CC1G_06476
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_06476 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8NN89 | Functional description | Pyranose dehydrogenase |
| Location | Chr_12:1339899..1342232 | Strand | + |
| Gene length (nt) | 2334 | Transcript length (nt) | 1782 |
| CDS length (nt) | 1782 | Protein length (aa) | 593 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Hypsizygus marmoreus strain 51987-8 | Hypma_RDB26641 | 52.1 | 1.807E-189 | 599 |
| Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_121979 | 50.5 | 1.389E-177 | 564 |
| Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_190928 | 49.8 | 2.948E-177 | 563 |
| Pleurotus ostreatus PC15 | PleosPC15_2_36144 | 46.1 | 6.861E-168 | 536 |
| Lentinula edodes NBRC 111202 | Lenedo1_1159980 | 48.1 | 8.644E-167 | 533 |
| Pleurotus ostreatus PC9 | PleosPC9_1_89272 | 45.8 | 1.602E-166 | 532 |
| Lentinula edodes W1-26 v1.0 | Lentinedodes1_5022 | 47.5 | 9.992E-165 | 527 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 5576 |
| Description | Pyranose dehydrogenase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 31 | 343 |
| Pfam | PF05199 | GMC oxidoreductase | IPR007867 | 445 | 585 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| SP(Sec/SPI) | 1 | 17 | 0.9863 |
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
| IPR012132 | Glucose-methanol-choline oxidoreductase |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
| GO:0050660 | flavin adenine dinucleotide binding | MF |
KEGG
| KEGG Orthology |
|---|
| No records |
EggNOG
| COG category | Description |
|---|---|
| E | Aryl-alcohol oxidase |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| AA | AA3 | AA3_2 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_06476 across fungi.
Arrow shows the origin of gene family containing CC1G_06476.
Protein
| Sequence id | 5576 |
|---|---|
| Sequence |
>5576 MSRIALFVAALVAGCSAAVYQNINAAPRINYDFIIVGGGTAGSVLARRLSENHRHQVLLIESGPSHEGVLNIQVP SNVGLLFRTEYDWNFTTTPQTALNGRVLDYNRGHVLGGSSSINGMYWTKGSAEDYDRWASVTGDPGWSWNNLFQY TLKMESLVPPADGHDTTGQVDPSVHGTSGNVKISLPGHPLEIDPLVMAAAAELGGEFTPIVDMNSGSPLGTGWTQ STIGNGERSSAATAYLESDCLRRRNLHVVVNTRVTRVLQTRGGPGRAFRTVEIATQKNPNAPRIQLTAKKEVILS AGAIGTPHILLNSGFGNPSELAALGIRPAVNLPGVGKNLTDHPFTYVAWEVNSTSTRDVLTLDPNAAAQAFGQWF ATRTGPLTILGTNQMSWLRIPDNSSIWGQFPDPSSGSNTPHFELNFDNSAGFTGAQGGYYTSAGITISTPWSRGS VTLQSSNPFDQPNIDPGLFTSAFDEQAMLHAIRTLRRFFQANAWNGYILQPAGAWTDAIMDNDEAAIALLKATVI HAWHACGTTVMSPKRAKYGVVDPDLTVKNVQGLRIVDAGVMPFIPAAHTQFAVYVIAERAADLIKAKW |
