Systematic name | CopciAB_492628 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 492628 |
Uniprot id | Functional description | Belongs to the glycosyl hydrolase 5 (cellulase A) family | |
Location | scaffold_2:1668285..1670748 | Strand | + |
Gene length (nt) | 2464 | Transcript length (nt) | 1974 |
CDS length (nt) | 1710 | Protein length (aa) | 569 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Pleurotus ostreatus PC15 | PleosPC15_2_1060958 | 55.3 | 1.618E-213 | 667 |
Pleurotus ostreatus PC9 | PleosPC9_1_75659 | 55.3 | 1.584E-213 | 667 |
Pleurotus eryngii ATCC 90797 | Pleery1_1461766 | 55.3 | 2.07E-212 | 664 |
Agrocybe aegerita | Agrae_CAA7271705 | 56.2 | 2.763E-209 | 655 |
Hypsizygus marmoreus strain 51987-8 | Hypma_RDB21378 | 53.7 | 7.778E-198 | 622 |
Lentinula edodes NBRC 111202 | Lenedo1_1072271 | 53.2 | 4.894E-192 | 605 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_190490 | 50.4 | 2.895E-185 | 585 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_111268 | 50.4 | 6.677E-185 | 584 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_8233 | 50.5 | 1.01E-182 | 578 |
Auricularia subglabra | Aurde3_1_1275343 | 41.4 | 5.279E-124 | 408 |
Lentinula edodes B17 | Lened_B_1_1_1293 | 57.5 | 1.03E-100 | 339 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_492628.T0 |
Description | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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Pfam | PF00150 | Cellulase (glycosyl hydrolase family 5) | IPR001547 | 50 | 281 |
Prediction | Start | End | Score |
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SP(Sec/SPI) | 1 | 20 | 0.9736 |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR017853 | Glycoside hydrolase superfamily |
IPR001547 | Glycoside hydrolase, family 5 |
IPR045053 | Mannan endo-1,4-beta-mannosidase-like |
Go id | Term | Ontology |
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GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
GO:0071704 | organic substance metabolic process | BP |
KEGG Orthology |
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K19355 |
COG category | Description |
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G | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
Class | Family | Subfamily |
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GH | GH5 | GH5_30 |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_492628.
Sequence id | CopciAB_492628.T0 |
