CC1G_04165
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_04165 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8NW80 | Functional description | Cytoplasmic protein |
| Location | Chr_4:3521026..3523265 | Strand | + |
| Gene length (nt) | 2240 | Transcript length (nt) | 1611 |
| CDS length (nt) | 1611 | Protein length (aa) | 536 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| Saccharomyces cerevisiae | YBR056W_YBR056W |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Agrocybe aegerita | Agrae_CAA7270598 | 50.4 | 7.417E-163 | 520 |
| Hypsizygus marmoreus strain 51987-8 | Hypma_RDB15978 | 50.8 | 6.011E-157 | 503 |
| Schizophyllum commune H4-8 | Schco3_2495155 | 46.2 | 2.728E-146 | 472 |
| Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_69695 | 45.9 | 6.36E-140 | 453 |
| Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_205367 | 45.5 | 1.448E-138 | 449 |
| Flammulina velutipes | Flave_chr02AA00152 | 46.1 | 1.346E-131 | 429 |
| Grifola frondosa | Grifr_OBZ65555 | 44.2 | 1.537E-129 | 423 |
| Ganoderma sp. 10597 SS1 v1.0 | Gansp1_57596 | 54.1 | 1.05E-123 | 406 |
| Lentinula edodes W1-26 v1.0 | Lentinedodes1_15094 | 36.8 | 2.476E-97 | 329 |
| Lentinula edodes NBRC 111202 | Lenedo1_1164141 | 36.4 | 2.628E-96 | 326 |
| Lentinula edodes B17 | Lened_B_1_1_13392 | 35.6 | 2.193E-76 | 267 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||||||
General data
| Systematic name | - |
|---|---|
| Protein id | 3625 |
| Description | Cytoplasmic protein |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| No records | |||||
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR017853 | Glycoside hydrolase superfamily |
GO
| Go id | Term | Ontology |
|---|---|---|
| No records | ||
KEGG
| KEGG Orthology |
|---|
| K01210 |
EggNOG
| COG category | Description |
|---|---|
| G | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| GH | GH5 | GH5_50 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_04165 across fungi.
Arrow shows the origin of gene family containing CC1G_04165.
Protein
| Sequence id | 3625 |
|---|---|
| Sequence |