| Length | 593 |
Coding
| Sequence id | CC1G_06476T0 |
|---|---|
| Sequence |
>CC1G_06476T0 ATGTCACGCATCGCTCTGTTCGTCGCAGCTTTGGTTGCTGGCTGTAGCGCCGCCGTTTACCAGAACATCAACGCG GCCCCTCGTATCAACTATGACTTTATCATTGTTGGAGGTGGGACTGCAGGATCAGTACTGGCAAGGCGCCTTTCA GAGAATCACCGTCACCAGGTTCTTCTGATCGAATCAGGTCCTTCACACGAAGGTGTTCTGAACATCCAAGTCCCG TCCAACGTCGGACTCCTCTTCCGCACAGAATATGACTGGAACTTCACCACCACCCCGCAGACGGCGCTCAACGGT CGTGTTCTCGACTACAATCGCGGTCATGTGCTAGGCGGGAGCTCCTCTATCAACGGAATGTACTGGACCAAAGGT TCCGCCGAAGATTACGACCGATGGGCAAGTGTTACAGGAGACCCCGGCTGGTCATGGAACAATCTGTTCCAATAC ACGCTCAAGATGGAAAGCTTGGTTCCTCCTGCTGATGGACACGACACTACGGGCCAGGTCGACCCTTCCGTCCAT GGAACTTCCGGGAACGTCAAGATCTCCCTTCCTGGACACCCACTTGAGATTGACCCTCTGGTCATGGCTGCTGCC GCGGAATTGGGTGGCGAGTTCACACCAATTGTAGACATGAACTCGGGTAGTCCCTTGGGAACGGGCTGGACTCAG TCCACGATTGGCAATGGCGAGCGAAGTAGCGCAGCCACAGCTTACTTGGAATCCGATTGTCTCAGGCGACGAAAT TTGCACGTTGTAGTGAACACACGAGTTACGCGAGTTCTTCAGACCAGGGGTGGACCGGGACGGGCCTTCAGAACT GTAGAGATCGCTACCCAGAAGAATCCGAATGCTCCGCGAATCCAGTTGACAGCAAAGAAGGAAGTCATCCTTTCC GCAGGTGCCATCGGAACGCCCCACATCCTGCTCAATTCTGGTTTCGGAAATCCCAGCGAACTCGCTGCGCTGGGA ATCAGGCCCGCCGTCAATCTTCCTGGAGTGGGAAAGAACCTCACCGACCATCCGTTTACTTACGTTGCATGGGAG GTTAATTCGACCAGTACCCGCGACGTATTGACGCTGGACCCAAATGCTGCAGCACAAGCCTTTGGCCAATGGTTC GCCACTCGAACTGGTCCTCTGACGATTCTTGGGACGAATCAGATGTCCTGGCTGAGGATCCCAGACAACTCATCG ATCTGGGGTCAGTTCCCTGACCCTTCCTCTGGAAGCAACACTCCCCACTTTGAATTGAACTTCGATAACAGCGCC GGCTTCACTGGCGCACAAGGAGGGTACTACACCAGCGCTGGAATTACTATCTCAACACCATGGTCTCGCGGCTCG GTGACACTCCAAAGTTCCAACCCCTTCGACCAGCCAAACATCGACCCCGGACTTTTCACATCTGCCTTCGACGAA CAAGCGATGCTTCACGCCATCCGGACCCTGCGGAGGTTCTTCCAGGCCAATGCCTGGAACGGATACATTCTGCAA CCAGCCGGAGCATGGACGGACGCGATCATGGATAACGACGAAGCTGCTATCGCTTTGCTGAAGGCCACTGTCATC CACGCGTGGCATGCTTGTGGGACTACGGTCATGTCTCCCAAGAGAGCTAAGTATGGAGTCGTTGACCCTGACCTA ACGGTCAAGAACGTCCAGGGGTTGAGAATCGTTGATGCGGGTGTCATGCCTTTCATCCCAGCAGCTCACACCCAA TTCGCTGTCTATGTCATCGCTGAAAGGGCGGCCGATCTAATTAAAGCAAAGTGG |