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Sequence |
>CopciAB_492628.T0 MFVAALWPVALGALAVLATAKPTRTSPLAKRQAPSDIRFVTTDNGRFVVNGAPINFVGTNAYWLHTLNSEQDIDY TLGNISAAGIKIVRTWAFNEVTSVPETGTWFQLIKDDGTVEINEGPNGLQKLDAVVRLAEKHNIYLLLALTNNWS PDPLFDDITIGAGPVRRSDITPPANGSLPRNFLSNDYGGMDTYVRQFGLDNHDEFYTNPKVINAFKNFTATIAKR YTNSPAVFGWELANDARCSSTVGATTCNPKVITKWHSNIAQHIKEVDPNHLVASGTGGQFCVDCPKLFPRVVPPP PAVSPVPGLRRRGRTGFLTKSRIIQDRLAARKRNMKRNKTKGGVKIRGRWTSSVTRRQEDLQTLGPAFDGSSGVD SEDILNIPEISFSSFQLFPDQNEYGQPDPDLSDFENTMQRGVEWIQYHAESALAFGKPATLNGFGLVTQEHVPNY VPFNSSEAPYASDTETPTEEQPYGVTNEQRDEAFSTWLNVGFRSGLSSMIHYQWGQTGLTVQPGTTVSQSVPGTG LVENDGITGVSPNDGYSSNGVGRDSVIEVLQESVQEYASDSTLR |
Length | 569 |
Sequence id | CopciAB_492628.T0 |
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Sequence |
>CopciAB_492628.T0 ATGTTCGTCGCTGCCCTTTGGCCCGTTGCTCTCGGTGCCCTCGCAGTGCTAGCGACTGCTAAGCCGACGCGAACA TCCCCTCTTGCGAAACGCCAAGCACCATCCGACATTCGGTTCGTTACGACAGATAATGGAAGATTCGTGGTTAAT GGGGCCCCAATCAACTTTGTTGGGACCAATGCCTACTGGCTTCATACCCTGAACTCTGAGCAGGATATTGACTAC ACATTGGGCAACATCTCTGCTGCAGGTATTAAGATAGTCCGCACTTGGGCGTTTAATGAAGTCACGTCTGTCCCT GAGACCGGGACATGGTTCCAGTTAATTAAAGACGACGGGACCGTTGAGATCAACGAGGGACCCAATGGCCTCCAA AAGCTGGACGCAGTCGTGAGGCTGGCTGAAAAGCATAACATCTACTTGCTTTTGGCCCTCACGAACAATTGGAGC CCCGACCCGCTCTTCGACGACATCACGATTGGTGCAGGCCCTGTTCGCCGCTCGGATATCACCCCACCAGCGAAC GGAAGTCTACCGAGAAACTTCCTCAGCAACGACTATGGTGGAATGGATACCTATGTACGACAGTTCGGATTGGAT AATCACGACGAATTCTATACGAACCCCAAAGTTATCAACGCCTTCAAGAATTTTACTGCTACGATTGCTAAACGA TACACCAATAGCCCGGCTGTCTTCGGCTGGGAGCTGGCGAACGACGCGCGCTGCAGCTCAACCGTTGGAGCTACC ACTTGCAATCCAAAGGTTATTACCAAATGGCATTCGAATATCGCCCAACATATCAAGGAAGTAGACCCTAACCAT CTGGTTGCTTCTGGAACCGGCGGACAATTCTGTGTTGACTGCCCAAAGCTTTTCCCTCGCGTCGTCCCTCCGCCT CCAGCCGTGTCCCCAGTACCTGGCCTACGCCGTCGTGGGCGCACAGGTTTCCTTACCAAATCTAGGATTATTCAA GACCGTCTCGCCGCCCGCAAGCGCAACATGAAACGCAACAAGACCAAAGGAGGTGTCAAAATCCGAGGCCGATGG ACTTCTAGTGTTACGAGGCGACAGGAAGATCTTCAAACTCTTGGGCCCGCCTTTGACGGCTCCTCCGGCGTGGAC AGTGAAGACATTTTGAACATTCCCGAAATCAGCTTCTCCTCTTTCCAACTATTCCCCGACCAGAATGAATACGGC CAACCCGACCCGGATTTGTCTGATTTCGAGAACACCATGCAGCGTGGTGTAGAATGGATCCAATATCACGCCGAA TCTGCCCTTGCTTTCGGCAAGCCTGCTACCCTAAATGGATTTGGTCTGGTCACCCAAGAGCATGTTCCTAACTAT GTCCCGTTCAACAGCTCGGAAGCTCCTTATGCTTCGGACACCGAAACACCCACAGAGGAGCAACCGTATGGAGTC ACCAACGAACAGCGTGATGAAGCCTTCTCCACCTGGTTGAATGTTGGTTTCAGGAGCGGACTTTCCAGTATGATT CACTATCAATGGGGTCAAACCGGATTGACTGTGCAGCCTGGAACCACGGTATCACAGTCTGTCCCTGGAACTGGT CTTGTCGAGAACGATGGTATCACTGGCGTCTCTCCTAACGACGGTTACTCTTCCAATGGTGTTGGACGAGATTCT GTCATTGAGGTTCTTCAAGAGAGTGTTCAAGAATACGCATCGGATTCCACCCTTCGATGA |
