CC1G_03299
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_03299 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8N7F6 | Functional description | Phytanoyl-CoA dioxygenase |
| Location | Chr_3:2792345..2794064 | Strand | - |
| Gene length (nt) | 1720 | Transcript length (nt) | 1071 |
| CDS length (nt) | 918 | Protein length (aa) | 305 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| Aspergillus nidulans | AN4647 |
| Neurospora crassa | NCU04228 |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_116635 | 80.6 | 1.2E-165 | 514 |
| Agrocybe aegerita | Agrae_CAA7260602 | 80.8 | 1.627E-165 | 514 |
| Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_196096 | 80.6 | 5.685E-165 | 512 |
| Pleurotus eryngii ATCC 90797 | Pleery1_1460039 | 77.1 | 1.768E-155 | 485 |
| Hypsizygus marmoreus strain 51987-8 | Hypma_RDB16916 | 78.4 | 2.262E-154 | 482 |
| Lentinula edodes NBRC 111202 | Lenedo1_1103790 | 76 | 2.529E-151 | 473 |
| Lentinula edodes W1-26 v1.0 | Lentinedodes1_17934 | 75 | 6.107E-150 | 469 |
| Grifola frondosa | Grifr_OBZ68101 | 75.9 | 6.181E-149 | 466 |
| Pleurotus ostreatus PC15 | PleosPC15_2_1013434 | 76.4 | 4.492E-143 | 449 |
| Pleurotus ostreatus PC9 | PleosPC9_1_50162 | 73.5 | 4.815E-142 | 446 |
| Flammulina velutipes | Flave_chr07AA00306 | 70 | 3.756E-137 | 432 |
| Ganoderma sp. 10597 SS1 v1.0 | Gansp1_127165 | 71.8 | 8.291E-137 | 431 |
| Schizophyllum commune H4-8 | Schco3_2631857 | 60.7 | 6.701E-124 | 394 |
| Auricularia subglabra | Aurde3_1_158341 | 66.1 | 2.538E-121 | 387 |
| Lentinula edodes B17 | Lened_B_1_1_2286 | 71.6 | 7.355E-50 | 179 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 2857 |
| Description | Phytanoyl-CoA dioxygenase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF05721 | Phytanoyl-CoA dioxygenase (PhyH) | IPR008775 | 13 | 264 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR008775 | Phytanoyl-CoA dioxygenase-like |
GO
| Go id | Term | Ontology |
|---|---|---|
| No records | ||
KEGG
| KEGG Orthology |
|---|
| No records |
EggNOG
| COG category | Description |
|---|---|
| I | Phytanoyl-CoA dioxygenase (PhyH) |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| AA | AA3 | AA3_2 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_03299 across fungi.