>3625 MQAKVAVHVHKVTSTHFGAPTTIPATKFNEMRRFFQGFKSDVDKFKDQVQEHVAQFSPGDVSSPGVEDFDEHESE HTKIFPVRQEDLLKYRKHRGVNLGSWFVLERWITDSPFREAAAPAASDLDVAKGRNAKSILERHWDTWIQPADWD WIAARGINSVRIPIGYYHVCGADRSILDGTDFWPFYDVYQGAWRRITNAILEANKRGITVQLAPGKQNADPHSGT SNPANFFHDPHNLRRGLYALQSLSMHLTSFLNSHDPPLSNVVSIELVNEPAPPNDGVLKRWYDDAIRVVQRGARG VPVYIGECWRPEVYAEYVARELKQEDPEGLVVLDHHLYRCFTQEDINTSVYDHTGRLRDHNGILSTFTRVAELVG RAGGALSVCEWSGGLNEGSLKHVRGEDQRRNARRDFLRAQLELYERTCAGWYFWTYKKEYRGDVGWSFREAVEEG VFPMKNGRIDAGILVRKKRWTDADVERECVRRVGKMEEERKKAYDAHRSYWSRIPGRYEHRRFWYGFTAGWNMAW RFYDSIEPDGE |
| Length | 536 |
Coding
| Sequence id | CC1G_04165T0 |
|---|---|
| Sequence |
>CC1G_04165T0 ATGCAAGCCAAGGTCGCAGTTCACGTTCACAAGGTCACCTCAACTCACTTCGGAGCGCCAACCACTATCCCTGCG ACCAAATTCAACGAGATGCGCCGATTTTTCCAAGGATTCAAGAGCGACGTTGATAAATTCAAGGACCAAGTGCAA GAACACGTTGCCCAGTTCAGTCCAGGAGATGTATCCTCCCCCGGGGTAGAAGATTTCGACGAGCACGAATCGGAA CACACCAAGATCTTCCCCGTCCGACAAGAGGATTTGTTGAAGTACCGGAAACATCGTGGAGTAAACCTCGGCTCG TGGTTCGTCCTCGAACGCTGGATAACAGATTCACCCTTCCGCGAAGCAGCAGCACCCGCAGCGAGCGATCTGGAC GTCGCGAAAGGCCGAAACGCCAAATCCATTTTGGAACGACATTGGGATACGTGGATCCAACCGGCGGACTGGGAC TGGATTGCTGCGAGGGGTATTAATTCTGTCCGGATTCCTATTGGGTATTATCATGTATGCGGAGCGGATAGGAGT ATACTCGACGGGACGGACTTTTGGCCGTTTTATGATGTGTACCAGGGCGCGTGGAGGAGGATTACGAATGCCATC CTCGAGGCGAACAAGCGCGGTATAACCGTCCAACTCGCCCCAGGAAAACAAAACGCCGACCCGCACTCCGGCACC TCCAACCCCGCCAACTTCTTCCACGACCCGCACAACCTCCGTCGGGGCCTCTACGCTCTGCAGTCCCTCTCCATG CACCTCACGTCTTTCCTCAACAGCCACGACCCGCCCCTCTCCAACGTCGTCTCCATCGAATTGGTCAACGAACCT GCACCGCCTAACGATGGTGTGCTGAAGCGGTGGTACGACGATGCGATAAGGGTTGTGCAGAGGGGTGCGCGTGGC GTGCCGGTATATATTGGGGAGTGTTGGAGGCCGGAGGTGTATGCTGAGTATGTGGCGAGGGAGCTGAAGCAGGAG GATCCAGAAGGCCTAGTAGTACTAGACCACCACCTCTACCGTTGCTTCACCCAAGAAGACATCAACACATCCGTC TACGACCACACCGGGCGGCTGCGCGACCACAACGGCATACTCTCGACCTTTACGCGCGTCGCTGAGCTCGTGGGT CGAGCCGGCGGGGCGCTATCCGTGTGCGAGTGGTCTGGCGGTCTCAATGAGGGGAGTTTGAAGCATGTGCGTGGG GAGGACCAACGGAGGAATGCGAGACGTGATTTTTTGAGAGCGCAGTTGGAGTTGTATGAGCGGACGTGTGCGGGG TGGTATTTTTGGACGTATAAGAAGGAGTATAGGGGTGATGTGGGGTGGTCGTTTAGGGAGGCGGTGGAGGAGGGG GTGTTTCCTATGAAGAATGGACGAATTGACGCTGGTATTTTGGTGAGGAAGAAGAGGTGGACGGATGCGGATGTG GAAAGGGAATGTGTGCGTAGGGTGGGGAAGATGGAGGAGGAGAGGAAGAAGGCGTATGATGCACATAGATCCTAC TGGTCCCGCATCCCGGGGCGCTACGAGCACCGCAGGTTCTGGTATGGTTTTACAGCTGGGTGGAATATGGCGTGG AGGTTTTATGATTCTATCGAACCGGATGGTGAG |
