CC1G_04257
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_04257 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8NFG6 | Functional description | Beta-mannase |
| Location | Chr_2:1561604..1563803 | Strand | + |
| Gene length (nt) | 2200 | Transcript length (nt) | 1497 |
| CDS length (nt) | 1497 | Protein length (aa) | 498 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Pleurotus ostreatus PC15 | PleosPC15_2_1060958 | 55.3 | 1.618E-213 | 667 |
| Pleurotus ostreatus PC9 | PleosPC9_1_75659 | 55.3 | 1.584E-213 | 667 |
| Pleurotus eryngii ATCC 90797 | Pleery1_1461766 | 55.3 | 2.07E-212 | 664 |
| Agrocybe aegerita | Agrae_CAA7271705 | 56.2 | 2.763E-209 | 655 |
| Hypsizygus marmoreus strain 51987-8 | Hypma_RDB21378 | 53.7 | 7.778E-198 | 622 |
| Lentinula edodes NBRC 111202 | Lenedo1_1072271 | 53.2 | 4.894E-192 | 605 |
| Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_190490 | 50.4 | 2.895E-185 | 585 |
| Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_111268 | 50.4 | 6.677E-185 | 584 |
| Lentinula edodes W1-26 v1.0 | Lentinedodes1_8233 | 50.5 | 1.01E-182 | 578 |
| Auricularia subglabra | Aurde3_1_1275343 | 41.4 | 5.279E-124 | 408 |
| Lentinula edodes B17 | Lened_B_1_1_1293 | 57.5 | 1.03E-100 | 339 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 3703 |
| Description | Beta-mannase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00150 | Cellulase (glycosyl hydrolase family 5) | IPR001547 | 50 | 279 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| SP(Sec/SPI) | 1 | 20 | 0.9736 |
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR045053 | Mannan endo-1,4-beta-mannosidase-like |
| IPR001547 | Glycoside hydrolase, family 5 |
| IPR017853 | Glycoside hydrolase superfamily |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
| GO:0071704 | organic substance metabolic process | BP |
KEGG
| KEGG Orthology |
|---|
| K19355 |
EggNOG
| COG category | Description |
|---|---|
| G | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| GH | GH5 | GH5_30 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_04257 across fungi.
