCTCCAGAGGTAGAGGCAGGGAAGGGCGGAAAGACCAAGGCGGCCAAGACGACGGCGACAACGAGTTCAACATCC
AAACCGAAGAAGAAGAAGGAAGCGCAGACGCTTGAGAGAGAACCTGGAAAATCGTTACTCCCTCTTGCGCGTGTT
CAGAAAATCATTAAAGCGGATAAAGTGCGTTTTGGTACCGTCAGGTTCGGCGACGAGAGCTAATGAGATTGTTTA
GGATATACCCATAGTAGCTAAAGACGCTACGTTCCTCATTTCATTGGCAACTGAGGAGTTCATTAGACGGATAAC
GGAGGCTGGGGCGAGGGTCGCCAATCGAGAGAATAGGACGACTGTGCAAGGACGGGATATAGGTACATTATCCTT
CTCCTCCGGGTGGTGTCAGTGCTGATTATAGTATAGCGAGCGTAGCGAAACGCGTGGATGAATTTCTTTTCCTTG
ACGGTAAGCACTTGCAGTTGCGGTTAAGAATGAACACGGTGTCTAACGCGTTCATTGACTTCGTCTCGTTGCATA
TAGATATTTTGCCTTTCGTTTCGGCAGAACCTAAACGACAAAACAAAGTAAAGGATATGATTTCAGCTGTGGCGC
CGTTGAAGGGTGCTCCAACTGCTTTGGAACAGTTTGTTGGGAAGAAGGGGCAACAACAGGAAAGCAATAATCATG
AGGAGGAAGGATAG
Length 914