CC1G_06173
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_06173 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8NV28 | Functional description | C2H2-type domain-containing protein |
| Location | Chr_4:2783603..2785022 | Strand | + |
| Gene length (nt) | 1420 | Transcript length (nt) | 1371 |
| CDS length (nt) | 1371 | Protein length (aa) | 456 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits | |
|---|---|---|---|---|---|
| No records | |||||
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 5326 |
| Description | C2H2-type domain-containing protein |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| No records | |||||
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR013087 | Zinc finger C2H2-type |
GO
| Go id | Term | Ontology |
|---|---|---|
| No records | ||
KEGG
| KEGG Orthology |
|---|
| No records |
EggNOG
| COG category | Description |
|---|---|
| No records | |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| No records | ||
Transcription factor
| Group |
|---|
| zinc finger, c2h2-type |
Conservation of CC1G_06173 across fungi.
Arrow shows the origin of gene family containing CC1G_06173.
Protein
| Sequence id | 5326 |
|---|---|
| Sequence |
>5326 MAECNQSEFVDEWDALSAALFLPPLDLYGDFVWLPSSEYGDNAATLEPFNYPPVPASSATQAAAGPAPLTGLDGV FTLNDDFPLNLGTFVPFNEQQLPSIFEPEPQDRELGLYDDPPIFTDPFKSSSKSRRVPPGSRVSTSTQREIKTIR PQQILLMEDRFHGRAEDALMARVNAQYRADVSVKPEPSSSTPARPRRDNVVSAPSTPLKRPLSVRESPAAKTPAA KTATVKTEVIESISSYSRASRYIAPLPRRASVKRTPSSTLPFLYPQPEFVNSPISSSASLSHLDSDYEFHRDDDD SDFLPSASSSPRKKQKRAGGYHLQERKGKKTQLQIVLEDLPFTLNDILYANGLYHCPFSTCGQTTTSEGDLGRHL ESSIHATHRYICLAPQCLSDFAREDSMKRHHGNNRGRNHKADHDRLVRQGFAFRVKIKDVSAVKEQIKALQVNPI QAPSAA |
| Length | 456 |
Coding
| Sequence id | CC1G_06173T0 |
|---|---|
| Sequence |
>CC1G_06173T0 ATGGCAGAATGCAATCAATCGGAATTCGTCGACGAGTGGGATGCCCTTAGCGCCGCGCTTTTCCTCCCTCCTCTC GACCTCTACGGGGATTTTGTCTGGCTCCCATCCTCCGAATATGGCGACAACGCGGCGACCCTGGAGCCATTCAAC TATCCTCCCGTCCCTGCGTCCTCCGCAACCCAGGCCGCAGCTGGCCCTGCGCCTTTGACCGGCCTTGATGGCGTC TTCACTTTGAATGACGACTTCCCTTTAAACCTCGGCACCTTCGTTCCTTTCAACGAGCAGCAACTTCCGTCAATC