Arrow shows the origin of gene family containing CC1G_04257.
Protein
| Sequence id | 3703 |
|---|---|
| Sequence |
>3703 MFVAALWPVALGALAVLATAKPTRTSPLAKRQAPSDIRFVTTDNGRFVVNGAPINFVGTNAYWLHTLNSEQDIDY TLGNISAAGIKIVRTWAFNEVTSVPETGTWFQLIKDDGTVEINEGPNGLQKLDAVVRLAEKHNIYLLLALTNNWS PDPLFDDITIGAGPVRRSDITPPANGSLPRNFLSNDYGGMDTYVRQFGLDNHDEFYTNPKVINAFKNFTATIAKR YTNSPAVFGWELANDARCSSTVGATTCNPKVITKWHSNIAQHIKEVDPNHLVASGIIQDRLAARKRNMKRNKTKG GVKIRGRWTSSDILNIPEISFSSFQLFPDQNEYGQPDPDLSDFENTMQRGVEWIQYHAESALAFGKPATLNGFGL VTQEHVPNYVPFNSSEAPYASDKEQPYGVTNEQRDEAFSTWLNVGFRSGLSSMIHYQWGQTGLTVQPGTTVSQSV PGTGLVENDGITGVSPNDGYSSNGVGRDSVIEVLQESVQEYASDSTLR |
| Length | 498 |
Coding
| Sequence id | CC1G_04257T0 |
|---|---|
| Sequence |
>CC1G_04257T0 ATGTTCGTCGCTGCCCTTTGGCCCGTTGCTCTCGGTGCCCTCGCAGTGCTAGCGACTGCTAAGCCGACGCGAACA TCCCCTCTTGCGAAACGCCAAGCACCATCCGACATTCGGTTCGTTACGACAGATAATGGAAGATTCGTGGTTAAT GGGGCCCCAATCAACTTTGTTGGGACCAATGCCTACTGGCTTCATACCCTGAACTCTGAGCAGGATATTGACTAC ACATTGGGCAACATCTCTGCTGCAGGTATTAAGATAGTCCGCACTTGGGCGTTTAATGAAGTCACGTCTGTCCCT GAGACCGGGACATGGTTCCAGTTAATTAAAGACGACGGGACCGTTGAGATCAACGAGGGACCCAATGGCCTCCAA AAGCTGGACGCAGTCGTGAGGCTGGCTGAAAAGCATAACATCTACTTGCTTTTGGCCCTCACGAACAATTGGAGC CCCGACCCGCTCTTCGACGACATCACGATTGGTGCAGGCCCTGTTCGCCGCTCGGATATCACCCCACCAGCGAAC GGAAGTCTACCGAGAAACTTCCTCAGCAACGACTATGGTGGAATGGATACCTATGTACGACAGTTCGGATTGGAT AATCACGACGAATTCTATACGAACCCCAAAGTTATCAACGCCTTCAAGAATTTTACTGCTACGATTGCTAAACGA TACACCAATAGCCCGGCTGTCTTCGGCTGGGAGCTGGCGAACGACGCGCGCTGCAGCTCAACCGTTGGAGCTACC ACTTGCAATCCAAAGGTTATTACCAAATGGCATTCGAATATCGCCCAACATATCAAGGAAGTAGACCCTAACCAT CTGGTTGCTTCTGGGATTATTCAAGACCGTCTCGCCGCCCGCAAGCGCAACATGAAACGCAACAAGACCAAAGGA GGTGTCAAAATCCGAGGCCGATGGACTTCTAGTGACATTTTGAACATTCCCGAAATCAGCTTCTCCTCTTTCCAA CTATTCCCCGACCAGAATGAATACGGCCAACCCGACCCGGATTTGTCTGATTTCGAGAACACCATGCAGCGTGGT GTAGAATGGATCCAATATCACGCCGAATCTGCCCTTGCTTTCGGCAAGCCTGCTACCCTAAATGGATTTGGTCTG GTCACCCAAGAGCATGTTCCTAACTATGTCCCGTTCAACAGCTCGGAAGCTCCTTATGCTTCGGACAAGGAGCAA CCGTATGGAGTCACCAACGAACAGCGTGATGAAGCCTTCTCCACCTGGTTGAATGTTGGTTTCAGGAGCGGACTT TCCAGTATGATTCACTATCAATGGGGTCAAACCGGATTGACTGTGCAGCCTGGAACCACGGTATCACAGTCTGTC CCTGGAACTGGTCTTGTCGAGAACGATGGTATCACTGGCGTCTCTCCTAACGACGGTTACTCTTCCAATGGTGTT GGACGAGATTCTGTCATTGAGGTTCTTCAAGAGAGTGTTCAAGAATACGCATCGGATTCCACCCTTCGA |