Length | 1710 |
Sequence id | CopciAB_492628.T0 |
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Sequence |
>CopciAB_492628.T0 GAGCCCCCTTGCGCCCTTCCCGCAGGTTGCACGCCTAGGCTTCACAATGTTCGTCGCTGCCCTTTGGCCCGTTGC TCTCGGTGCCCTCGCAGTGCTAGCGACTGCTAAGCCGACGCGAACATCCCCTCTTGCGAAACGCCAAGCACCATC CGACATTCGGTTCGTTACGACAGATAATGGAAGATTCGTGGTTAATGGGGCCCCAATCAACTTTGTTGGGACCAA TGCCTACTGGCTTCATACCCTGAACTCTGAGCAGGATATTGACTACACATTGGGCAACATCTCTGCTGCAGGTAT TAAGATAGTCCGCACTTGGGCGTTTAATGAAGTCACGTCTGTCCCTGAGACCGGGACATGGTTCCAGTTAATTAA AGACGACGGGACCGTTGAGATCAACGAGGGACCCAATGGCCTCCAAAAGCTGGACGCAGTCGTGAGGCTGGCTGA AAAGCATAACATCTACTTGCTTTTGGCCCTCACGAACAATTGGAGCCCCGACCCGCTCTTCGACGACATCACGAT TGGTGCAGGCCCTGTTCGCCGCTCGGATATCACCCCACCAGCGAACGGAAGTCTACCGAGAAACTTCCTCAGCAA CGACTATGGTGGAATGGATACCTATGTACGACAGTTCGGATTGGATAATCACGACGAATTCTATACGAACCCCAA AGTTATCAACGCCTTCAAGAATTTTACTGCTACGATTGCTAAACGATACACCAATAGCCCGGCTGTCTTCGGCTG GGAGCTGGCGAACGACGCGCGCTGCAGCTCAACCGTTGGAGCTACCACTTGCAATCCAAAGGTTATTACCAAATG GCATTCGAATATCGCCCAACATATCAAGGAAGTAGACCCTAACCATCTGGTTGCTTCTGGAACCGGCGGACAATT CTGTGTTGACTGCCCAAAGCTTTTCCCTCGCGTCGTCCCTCCGCCTCCAGCCGTGTCCCCAGTACCTGGCCTACG CCGTCGTGGGCGCACAGGTTTCCTTACCAAATCTAGGATTATTCAAGACCGTCTCGCCGCCCGCAAGCGCAACAT GAAACGCAACAAGACCAAAGGAGGTGTCAAAATCCGAGGCCGATGGACTTCTAGTGTTACGAGGCGACAGGAAGA TCTTCAAACTCTTGGGCCCGCCTTTGACGGCTCCTCCGGCGTGGACAGTGAAGACATTTTGAACATTCCCGAAAT CAGCTTCTCCTCTTTCCAACTATTCCCCGACCAGAATGAATACGGCCAACCCGACCCGGATTTGTCTGATTTCGA GAACACCATGCAGCGTGGTGTAGAATGGATCCAATATCACGCCGAATCTGCCCTTGCTTTCGGCAAGCCTGCTAC CCTAAATGGATTTGGTCTGGTCACCCAAGAGCATGTTCCTAACTATGTCCCGTTCAACAGCTCGGAAGCTCCTTA TGCTTCGGACACCGAAACACCCACAGAGGAGCAACCGTATGGAGTCACCAACGAACAGCGTGATGAAGCCTTCTC CACCTGGTTGAATGTTGGTTTCAGGAGCGGACTTTCCAGTATGATTCACTATCAATGGGGTCAAACCGGATTGAC TGTGCAGCCTGGAACCACGGTATCACAGTCTGTCCCTGGAACTGGTCTTGTCGAGAACGATGGTATCACTGGCGT CTCTCCTAACGACGGTTACTCTTCCAATGGTGTTGGACGAGATTCTGTCATTGAGGTTCTTCAAGAGAGTGTTCA AGAATACGCATCGGATTCCACCCTTCGATGACGATAGCGCTGAAATTGCCTATTCTACTACGTCCCTGATCAGAT GACTCCGATGACGGTTTGCGCAACCTCGATCCTGCCCTGTCAGTTGCTTCTTGGACATTTCAATAATGCTTTGAA ATTTGGACACTTCACTTTGGTCGATCACGTTTGCTTTGCTTCTAATGTACAGTTAACCCCTAGCTTTCACGGATT TTATATACTATAATTCTACATCTC |
Length | 1974 |
Sequence id | CopciAB_492628.T0 |
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Sequence |