TTCGAGCCTGAGCCTCAAGACCGGGAACTCGGATTGTACGATGACCCTCCCATCTTCACCGACCCCTTTAAATCT TCAAGCAAGTCGCGTCGCGTGCCACCTGGTTCACGCGTGTCAACTTCGACACAAAGGGAGATCAAGACCATCAGG CCCCAACAGATCTTGCTCATGGAGGATCGGTTCCACGGGCGAGCAGAGGACGCGTTGATGGCACGGGTGAACGCT CAGTATCGTGCGGACGTCTCGGTCAAGCCTGAACCATCCTCTTCAACCCCTGCTCGTCCTCGTAGGGACAATGTC GTCTCAGCTCCCTCTACCCCTTTGAAAAGGCCCTTGTCTGTGCGCGAGTCACCTGCGGCCAAGACACCTGCGGCC AAGACGGCTACTGTCAAGACAGAAGTCATCGAGTCGATCTCATCCTATTCTCGCGCCTCACGTTATATCGCGCCT CTGCCTCGCCGAGCCAGCGTCAAGCGAACTCCTTCCTCCACACTCCCTTTCCTCTACCCACAGCCGGAATTTGTC AACAGTCCTATCTCATCATCCGCATCGTTATCTCACCTCGACTCGGATTACGAGTTCCACCGCGACGACGACGAC AGCGACTTCCTCCCTTCCGCCTCCTCCAGTCCCAGGAAGAAGCAAAAGCGCGCCGGCGGCTACCACTTGCAAGAG CGGAAGGGCAAGAAGACACAACTCCAAATCGTATTAGAAGACCTTCCTTTCACTCTAAACGACATCCTTTACGCC AATGGCCTTTACCACTGTCCTTTCAGCACCTGCGGTCAGACTACCACCAGTGAGGGTGACCTTGGTCGACACCTC GAATCCAGCATCCACGCAACCCATCGATACATTTGCCTTGCACCTCAATGCCTCAGCGACTTTGCTCGTGAAGAC TCCATGAAGCGCCATCACGGTAACAATCGGGGCAGGAACCACAAGGCTGACCACGATCGTCTCGTGCGACAAGGA TTCGCGTTTAGGGTCAAGATCAAGGATGTATCAGCCGTCAAAGAGCAAATCAAGGCTCTTCAAGTTAACCCAATC CAAGCTCCCTCTGCTGCT |
| Length | 1371 |
Transcript
| Sequence id | CC1G_06173T0 |
|---|---|
| Sequence |
>CC1G_06173T0 ATGGCAGAATGCAATCAATCGGAATTCGTCGACGAGTGGGATGCCCTTAGCGCCGCGCTTTTCCTCCCTCCTCTC GACCTCTACGGGGATTTTGTCTGGCTCCCATCCTCCGAATATGGCGACAACGCGGCGACCCTGGAGCCATTCAAC TATCCTCCCGTCCCTGCGTCCTCCGCAACCCAGGCCGCAGCTGGCCCTGCGCCTTTGACCGGCCTTGATGGCGTC TTCACTTTGAATGACGACTTCCCTTTAAACCTCGGCACCTTCGTTCCTTTCAACGAGCAGCAACTTCCGTCAATC TTCGAGCCTGAGCCTCAAGACCGGGAACTCGGATTGTACGATGACCCTCCCATCTTCACCGACCCCTTTAAATCT TCAAGCAAGTCGCGTCGCGTGCCACCTGGTTCACGCGTGTCAACTTCGACACAAAGGGAGATCAAGACCATCAGG CCCCAACAGATCTTGCTCATGGAGGATCGGTTCCACGGGCGAGCAGAGGACGCGTTGATGGCACGGGTGAACGCT CAGTATCGTGCGGACGTCTCGGTCAAGCCTGAACCATCCTCTTCAACCCCTGCTCGTCCTCGTAGGGACAATGTC GTCTCAGCTCCCTCTACCCCTTTGAAAAGGCCCTTGTCTGTGCGCGAGTCACCTGCGGCCAAGACACCTGCGGCC AAGACGGCTACTGTCAAGACAGAAGTCATCGAGTCGATCTCATCCTATTCTCGCGCCTCACGTTATATCGCGCCT CTGCCTCGCCGAGCCAGCGTCAAGCGAACTCCTTCCTCCACACTCCCTTTCCTCTACCCACAGCCGGAATTTGTC AACAGTCCTATCTCATCATCCGCATCGTTATCTCACCTCGACTCGGATTACGAGTTCCACCGCGACGACGACGAC