| Length | 1497 |
Transcript
| Sequence id | CC1G_04257T0 |
|---|---|
| Sequence |
>CC1G_04257T0 ATGTTCGTCGCTGCCCTTTGGCCCGTTGCTCTCGGTGCCCTCGCAGTGCTAGCGACTGCTAAGCCGACGCGAACA TCCCCTCTTGCGAAACGCCAAGCACCATCCGACATTCGGTTCGTTACGACAGATAATGGAAGATTCGTGGTTAAT GGGGCCCCAATCAACTTTGTTGGGACCAATGCCTACTGGCTTCATACCCTGAACTCTGAGCAGGATATTGACTAC ACATTGGGCAACATCTCTGCTGCAGGTATTAAGATAGTCCGCACTTGGGCGTTTAATGAAGTCACGTCTGTCCCT GAGACCGGGACATGGTTCCAGTTAATTAAAGACGACGGGACCGTTGAGATCAACGAGGGACCCAATGGCCTCCAA AAGCTGGACGCAGTCGTGAGGCTGGCTGAAAAGCATAACATCTACTTGCTTTTGGCCCTCACGAACAATTGGAGC CCCGACCCGCTCTTCGACGACATCACGATTGGTGCAGGCCCTGTTCGCCGCTCGGATATCACCCCACCAGCGAAC GGAAGTCTACCGAGAAACTTCCTCAGCAACGACTATGGTGGAATGGATACCTATGTACGACAGTTCGGATTGGAT AATCACGACGAATTCTATACGAACCCCAAAGTTATCAACGCCTTCAAGAATTTTACTGCTACGATTGCTAAACGA TACACCAATAGCCCGGCTGTCTTCGGCTGGGAGCTGGCGAACGACGCGCGCTGCAGCTCAACCGTTGGAGCTACC ACTTGCAATCCAAAGGTTATTACCAAATGGCATTCGAATATCGCCCAACATATCAAGGAAGTAGACCCTAACCAT CTGGTTGCTTCTGGGATTATTCAAGACCGTCTCGCCGCCCGCAAGCGCAACATGAAACGCAACAAGACCAAAGGA GGTGTCAAAATCCGAGGCCGATGGACTTCTAGTGACATTTTGAACATTCCCGAAATCAGCTTCTCCTCTTTCCAA CTATTCCCCGACCAGAATGAATACGGCCAACCCGACCCGGATTTGTCTGATTTCGAGAACACCATGCAGCGTGGT GTAGAATGGATCCAATATCACGCCGAATCTGCCCTTGCTTTCGGCAAGCCTGCTACCCTAAATGGATTTGGTCTG GTCACCCAAGAGCATGTTCCTAACTATGTCCCGTTCAACAGCTCGGAAGCTCCTTATGCTTCGGACAAGGAGCAA CCGTATGGAGTCACCAACGAACAGCGTGATGAAGCCTTCTCCACCTGGTTGAATGTTGGTTTCAGGAGCGGACTT TCCAGTATGATTCACTATCAATGGGGTCAAACCGGATTGACTGTGCAGCCTGGAACCACGGTATCACAGTCTGTC CCTGGAACTGGTCTTGTCGAGAACGATGGTATCACTGGCGTCTCTCCTAACGACGGTTACTCTTCCAATGGTGTT GGACGAGATTCTGTCATTGAGGTTCTTCAAGAGAGTGTTCAAGAATACGCATCGGATTCCACCCTTCGATGA |
| Length | 1497 |
Gene
| Sequence id | CC1G_04257T0 |
|---|---|
| Sequence |