| Length | 1611 |
Transcript
| Sequence id | CC1G_04165T0 |
|---|---|
| Sequence |
>CC1G_04165T0 ATGCAAGCCAAGGTCGCAGTTCACGTTCACAAGGTCACCTCAACTCACTTCGGAGCGCCAACCACTATCCCTGCG ACCAAATTCAACGAGATGCGCCGATTTTTCCAAGGATTCAAGAGCGACGTTGATAAATTCAAGGACCAAGTGCAA GAACACGTTGCCCAGTTCAGTCCAGGAGATGTATCCTCCCCCGGGGTAGAAGATTTCGACGAGCACGAATCGGAA CACACCAAGATCTTCCCCGTCCGACAAGAGGATTTGTTGAAGTACCGGAAACATCGTGGAGTAAACCTCGGCTCG TGGTTCGTCCTCGAACGCTGGATAACAGATTCACCCTTCCGCGAAGCAGCAGCACCCGCAGCGAGCGATCTGGAC GTCGCGAAAGGCCGAAACGCCAAATCCATTTTGGAACGACATTGGGATACGTGGATCCAACCGGCGGACTGGGAC TGGATTGCTGCGAGGGGTATTAATTCTGTCCGGATTCCTATTGGGTATTATCATGTATGCGGAGCGGATAGGAGT ATACTCGACGGGACGGACTTTTGGCCGTTTTATGATGTGTACCAGGGCGCGTGGAGGAGGATTACGAATGCCATC CTCGAGGCGAACAAGCGCGGTATAACCGTCCAACTCGCCCCAGGAAAACAAAACGCCGACCCGCACTCCGGCACC TCCAACCCCGCCAACTTCTTCCACGACCCGCACAACCTCCGTCGGGGCCTCTACGCTCTGCAGTCCCTCTCCATG CACCTCACGTCTTTCCTCAACAGCCACGACCCGCCCCTCTCCAACGTCGTCTCCATCGAATTGGTCAACGAACCT GCACCGCCTAACGATGGTGTGCTGAAGCGGTGGTACGACGATGCGATAAGGGTTGTGCAGAGGGGTGCGCGTGGC GTGCCGGTATATATTGGGGAGTGTTGGAGGCCGGAGGTGTATGCTGAGTATGTGGCGAGGGAGCTGAAGCAGGAG GATCCAGAAGGCCTAGTAGTACTAGACCACCACCTCTACCGTTGCTTCACCCAAGAAGACATCAACACATCCGTC TACGACCACACCGGGCGGCTGCGCGACCACAACGGCATACTCTCGACCTTTACGCGCGTCGCTGAGCTCGTGGGT CGAGCCGGCGGGGCGCTATCCGTGTGCGAGTGGTCTGGCGGTCTCAATGAGGGGAGTTTGAAGCATGTGCGTGGG GAGGACCAACGGAGGAATGCGAGACGTGATTTTTTGAGAGCGCAGTTGGAGTTGTATGAGCGGACGTGTGCGGGG TGGTATTTTTGGACGTATAAGAAGGAGTATAGGGGTGATGTGGGGTGGTCGTTTAGGGAGGCGGTGGAGGAGGGG GTGTTTCCTATGAAGAATGGACGAATTGACGCTGGTATTTTGGTGAGGAAGAAGAGGTGGACGGATGCGGATGTG GAAAGGGAATGTGTGCGTAGGGTGGGGAAGATGGAGGAGGAGAGGAAGAAGGCGTATGATGCACATAGATCCTAC TGGTCCCGCATCCCGGGGCGCTACGAGCACCGCAGGTTCTGGTATGGTTTTACAGCTGGGTGGAATATGGCGTGG AGGTTTTATGATTCTATCGAACCGGATGGTGAGTAA |
| Length | 1611 |
Gene
| Sequence id | CC1G_04165T0 |
|---|---|
| Sequence |