Arrow shows the origin of gene family containing CC1G_03299.
Protein
| Sequence id | 2857 |
|---|---|
| Sequence |
>2857 MPEYLSQEQIDQFNKNGYLVLPSFLSEEETSALRKRSKELLDEFDPSTHPLTKFTTGDDDHVGDDYFLTSGDKIR YFLETDAVDGDGKLNREKQKAVNKIGHGLHELDPLFRKVTLENERIRAVVRDLKFHRDPVALQSMVITKQPQIGG EVPEHNDSTFLYTDPPSALGFWIALEKCTESNGALSFLPGSHKTTPITKRFVRLGPGKGTGFETLVSPEEEKRVA EEGKKGEYTLETCNPGDLVLIHGSVLHKSERNTSPNTRFAYTFHMIESPPYANYDEKNWLQPTPEMPFSRILPPG EINVF |
| Length | 305 |
Coding
| Sequence id | CC1G_03299T0 |
|---|---|
| Sequence |
>CC1G_03299T0 ATGCCAGAATATCTCAGTCAAGAACAGATTGACCAGTTCAATAAGAACGGATATCTCGTTCTGCCGTCATTCTTG TCGGAAGAAGAGACATCCGCGTTGCGGAAGCGCTCTAAGGAGCTGCTGGACGAATTTGACCCTTCTACCCACCCT CTGACCAAGTTCACGACAGGAGACGATGACCACGTCGGAGACGACTATTTCCTGACGTCTGGTGACAAGATACGC TATTTCTTGGAAACGGACGCGGTGGATGGAGATGGAAAGTTGAACAGGGAAAAGCAGAAAGCTGTGAATAAGATT GGACATGGCTTGCACGAGCTTGACCCTCTCTTCCGGAAAGTGACTTTGGAGAATGAACGCATTAGAGCTGTGGTT AGGGATTTGAAGTTCCATCGGGATCCTGTTGCTCTCCAGTCGATGGTAATCACGAAGCAGCCGCAGATTGGTGGC GAAGTGCCTGAGCATAATGACTCGACATTCCTGTACACAGACCCACCATCCGCCCTCGGCTTCTGGATCGCCCTC GAGAAATGCACAGAATCCAACGGAGCCCTGTCTTTCCTTCCCGGATCGCACAAGACCACGCCAATCACCAAACGT TTCGTTCGTCTCGGGCCTGGAAAGGGTACGGGGTTCGAGACGTTGGTCTCACCCGAGGAAGAGAAACGTGTGGCT GAGGAGGGCAAGAAGGGGGAATATACCTTGGAGACTTGCAATCCAGGCGATTTGGTCCTCATCCATGGCTCGGTG CTGCACAAATCGGAGAGGAACACGAGTCCCAATACGAGGTTTGCGTATACCTTCCATATGATCGAGTCGCCGCCC TATGCAAATTATGACGAGAAGAATTGGTTGCAGCCTACACCCGAGATGCCGTTCTCGAGGATCCTGCCTCCGGGG GAGATCAACGTGTTC |
| Length | 918 |
Transcript
| Sequence id | CC1G_03299T0 |
|---|---|
| Sequence |
>CC1G_03299T0 ACAATGCCAGAATATCTCAGTCAAGAACAGATTGACCAGTTCAATAAGAACGGATATCTCGTTCTGCCGTCATTC TTGTCGGAAGAAGAGACATCCGCGTTGCGGAAGCGCTCTAAGGAGCTGCTGGACGAATTTGACCCTTCTACCCAC CCTCTGACCAAGTTCACGACAGGAGACGATGACCACGTCGGAGACGACTATTTCCTGACGTCTGGTGACAAGATA CGCTATTTCTTGGAAACGGACGCGGTGGATGGAGATGGAAAGTTGAACAGGGAAAAGCAGAAAGCTGTGAATAAG ATTGGACATGGCTTGCACGAGCTTGACCCTCTCTTCCGGAAAGTGACTTTGGAGAATGAACGCATTAGAGCTGTG GTTAGGGATTTGAAGTTCCATCGGGATCCTGTTGCTCTCCAGTCGATGGTAATCACGAAGCAGCCGCAGATTGGT GGCGAAGTGCCTGAGCATAATGACTCGACATTCCTGTACACAGACCCACCATCCGCCCTCGGCTTCTGGATCGCC CTCGAGAAATGCACAGAATCCAACGGAGCCCTGTCTTTCCTTCCCGGATCGCACAAGACCACGCCAATCACCAAA CGTTTCGTTCGTCTCGGGCCTGGAAAGGGTACGGGGTTCGAGACGTTGGTCTCACCCGAGGAAGAGAAACGTGTG