Systematic name | CopciAB_354703 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 354703 |
Uniprot id | Functional description | Aryl-alcohol oxidase | |
Location | scaffold_11:1413476..1415972 | Strand | + |
Gene length (nt) | 2497 | Transcript length (nt) | 1945 |
CDS length (nt) | 1782 | Protein length (aa) | 593 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Hypsizygus marmoreus strain 51987-8 | Hypma_RDB26641 | 52.1 | 1.807E-189 | 599 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_121979 | 50.5 | 1.389E-177 | 564 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_190928 | 49.8 | 2.948E-177 | 563 |
Pleurotus ostreatus PC15 | PleosPC15_2_36144 | 46.1 | 6.861E-168 | 536 |
Lentinula edodes NBRC 111202 | Lenedo1_1159980 | 48.1 | 8.644E-167 | 533 |
Pleurotus ostreatus PC9 | PleosPC9_1_89272 | 45.8 | 1.602E-166 | 532 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_5022 | 47.5 | 9.992E-165 | 527 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_354703.T0 |
Description | Aryl-alcohol oxidase |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 31 | 343 |
Pfam | PF05199 | GMC oxidoreductase | IPR007867 | 445 | 585 |
Prediction | Start | End | Score |
---|---|---|---|
SP(Sec/SPI) | 1 | 17 | 0.9863 |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
IPR012132 | Glucose-methanol-choline oxidoreductase |
IPR036188 | FAD/NAD(P)-binding domain superfamily |
IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal |
Go id | Term | Ontology |
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GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
GO:0050660 | flavin adenine dinucleotide binding | MF |
KEGG Orthology |
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No records |
COG category | Description |
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E | Aryl-alcohol oxidase |
Class | Family | Subfamily |
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AA | AA3 | AA3_2 |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_354703.
Sequence id | CopciAB_354703.T0 |
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Sequence |