>CC1G_04257T0 ATGTTCGTCGCTGCCCTTTGGCCCGTTGCTCTCGGTGCCCTCGCAGTGCTAGCGACTGCTAAGCCGACGCGAACA TCCCCTCTTGCGAAACGCCAAGCACCATCCGACATTCGGTTCGTTACGACAGATAATGGAAGATTCGTGGTTAAT GGGGCGTAAGTCGCTGCCAACTTCTCACCGGCAGATGCTCTTCTCACGAATTGTTATAGCCCAATCAACTTTGTT GGGACCAATGCCTACTGGCTTCATACCCTGAACTCTGAGCAGGATATTGACTACACATTGGGCAACATCTCTGCT GCAGGTATTAAGATAGTCCGCACTTGGGCGTTTAATGGTCCGTTCCCCCTCCCTCCCACAGGCTTATCATAAGCT AATCCAATCTCCGCATTCATTAGAAGTCACGTCTGTCCCTGAGACCGGGACATGGTTCCAGTTAATTAAAGACGA CGGGACCGTTGAGATCAACGAGGGACCCAATGGCCTCCAAAAGCTGGACGCAGTCGTGAGGCTGGCTGAAAAGCA TAACATCTACTTGCTTTTGGCCCTCACGAACAATTGGAGCCCCGACCCGCTCTTCGACGACATCACGATTGGTGC AGGCCCTGTTCGCCGCTCGGATATCACCCCACCAGCGAACGGAAGTCTACCGAGAAACTTCCTCAGCAACGACTA TGGTGCCCCAGTTCCCAACTCAAGTGGAAACTGTATACTGACCAAATGAATGACAGGTGGAATGGATACCTATGT ACGACAGTTCGGATTGGATAATCACGACGAATTCTATACGAACCCCAAAGTTATCAACGCCTTCAAGAATTTTAC TGCTACGATTGCTAAACGATACACCAATAGCCCGGCTGTCTTCGGCTGGTGAGCCCTCCTTCCTCAATCAATCCA AACAATTTGGAACTGATCTTGGTTCAGGGAGCTGGCGAACGACGCGCGCTGCAGCTCAACCGTTGGAGCTACCAC TTGCAATCCAAAGGTTATTACCAAATGGCATTCGAATATCGCCCAACATATCAAGGAAGTAGACCCTAACCATCT GGTTGCTTCTGGGTAAGGCCCACCCCTGTTTGTGCGACTTGTTCACTCATCTGTGTTCTAGAACCGGCGGACAAT TCTGTGTTGACTGCCCAAAGCTTTTCCCTCGCGTCGTCCCTCCGCCTCCAGCCGTGTCCCCAGTACCTGGCCTAC GCCGTCGTGGGCGCACAGGTTTCCTTACCAAATCTAGGATTATTCAAGACCGTCTCGCCGCCCGCAAGCGCAACA TGAAACGCAACAAGACCAAAGGAGGTGTCAAAATCCGAGGCCGATGGACTTCTAGTGGTATGTCATCCTTTGTTG CAACAATATCCGTCCCCCCAATGTGACATCCCGTCCAGTTACGAGGCGACAGGAAGATCTTCAAACTCTTGGGCC CGCCTTTGACGGCTCCTCCGGCGTGGACAGTGAAGACATTTTGAACATTCCCGAAATCAGCTTCTCCTCTTTCCA ACTATTCCCCGACCAGAATGAATACGGCCAACCCGACCCGGATTTGTCTGATTTCGAGAACACCATGCAGCGTGG TGTAGAATGGATCCAATATCACGCCGAATCTGCCCTTGCGTAGGTTTTATCCGTTGTTTGAGCATCTAGCTTTGC TTATGCGATCTCTTTTCCAGTTTCGGCAAGCCTGCTACCCTAAATGGATTTGGTCTGGTCACCCAAGAGCATGTT CCTAACTATGTCCCGTTCAACAGCTCGGAAGCTCCTTATGCTTCGGACAGTGAGCGATTCATTGTCCCACATCAT ATCGTCACACTAACGTTTCTGACAGCCGAAACACCCACAGAGGAGCAACCGTATGGAGTCACCAACGAACAGCGT GATGAAGCCTTCTCCACCTGGTTGAATGTTGGTTTCAGGAGCGGACTTTCCAGTATGATTCACTATCAATGGGGT CAAACCGGATTGACTGTGCAGCCTGGAACCACGGTATCACAGTCTGTCCCTGGAACTGGTCTTGTCGAGAACGAT GGTATCACTGGCGTCTCTCCTAACGACGGTTACTCTTCCAATGGTGTTGGGTGAGTATCTGGTCTTCGCATGCAG CCTGCTCGACAAACTGACACGGACATCTAGACGAGATTCTGTCATTGAGGTTCTTCAAGAGAGTGTTCAAGAATA CGCATCGGATTCCACCCTTCGATGA |
| Length | 2200 |