GCTGAGGAGGGCAAGAAGGGGGAATATACCTTGGAGACTTGCAATCCAGGCGATTTGGTCCTCATCCATGGCTCG GTGCTGCACAAATCGGAGAGGAACACGAGTCCCAATACGAGGTTTGCGTATACCTTCCATATGATCGAGTCGCCG CCCTATGCAAATTATGACGAGAAGAATTGGTTGCAGCCTACACCCGAGATGCCGTTCTCGAGGATCCTGCCTCCG GGGGAGATCAACGTGTTCTAGGTGCTCCTTCGACAACGGTCCTGCGGGTGGTAGGATATGAAGAAGCAAGTGACG GAATCTTTTGTGTTACAACAGTTTGGTGTTAGCGGTATAGCAACAGTGTGGTATCTCTGTGTTAAATAGGTATTA TCTAAATGGAATCAGCGTCAC |
| Length | 1071 |
Gene
| Sequence id | CC1G_03299T0 |
|---|---|
| Sequence |
>CC1G_03299T0 ACAATGCCAGAATATCTCAGTCAAGAACAGATTGACCAGGCATGCAACGTATTCCCTGTTGGATCAATGGACGAC TGACTCTCGACTCGGATTTGCAGTTCAATAAGAACGGGTATGGTTCGTCTGGTAGTTGATACTGGAGAACGTCTG AACTGATGTAAAGCGAAGATATCTCGTTCTGCCGTCATTCTTGTCGGAAGAAGAGACATCCGCGTTGCGGAAGCG CTCTAAGGAGCTGCTGGACGAATTTGACCCTTCTACCCACCCTCTGGTATGATCCGCCGACGTACTTCGTCGACA TGAACTCACATTTAAGTCTATGGGTTTGCAGACCAAGTTCACGACAGGAGACGATGACCACGTCGGAGACGACTA TTTCCTGACGTCTGGTGACAAGATGTCAGAGTTCATCTACCTCGATTATTCGAAAGTCTCTGCTGACGCGGGTTG TAGACGCTATTTCTTGGAAACGGACGCGGTGGATGGAGATGGAAAGTTGAACAGGGAAAAGCAGAAAGCTGTGAA TAAGATTGGACATGGTGCGTTTATCCGATCCTTGCTTTGTCCATTGCTGGTTACCTGACCCGTCCCTACGTTGAA TCCAAGGCTTGCACGAGCTTGACCCTCTCTTCCGGAAAGTGACTTTGGAGAATGAACGCATTAGAGCTGTGGTTA GGGATTTGAAGTTCCATCGGGATCCTGTTGGTATGTCTGCGTCACCAAGGCAAGGACGAATGTAACTGATGCGGA TGTCTTGGACGGAATTCAGCTCTCCAGTCGATGGTAATCACGAAGCAGCCGCAGATTGGTGGCGAAGGTACGCTC CTTCTTGTGAGGTTGCTCGAAATTGCGATGCTGACCTCAAGGGATGGACTGTAGTGCCTGAGCATAATGACTCGT AGGTAACCTTTCTCTCACCCTGCGCAAATCAGTGCATTGAATTCGCATCCTTCGCAGGACATTCCTGGTAAGCTC TCAACATCCCGATCTATCTTCTCCCCAGCCCCTCAGGCTTACTTAACAACACACTCCGACACCTCCAAACAGTAC ACAGACCCACCATCCGCCCTCGGCTTCTGGATCGCCCTCGAGAAATGCACAGAATCCAACGGAGCCCTGTCTTTC CTTCCCGGATCGCACAAGACCACGCCAATCACCAAACGTTTCGTTCGTCTCGGGCCTGGAAAGGGTACGGGGTTC GAGACGTTGGTCTCACCCGAGGAAGAGAAACGTGTGGCTGAGGAGGGCAAGAAGGGGGAATATACCTTGGAGACT TGCAATCCAGGTGGGTCTTTCTTATCTCGGCTGTACGGGTTGAAGTTGTAGCTGACGATGATTGGGTGAATGGAC GAATTTTCACATTGTTGTTGTAGGCGATTTGGTCCTCATCCATGGCTCGGTGCTGCACAAATCGGAGAGGAACAC GAGTCCCAATACGAGGTTTGCGTATACCTTCCATATGATCGAGTCGCCGCCCTATGCAAATTATGACGAGAAGAA TTGGTTGCAGCCTACACCCGAGATGCCGTTCTCGAGGATCCTGCCTCCGGGGGAGATCAACGTGTTCTAGGTGCT CCTTCGACAACGGTCCTGCGGGTGGTAGGATATGAAGAAGCAAGTGACGGAATCTTTTGTGTTACAACAGTTTGG TGTTAGCGGTATAGCAACAGTGTGGTATCTCTGTGTTAAATAGGTATTATCTAAATGGAATCAGCGTCAC |
| Length | 1720 |