>CC1G_04165T0 ATGCAAGCCAAGGTCGCAGTTCACGTTCACAAGTTTGAGACAGATCTTTTGTTTTTTCTTTATCGCCCTTATCGT CCACTGTTGTTCGTTGAACATTGAACGTTGAACGCGGCGACGAGGGCTTCTTGTGTACCTCGAACATCTCTACGT CGGGCTTCTTGTTTTTCGACATCTCTCCTTGATATACGCCTTCTTCAACACATCCTCGTTCCAGGGTCACCTCAA CTCACTTCGGAGCGCCAACCACTATCCCTGCGACCAAATTCAACGAGATGCGCCGATTTTTCCAAGGATTCAAGA GCGACGTTGATAAATTCAAGGACCAAGTGCAAGAACACGTTGCCCAGTTCAGTCCAGGAGATGTATCCTCCCCCG GGGTAGAAGATTTCGACGAGCACGAATCGGAACACACCAAGATCTTCCCCGTCCGACAAGAGGATTTGTTGAAGT ACCGGAAACATCGTGGAGTAAACCTCGGTGCGTCGTCTTGATCGTCTTGCCATGAACATGCACCCAACTCTCCTC ATTCTCCTCCCTATGGACGTGCAGGCTCGTGGTTCGTCCTCGAACGCTGGATAACAGATTCACCCTTCCGCGAAG CAGCAGCACCCGCAGCGAGCGATCTGGACGTCGCGAAAGGCCGAAACGCCAAATCCATTTTGGAACGACATTGGG ATACGTGGATCCAACCGGCGGACTGGGACTGGATTGCTGCGAGGGGTATTAATTCTGTCCGGATTCCTGTACGTG GCTTCTCTTTGTCTGTGGTGACCTCGGTCTGTTCGTATGCTAACTGATGAAATGAGTAGATTGGGTATTATCATG TATGCGGAGCGGATAGGAGTATACTCGACGGGACGGACTTTTGGCCGTTTTATGATGTGTACCAGGGCGCGTGGA GGAGGATTACGAATGCCATCCTCGAGGCGAACAAGCGCGGTATAACCGTCCAACTCGGTACGTTCCCCATCCCAT CCCATCCCTCCCTCCCTTCCCTCCTGACAAGACTGGACTCCAGACATGCACGCAGCCCCAGGAAAACAAAACGCC GACCCGCACTCCGGCACCTCCAACCCCGCCAACTTCTTCCACGACCCGCACAACCTCCGTCGGGGCCTCTACGCT CTGCAGTCCCTCTCCATGCACCTCACGTCTTTCCTCAACAGCCACGACCCGCCCCTCTCCAACGTCGTCTCCATC GAATTGGTCAACGAACCTGCACCGCCTAACGATGGTGTGCTGAAGCGGTGGTACGACGATGCGATAAGGGTTGTG CAGAGGGGTGCGCGTGGCGTGCCGGTATATATTGGGGAGTGTTGGAGGCCGGAGGTGTATGCTGAGTATGTGGCG AGGGAGCTGAAGCAGGAGGATCCAGAAGGCCTAGTAGTACTAGACCACCACCTCTACCGTTGCTTCACCCAAGAA GACATCAACACATCCGTCTACGACCACACCGGGCGGCTGCGCGACCACAACGGCATACTCTCGACCTTTACGCGC GTCGCTGAGCTCGTGGGTCGAGCCGGCGGGGCGCTATCCGTGTGCGAGTGGTCTGGCGGTCTCAATGAGGGGAGT TTGAAGCATGTGCGTGGGGAGGACCAACGGAGGAATGCGAGACGTGATTTTTTGAGAGCGCAGTTGGAGTTGTAT GAGCGGACGTGTGCGGGGTGGTATTTTTGGACGTATAAGAAGGAGTATAGGGGTGATGTGGGGTGGTCGTTTAGG GAGGCGGTGGAGGAGGGGGTGTTTCCTATGAAGAGTGCGTAGTCACGTTTCTGCTTTGTGGTGTTAGAACTGATG GACCTGGGTCGTGCAGATGGACGAATTGACGCTGGTATTTTGGTGAGGAAGAAGAGGTGGACGGATGCGGATGTG GAAAGGGAATGTGTGCGTAGGGTGGGGAAGATGGAGGAGGAGAGGAAGAAGGCGTATGGTAAGTCGTCTTGCGTG TTAGTTGTCATTCGCGTTTGTCCTTTCATATTTGTCCATCCACGTTTGTCCCTTCACTTCTGTCCTTCACTTTGA CCATTCACGCTTGCCCTTCACGCCATCCATCCATACCATCCAATACCCCCAACTAACTAATTCGTCCCTCGTCCC TTCACCCCACAGATGCACATAGATCCTACTGGTCCCGCATCCCGGGGCGCTACGAGCACCGCAGGTTCTGGTATG GTTTTACAGCTGGGTGGAATATGGCGTGGAGGTTTTATGATTCTATCGAACCGGATGGTGAGTAA |
| Length | 2240 |