>CopciAB_354703.T0 MSRIALFVAALVAGCSAAVYQNINAAPRINYDFIIVGGGTAGSVLARRLSENHRHQVLLIESGPSHEGVLNIQVP SNVGLLFRTEYDWNFTTTPQTALNGRVLDYNRGHVLGGSSSINGMYWTKGSAEDYDRWASVTGDPGWSWNNLFQY TLKMESLVPPADGHDTTGQVDPSVHGTSGNVKISLPGHPLEIDPLVMAAAAELGGEFTPIVDMNSGSPLGTGWTQ STIGNGERSSAATAYLESDCLRRRNLHVVVNTRVTRVLQTRGGPGRAFRTVEIATQKNPNAPRIQLTAKKEVILS AGAIGTPHILLNSGFGNPSELAALGIRPAVNLPGVGKNLTDHPFTYVAWEVNSTSTRDVLTLDPNAAAQAFGQWF ATRTGPLTILGTNQMSWLRIPDNSSIWGQFPDPSSGSNTPHFELNFDNSAGFTGAQGGYYTSAGITISTPWSRGS VTLQSSNPFDQPNIDPGLFTSAFDEQAMLHAIRTLRRFFQANAWNGYILQPAGAWTDAIMDNDEAAIALLKATVI HAWHACGTTVMSPKRAKYGVVDPDLTVKNVQGLRIVDAGVMPFIPAAHTQFAVYVIAERAADLIKAKW |
Length | 593 |
Sequence id | CopciAB_354703.T0 |
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Sequence |
>CopciAB_354703.T0 ATGTCACGCATCGCTCTGTTCGTCGCAGCTTTGGTTGCTGGCTGTAGCGCCGCCGTTTACCAGAACATCAACGCG GCCCCTCGTATCAACTATGACTTTATCATTGTTGGAGGTGGGACTGCAGGATCAGTACTGGCAAGGCGCCTTTCA GAGAATCACCGTCACCAGGTTCTTCTGATCGAATCAGGTCCTTCACACGAAGGTGTTCTGAACATCCAAGTCCCG TCCAACGTCGGACTCCTCTTCCGCACAGAATATGACTGGAACTTCACCACCACCCCGCAGACGGCGCTCAACGGT CGTGTTCTCGACTACAATCGCGGTCATGTGCTAGGCGGGAGCTCCTCTATCAACGGAATGTACTGGACCAAAGGT TCCGCCGAAGATTACGACCGATGGGCAAGTGTTACAGGAGACCCCGGCTGGTCATGGAACAATCTGTTCCAATAC ACGCTCAAGATGGAAAGCTTGGTTCCTCCTGCTGATGGACACGACACTACGGGCCAGGTCGACCCTTCCGTCCAT GGAACTTCCGGGAACGTCAAGATCTCCCTTCCTGGACACCCACTTGAGATTGACCCTCTGGTCATGGCTGCTGCC GCGGAATTGGGTGGCGAGTTCACACCAATTGTAGACATGAACTCGGGTAGTCCCTTGGGAACGGGCTGGACTCAG TCCACGATTGGCAATGGCGAGCGAAGTAGCGCAGCCACAGCTTACTTGGAATCCGATTGTCTCAGGCGACGAAAT TTGCACGTTGTAGTGAACACACGAGTTACGCGAGTTCTTCAGACCAGGGGTGGACCGGGACGGGCCTTCAGAACT GTAGAGATCGCTACCCAGAAGAATCCGAATGCTCCGCGAATCCAGTTGACAGCAAAGAAGGAAGTCATCCTTTCC GCAGGTGCCATCGGAACGCCCCACATCCTGCTCAATTCTGGTTTCGGAAATCCCAGCGAACTCGCTGCGCTGGGA ATCAGGCCCGCCGTCAATCTTCCTGGAGTGGGAAAGAACCTCACCGACCATCCGTTTACTTACGTTGCATGGGAG GTTAATTCGACCAGTACCCGCGACGTATTGACGCTGGACCCAAATGCTGCAGCACAAGCCTTTGGCCAATGGTTC GCCACTCGAACTGGTCCTCTGACGATTCTTGGGACGAATCAGATGTCCTGGCTGAGGATCCCAGACAACTCATCG ATCTGGGGTCAGTTCCCTGACCCTTCCTCTGGAAGCAACACTCCCCACTTTGAATTGAACTTCGATAACAGCGCC GGCTTCACTGGCGCACAAGGAGGGTACTACACCAGCGCTGGAATTACTATCTCAACACCATGGTCTCGCGGCTCG GTGACACTCCAAAGTTCCAACCCCTTCGACCAGCCAAACATCGACCCCGGACTTTTCACATCTGCCTTCGACGAA CAAGCGATGCTTCACGCCATCCGGACCCTGCGGAGGTTCTTCCAGGCCAATGCCTGGAACGGATACATTCTGCAA CCAGCCGGAGCATGGACGGACGCGATCATGGATAACGACGAAGCTGCTATCGCTTTGCTGAAGGCCACTGTCATC CACGCGTGGCATGCTTGTGGGACTACGGTCATGTCTCCCAAGAGAGCTAAGTATGGAGTCGTTGACCCTGACCTA ACGGTCAAGAACGTCCAGGGGTTGAGAATCGTTGATGCGGGTGTCATGCCTTTCATCCCAGCAGCTCACACCCAA TTCGCTGTCTATGTCATCGCTGAAAGGGCGGCCGATCTAATTAAAGCAAAGTGGTGA |
Length | 1782 |
Sequence id | CopciAB_354703.T0 |