>CopciAB_492628.T0 GAGCCCCCTTGCGCCCTTCCCGCAGGTTGCACGCCTAGGCTTCACAATGTTCGTCGCTGCCCTTTGGCCCGTTGC TCTCGGTGCCCTCGCAGTGCTAGCGACTGCTAAGCCGACGCGAACATCCCCTCTTGCGAAACGCCAAGCACCATC CGACATTCGGTTCGTTACGACAGATAATGGAAGATTCGTGGTTAATGGGGCGTAAGTCGCTGCCAACTTCTCACC GGCAGATGCTCTTCTCACGAATTGTTATAGCCCAATCAACTTTGTTGGGACCAATGCCTACTGGCTTCATACCCT GAACTCTGAGCAGGATATTGACTACACATTGGGCAACATCTCTGCTGCAGGTATTAAGATAGTCCGCACTTGGGC GTTTAATGGTCCGTTCCCCCTCCCTCCCACAGGCTTATCATAAGCTAATCCAATCTCCGCATTCATTAGAAGTCA CGTCTGTCCCTGAGACCGGGACATGGTTCCAGTTAATTAAAGACGACGGGACCGTTGAGATCAACGAGGGACCCA ATGGCCTCCAAAAGCTGGACGCAGTCGTGAGGCTGGCTGAAAAGCATAACATCTACTTGCTTTTGGCCCTCACGA ACAATTGGAGCCCCGACCCGCTCTTCGACGACATCACGATTGGTGCAGGCCCTGTTCGCCGCTCGGATATCACCC CACCAGCGAACGGAAGTCTACCGAGAAACTTCCTCAGCAACGACTATGGTGCCCCAGTTCCCAACTCAAGTGGAA ACTGTATACTGACCAAATGAATGACAGGTGGAATGGATACCTATGTACGACAGTTCGGATTGGATAATCACGACG AATTCTATACGAACCCCAAAGTTATCAACGCCTTCAAGAATTTTACTGCTACGATTGCTAAACGATACACCAATA GCCCGGCTGTCTTCGGCTGGTGAGCCCTCCTTCCTCAATCAATCCAAACAATTTGGAACTGATCTTGGTTCAGGG AGCTGGCGAACGACGCGCGCTGCAGCTCAACCGTTGGAGCTACCACTTGCAATCCAAAGGTTATTACCAAATGGC ATTCGAATATCGCCCAACATATCAAGGAAGTAGACCCTAACCATCTGGTTGCTTCTGGGTAAGGCCCACCCCTGT TTGTGCGACTTGTTCACTCATCTGTGTTCTAGAACCGGCGGACAATTCTGTGTTGACTGCCCAAAGCTTTTCCCT CGCGTCGTCCCTCCGCCTCCAGCCGTGTCCCCAGTACCTGGCCTACGCCGTCGTGGGCGCACAGGTTTCCTTACC AAATCTAGGATTATTCAAGACCGTCTCGCCGCCCGCAAGCGCAACATGAAACGCAACAAGACCAAAGGAGGTGTC AAAATCCGAGGCCGATGGACTTCTAGTGGTATGTCATCCTTTGTTGCAACAATATCCGTCCCCCCAATGTGACAT CCCGTCCAGTTACGAGGCGACAGGAAGATCTTCAAACTCTTGGGCCCGCCTTTGACGGCTCCTCCGGCGTGGACA GTGAAGACATTTTGAACATTCCCGAAATCAGCTTCTCCTCTTTCCAACTATTCCCCGACCAGAATGAATACGGCC AACCCGACCCGGATTTGTCTGATTTCGAGAACACCATGCAGCGTGGTGTAGAATGGATCCAATATCACGCCGAAT CTGCCCTTGCGTAGGTTTTATCCGTTGTTTGAGCATCTAGCTTTGCTTATGCGATCTCTTTTCCAGTTTCGGCAA GCCTGCTACCCTAAATGGATTTGGTCTGGTCACCCAAGAGCATGTTCCTAACTATGTCCCGTTCAACAGCTCGGA AGCTCCTTATGCTTCGGACAGTGAGCGATTCATTGTCCCACATCATATCGTCACACTAACGTTTCTGACAGCCGA AACACCCACAGAGGAGCAACCGTATGGAGTCACCAACGAACAGCGTGATGAAGCCTTCTCCACCTGGTTGAATGT TGGTTTCAGGAGCGGACTTTCCAGTATGATTCACTATCAATGGGGTCAAACCGGATTGACTGTGCAGCCTGGAAC CACGGTATCACAGTCTGTCCCTGGAACTGGTCTTGTCGAGAACGATGGTATCACTGGCGTCTCTCCTAACGACGG TTACTCTTCCAATGGTGTTGGGTGAGTATCTGGTCTTCGCATGCAGCCTGCTCGACAAACTGACACGGACATCTA GACGAGATTCTGTCATTGAGGTTCTTCAAGAGAGTGTTCAAGAATACGCATCGGATTCCACCCTTCGATGACGAT AGCGCTGAAATTGCCTATTCTACTACGTCCCTGATCAGATGACTCCGATGACGGTTTGCGCAACCTCGATCCTGC CCTGTCAGTTGCTTCTTGGACATTTCAATAATGCTTTGAAATTTGGACACTTCACTTTGGTCGATCACGTTTGCT TTGCTTCTAATGTACAGTTAACCCCTAGCTTTCACGGATTTTATATACTATAATTCTACATCTC |
Length | 2464 |