| Length | 1782 |
Transcript
| Sequence id | CC1G_06476T0 |
|---|---|
| Sequence |
>CC1G_06476T0 ATGTCACGCATCGCTCTGTTCGTCGCAGCTTTGGTTGCTGGCTGTAGCGCCGCCGTTTACCAGAACATCAACGCG GCCCCTCGTATCAACTATGACTTTATCATTGTTGGAGGTGGGACTGCAGGATCAGTACTGGCAAGGCGCCTTTCA GAGAATCACCGTCACCAGGTTCTTCTGATCGAATCAGGTCCTTCACACGAAGGTGTTCTGAACATCCAAGTCCCG TCCAACGTCGGACTCCTCTTCCGCACAGAATATGACTGGAACTTCACCACCACCCCGCAGACGGCGCTCAACGGT CGTGTTCTCGACTACAATCGCGGTCATGTGCTAGGCGGGAGCTCCTCTATCAACGGAATGTACTGGACCAAAGGT TCCGCCGAAGATTACGACCGATGGGCAAGTGTTACAGGAGACCCCGGCTGGTCATGGAACAATCTGTTCCAATAC ACGCTCAAGATGGAAAGCTTGGTTCCTCCTGCTGATGGACACGACACTACGGGCCAGGTCGACCCTTCCGTCCAT GGAACTTCCGGGAACGTCAAGATCTCCCTTCCTGGACACCCACTTGAGATTGACCCTCTGGTCATGGCTGCTGCC GCGGAATTGGGTGGCGAGTTCACACCAATTGTAGACATGAACTCGGGTAGTCCCTTGGGAACGGGCTGGACTCAG TCCACGATTGGCAATGGCGAGCGAAGTAGCGCAGCCACAGCTTACTTGGAATCCGATTGTCTCAGGCGACGAAAT TTGCACGTTGTAGTGAACACACGAGTTACGCGAGTTCTTCAGACCAGGGGTGGACCGGGACGGGCCTTCAGAACT GTAGAGATCGCTACCCAGAAGAATCCGAATGCTCCGCGAATCCAGTTGACAGCAAAGAAGGAAGTCATCCTTTCC GCAGGTGCCATCGGAACGCCCCACATCCTGCTCAATTCTGGTTTCGGAAATCCCAGCGAACTCGCTGCGCTGGGA ATCAGGCCCGCCGTCAATCTTCCTGGAGTGGGAAAGAACCTCACCGACCATCCGTTTACTTACGTTGCATGGGAG GTTAATTCGACCAGTACCCGCGACGTATTGACGCTGGACCCAAATGCTGCAGCACAAGCCTTTGGCCAATGGTTC GCCACTCGAACTGGTCCTCTGACGATTCTTGGGACGAATCAGATGTCCTGGCTGAGGATCCCAGACAACTCATCG ATCTGGGGTCAGTTCCCTGACCCTTCCTCTGGAAGCAACACTCCCCACTTTGAATTGAACTTCGATAACAGCGCC GGCTTCACTGGCGCACAAGGAGGGTACTACACCAGCGCTGGAATTACTATCTCAACACCATGGTCTCGCGGCTCG GTGACACTCCAAAGTTCCAACCCCTTCGACCAGCCAAACATCGACCCCGGACTTTTCACATCTGCCTTCGACGAA CAAGCGATGCTTCACGCCATCCGGACCCTGCGGAGGTTCTTCCAGGCCAATGCCTGGAACGGATACATTCTGCAA CCAGCCGGAGCATGGACGGACGCGATCATGGATAACGACGAAGCTGCTATCGCTTTGCTGAAGGCCACTGTCATC CACGCGTGGCATGCTTGTGGGACTACGGTCATGTCTCCCAAGAGAGCTAAGTATGGAGTCGTTGACCCTGACCTA ACGGTCAAGAACGTCCAGGGGTTGAGAATCGTTGATGCGGGTGTCATGCCTTTCATCCCAGCAGCTCACACCCAA TTCGCTGTCTATGTCATCGCTGAAAGGGCGGCCGATCTAATTAAAGCAAAGTGGTGA |
| Length | 1782 |
Gene
| Sequence id | CC1G_06476T0 |
|---|---|
| Sequence |