AGCGACTTCCTCCCTTCCGCCTCCTCCAGTCCCAGGAAGAAGCAAAAGCGCGCCGGCGGCTACCACTTGCAAGAG CGGAAGGGCAAGAAGACACAACTCCAAATCGTATTAGAAGACCTTCCTTTCACTCTAAACGACATCCTTTACGCC AATGGCCTTTACCACTGTCCTTTCAGCACCTGCGGTCAGACTACCACCAGTGAGGGTGACCTTGGTCGACACCTC GAATCCAGCATCCACGCAACCCATCGATACATTTGCCTTGCACCTCAATGCCTCAGCGACTTTGCTCGTGAAGAC TCCATGAAGCGCCATCACGGTAACAATCGGGGCAGGAACCACAAGGCTGACCACGATCGTCTCGTGCGACAAGGA TTCGCGTTTAGGGTCAAGATCAAGGATGTATCAGCCGTCAAAGAGCAAATCAAGGCTCTTCAAGTTAACCCAATC CAAGCTCCCTCTGCTGCTTGA |
| Length | 1371 |
Gene
| Sequence id | CC1G_06173T0 |
|---|---|
| Sequence |
>CC1G_06173T0 ATGGCAGAATGCAATCAATCGGAATTCGTCGACGAGTGGGATGCCCTTAGCGCCGCGCTTTTCCTCCCTCCTCTC GACCTCTACGGGGATTTTGTCTGGCTCCCATCCTCCGAATATGGCGACAACGCGGCGACCCTGGAGCCATTCAAC TATCCTCCCGTCCCTGCGTCCTCCGCAACCCAGGCCGCAGCTGGCCCTGCGCCTTTGACCGGCCTTGATGGCGTC TTCACTTTGAATGACGACTTCCCTTTAAACCTCGGCACCTTCGTTCCTTTCAACGAGCAGCAACTTCCGTCAATC TTCGAGCCTGAGCCTCAAGACCGGGAACTCGGATTGTACGATGACCCTCCCATCTTCACCGACCCCTTTAAATCT TCAAGCAAGTCGCGTCGCGTGCCACCTGGTTCACGCGTGTCAACTTCGACACAAAGGGAGATCAAGACCATCAGG CCCCAACAGATCTTGCTCATGGAGGATCGGTTCCACGGGCGAGCAGAGGACGCGTTGATGGCACGGGTGAACGCT CAGTATCGTGCGGACGTCTCGGTCAAGCCTGAACCATCCTCTTCAACCCCTGCTCGTCCTCGTAGGGACAATGTC GTCTCAGCTCCCTCTACCCCTTTGAAAAGGTGTGTATCAGTCCTCACTAATAGTCACTTTTATTCACACATTTCC TAGGCCCTTGTCTGTGCGCGAGTCACCTGCGGCCAAGACACCTGCGGCCAAGACGGCTACTGTCAAGACAGAAGT CATCGAGTCGATCTCATCCTATTCTCGCGCCTCACGTTATATCGCGCCTCTGCCTCGCCGAGCCAGCGTCAAGCG AACTCCTTCCTCCACACTCCCTTTCCTCTACCCACAGCCGGAATTTGTCAACAGTCCTATCTCATCATCCGCATC GTTATCTCACCTCGACTCGGATTACGAGTTCCACCGCGACGACGACGACAGCGACTTCCTCCCTTCCGCCTCCTC CAGTCCCAGGAAGAAGCAAAAGCGCGCCGGCGGCTACCACTTGCAAGAGCGGAAGGGCAAGAAGACACAACTCCA AATCGTATTAGAAGACCTTCCTTTCACTCTAAACGACATCCTTTACGCCAATGGCCTTTACCACTGTCCTTTCAG CACCTGCGGTCAGACTACCACCAGTGAGGGTGACCTTGGTCGACACCTCGAATCCAGCATCCACGCAACCCATCG ATACATTTGCCTTGCACCTCAATGCCTCAGCGACTTTGCTCGTGAAGACTCCATGAAGCGCCATCACGGTAACAA TCGGGGCAGGAACCACAAGGCTGACCACGATCGTCTCGTGCGACAAGGATTCGCGTTTAGGGTCAAGATCAAGGA TGTATCAGCCGTCAAAGAGCAAATCAAGGCTCTTCAAGTTAACCCAATCCAAGCTCCCTCTGCTGCTTGA |
| Length | 1420 |