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Sequence |
>CopciAB_354703.T0 GAACAAGTCGCTCGTCATGTCACGCATCGCTCTGTTCGTCGCAGCTTTGGTTGCTGGCTGTAGCGCCGCCGTTTA CCAGAACATCAACGCGGCCCCTCGTATCAACTATGACTTTATCATTGTTGGAGGTGGGACTGCAGGATCAGTACT GGCAAGGCGCCTTTCAGAGAATCACCGTCACCAGGTTCTTCTGATCGAATCAGGTCCTTCACACGAAGGTGTTCT GAACATCCAAGTCCCGTCCAACGTCGGACTCCTCTTCCGCACAGAATATGACTGGAACTTCACCACCACCCCGCA GACGGCGCTCAACGGTCGTGTTCTCGACTACAATCGCGGTCATGTGCTAGGCGGGAGCTCCTCTATCAACGGAAT GTACTGGACCAAAGGTTCCGCCGAAGATTACGACCGATGGGCAAGTGTTACAGGAGACCCCGGCTGGTCATGGAA CAATCTGTTCCAATACACGCTCAAGATGGAAAGCTTGGTTCCTCCTGCTGATGGACACGACACTACGGGCCAGGT CGACCCTTCCGTCCATGGAACTTCCGGGAACGTCAAGATCTCCCTTCCTGGACACCCACTTGAGATTGACCCTCT GGTCATGGCTGCTGCCGCGGAATTGGGTGGCGAGTTCACACCAATTGTAGACATGAACTCGGGTAGTCCCTTGGG AACGGGCTGGACTCAGTCCACGATTGGCAATGGCGAGCGAAGTAGCGCAGCCACAGCTTACTTGGAATCCGATTG TCTCAGGCGACGAAATTTGCACGTTGTAGTGAACACACGAGTTACGCGAGTTCTTCAGACCAGGGGTGGACCGGG ACGGGCCTTCAGAACTGTAGAGATCGCTACCCAGAAGAATCCGAATGCTCCGCGAATCCAGTTGACAGCAAAGAA GGAAGTCATCCTTTCCGCAGGTGCCATCGGAACGCCCCACATCCTGCTCAATTCTGGTTTCGGAAATCCCAGCGA ACTCGCTGCGCTGGGAATCAGGCCCGCCGTCAATCTTCCTGGAGTGGGAAAGAACCTCACCGACCATCCGTTTAC TTACGTTGCATGGGAGGTTAATTCGACCAGTACCCGCGACGTATTGACGCTGGACCCAAATGCTGCAGCACAAGC CTTTGGCCAATGGTTCGCCACTCGAACTGGTCCTCTGACGATTCTTGGGACGAATCAGATGTCCTGGCTGAGGAT CCCAGACAACTCATCGATCTGGGGTCAGTTCCCTGACCCTTCCTCTGGAAGCAACACTCCCCACTTTGAATTGAA CTTCGATAACAGCGCCGGCTTCACTGGCGCACAAGGAGGGTACTACACCAGCGCTGGAATTACTATCTCAACACC ATGGTCTCGCGGCTCGGTGACACTCCAAAGTTCCAACCCCTTCGACCAGCCAAACATCGACCCCGGACTTTTCAC ATCTGCCTTCGACGAACAAGCGATGCTTCACGCCATCCGGACCCTGCGGAGGTTCTTCCAGGCCAATGCCTGGAA CGGATACATTCTGCAACCAGCCGGAGCATGGACGGACGCGATCATGGATAACGACGAAGCTGCTATCGCTTTGCT GAAGGCCACTGTCATCCACGCGTGGCATGCTTGTGGGACTACGGTCATGTCTCCCAAGAGAGCTAAGTATGGAGT CGTTGACCCTGACCTAACGGTCAAGAACGTCCAGGGGTTGAGAATCGTTGATGCGGGTGTCATGCCTTTCATCCC AGCAGCTCACACCCAATTCGCTGTCTATGTCATCGCTGAAAGGGCGGCCGATCTAATTAAAGCAAAGTGGTGAAT GGATGTAACAAATGACAAGGGCTTCGACTGTCGTTTTGTAATGTACGATTCTTGTAATCTTTCTGTTCTCTTCAT GGCTCCCCAGTCGTATGGTCTTACCTTTCATCCGAGTATTCAAGGAATAATAACGTATTTCGTCCCAAAA |
Length | 1945 |
Sequence id | CopciAB_354703.T0 |
---|---|
Sequence |