>CC1G_06476T0 ATGTCACGCATCGCTCTGTTCGTCGCAGCTTTGGTTGCTGGCTGTAGCGCCGCCGTTTACCAGAACATCAACGCG GCCCCTCGTATCAACTATGACTTTATCATTGTTGGAGGTGTGTACCTACTGGCGGCTGAACCCTTTCTGCATCAC GCTAATGGACTGTGTATAGGTGGGACTGCAGGATCAGTACTGGCAAGGCGCCTTTCAGAGAATCACCGTCACCAG GTTCTTCTGATCGAATCAGGTCCTTCGTACGTCGCTCCACTTATGTGATATGTCGAGCTCAGCGACCAACCTTCC ATACAGACACGAAGGTGTTCTGAACATCCAAGTCCCGTCCAACGTCGGACTCCTCTTCCGCACAGAATATGACTG GAACTTCACCACCACCCCGCAGACGGCGCTCAACGGTCGTGTTCTCGACTACAATCGCGGTCATGTGCTAGGCGG GAGCTCCTCTATCAGTGCGTTTCATACTTCTCAATGCTGTGTGGCCAGTGGTCTGACATGGGGAATGTAGACGGA ATGTACTGGACCAAAGGTTCCGCCGAAGATTACGACCGATGGGCAAGTGTTACAGGAGACCCCGGCTGGTCATGG AACAATCTGTTCCAATACACGCTCAAGGTGTGTTGGTCGATCTTTGCCCAGCGGCGCCCCATGTCTCACGCTTCT CGACAGATGGAAAGCTTGGTTCCTCCTGCTGATGGACACGACACTACGGGCCAGGTCGACCCTTCCGTCCATGGA ACTTCCGGGAACGTCAAGATCTCCCTTCCTGGACACCCACTTGAGATTGACCCTCTGGTCATGGCTGCTGCCGCG GAATTGGGTGGCGAGTTCACACCAATTGTAGACATGAACTCGGGTAGTCCCTTGGGAACGGGTGAGTTCAGCTAC TTCGACATGCCCATCGATTTCGCTAAACCCATGCCAGGCTGGACTCAGTCCACGATTGGCAATGGCGAGCGAAGT AGCGCAGCCACAGCTTACTTGGAATCCGATTGTCTCAGGCGACGAAATTTGCACGTTGTAGTGAACACACGAGTT ACGCGAGTTCTTCAGACCAGGGGTGGACCGGGACGGGCCTTCAGAACTGTAGAGATCGCTACCCAGAAGAATCCG AATGGTACAGTACAATACCCTCCATGTCTGATTTTGCTCACCCCACAACCCGACTCCAGCTCCGCGAATCCAGTT GACAGCAAAGAAGGAAGTCATCCTTTCCGCAGGTGCCATCGGAACGCCCCACATCCTGCTCAATTCTGGTTTCGG AAATCCCAGCGAACTCGCTGCGCTGGGAATCAGGCCCGCCGTCAATCTTCCTGGAGTGGGAAAGAACCTCACCGA CCATCCGTTTACTTACGTTGCATGGGAGGTTAATTCGACCAGTACCCGCGACGTGTGCGTCTCACTTTCAATACA ACTCTGCTAACTATTAACCACAGACCAATAATCCTGCAGATTGACGCTGGACCCAAATGCTGCAGCACAAGCCTT TGGCCAATGGTTCGCCACTCGAACTGGTCCTCTGACGATTCTTGGGACGAATCAGATGTCCTGGCTGAGGATCCC AGACAACTCATCGATCTGGGGTCAGTTCCCTGACCCTTCCTCTGGAAGCAACACTCCCCACTTTGAATTGAACTT CGATGTAAGCAAGTCATCCCCTAACCAGAGCTCCAGGTACTGACTGGACCCTTTAGAACAGCGCCGGCTTCACTG GCGCACAAGGAGGGTACTACACCAGCGCTGGAATTACTATCTCAACACCATGGTCTCGTATGTTGCTCCCAGAGT CCCCAACCGCGTGCAGACTTGCTTAATCTTCTCTTCCAGGCGGCTCGGTGACACTCCAAAGTTCCAACCCCTTCG ACCAGCCAAACATCGACCCCGGACTTTTCACATCTGCCTTCGACGAACAAGCGATGCTTCACGCCATCCGGACCC TGCGGAGGTTCTTCCAGGCCAATGCCTGGAACGGATACATTCTGCAACCAGCCGGAGCATGGACGGACGCGATCA TGGATAACGACGAAGCTGCTATCGCTTTGCTGAAGGCCACTGTCATCCACGCGTGGCATGCTTGTGGGACTACGG TCATGTCTCCCAAGAGAGCTAAGTATGGAGTCGTTGACCCTGACCTAACGGTCAAGAACGTCCAGGGGTTGAGAA TCGTTGATGCGGGTGTCATGGTATGGTCCATACTGGGTGTTTTGATTATGTTGTTCTGACCGCTTCGTCTCCCAG CCTTTCATCCCAGCAGCTCACACCCAATTCGCTGTCTATGTCATCGCTGAAAGGGCGGCCGATCTAATTAAAGCA AAGTGGTGA |
| Length | 2334 |