>CopciAB_354703.T0 GAACAAGTCGCTCGTCATGTCACGCATCGCTCTGTTCGTCGCAGCTTTGGTTGCTGGCTGTAGCGCCGCCGTTTA CCAGAACATCAACGCGGCCCCTCGTATCAACTATGACTTTATCATTGTTGGAGGTGTGTACCTACTGGCGGCTGA ACCCTTTCTGCATCACGCTAATGGACTGTGTATAGGTGGGACTGCAGGATCAGTACTGGCAAGGCGCCTTTCAGA GAATCACCGTCACCAGGTTCTTCTGATCGAATCAGGTCCTTCGTACGTCGCTCCACTTATGTGATATGTCGAGCT CAGCGACCAACCTTCCATACAGACACGAAGGTGTTCTGAACATCCAAGTCCCGTCCAACGTCGGACTCCTCTTCC GCACAGAATATGACTGGAACTTCACCACCACCCCGCAGACGGCGCTCAACGGTCGTGTTCTCGACTACAATCGCG GTCATGTGCTAGGCGGGAGCTCCTCTATCAGTGCGTTTCATACTTCTCAATGCTGTGTGGCCAGTGGTCTGACAT GGGGAATGTAGACGGAATGTACTGGACCAAAGGTTCCGCCGAAGATTACGACCGATGGGCAAGTGTTACAGGAGA CCCCGGCTGGTCATGGAACAATCTGTTCCAATACACGCTCAAGGTGTGTTGGTCGATCTTTGCCCAGCGGCGCCC CATGTCTCACGCTTCTCGACAGATGGAAAGCTTGGTTCCTCCTGCTGATGGACACGACACTACGGGCCAGGTCGA CCCTTCCGTCCATGGAACTTCCGGGAACGTCAAGATCTCCCTTCCTGGACACCCACTTGAGATTGACCCTCTGGT CATGGCTGCTGCCGCGGAATTGGGTGGCGAGTTCACACCAATTGTAGACATGAACTCGGGTAGTCCCTTGGGAAC GGGTGAGTTCAGCTACTTCGACATGCCCATCGATTTCGCTAAACCCATGCCAGGCTGGACTCAGTCCACGATTGG CAATGGCGAGCGAAGTAGCGCAGCCACAGCTTACTTGGAATCCGATTGTCTCAGGCGACGAAATTTGCACGTTGT AGTGAACACACGAGTTACGCGAGTTCTTCAGACCAGGGGTGGACCGGGACGGGCCTTCAGAACTGTAGAGATCGC TACCCAGAAGAATCCGAATGGTACAGTACAATACCCTCCATGTCTGATTTTGCTCACCCCACAACCCGACTCCAG CTCCGCGAATCCAGTTGACAGCAAAGAAGGAAGTCATCCTTTCCGCAGGTGCCATCGGAACGCCCCACATCCTGC TCAATTCTGGTTTCGGAAATCCCAGCGAACTCGCTGCGCTGGGAATCAGGCCCGCCGTCAATCTTCCTGGAGTGG GAAAGAACCTCACCGACCATCCGTTTACTTACGTTGCATGGGAGGTTAATTCGACCAGTACCCGCGACGTGTGCG TCTCACTTTCAATACAACTCTGCTAACTATTAACCACAGACCAATAATCCTGCAGATTGACGCTGGACCCAAATG CTGCAGCACAAGCCTTTGGCCAATGGTTCGCCACTCGAACTGGTCCTCTGACGATTCTTGGGACGAATCAGATGT CCTGGCTGAGGATCCCAGACAACTCATCGATCTGGGGTCAGTTCCCTGACCCTTCCTCTGGAAGCAACACTCCCC ACTTTGAATTGAACTTCGATGTAAGCAAGTCATCCCCTAACCAGAGCTCCAGGTACTGACTGGACCCTTTAGAAC AGCGCCGGCTTCACTGGCGCACAAGGAGGGTACTACACCAGCGCTGGAATTACTATCTCAACACCATGGTCTCGT ATGTTGCTCCCAGAGTCCCCAACCGCGTGCAGACTTGCTTAATCTTCTCTTCCAGGCGGCTCGGTGACACTCCAA AGTTCCAACCCCTTCGACCAGCCAAACATCGACCCCGGACTTTTCACATCTGCCTTCGACGAACAAGCGATGCTT CACGCCATCCGGACCCTGCGGAGGTTCTTCCAGGCCAATGCCTGGAACGGATACATTCTGCAACCAGCCGGAGCA TGGACGGACGCGATCATGGATAACGACGAAGCTGCTATCGCTTTGCTGAAGGCCACTGTCATCCACGCGTGGCAT GCTTGTGGGACTACGGTCATGTCTCCCAAGAGAGCTAAGTATGGAGTCGTTGACCCTGACCTAACGGTCAAGAAC GTCCAGGGGTTGAGAATCGTTGATGCGGGTGTCATGGTATGGTCCATACTGGGTGTTTTGATTATGTTGTTCTGA CCGCTTCGTCTCCCAGCCTTTCATCCCAGCAGCTCACACCCAATTCGCTGTCTATGTCATCGCTGAAAGGGCGGC CGATCTAATTAAAGCAAAGTGGTGAATGGATGTAACAAATGACAAGGGCTTCGACTGTCGTTTTGTAATGTACGA TTCTTGTAATCTTTCTGTTCTCTTCATGGCTCCCCAGTCGTATGGTCTTACCTTTCATCCGAGTATTCAAGGAAT AATAACGTATTTCGTCCCAAAA |
Length | 2497 |