CC1G_06563
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_06563 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8N2Z1 | Functional description | Exo-beta-1,3-glucanase |
| Location | Chr_1:2836994..2838624 | Strand | - |
| Gene length (nt) | 1631 | Transcript length (nt) | 1269 |
| CDS length (nt) | 1269 | Protein length (aa) | 422 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| Candida albicans | XOG1 |
| Aspergillus niger | exgA |
| Aspergillus nidulans | AN4052_exgC |
| Saccharomyces cerevisiae | YLR300W_EXG1 |
| Schizosaccharomyces pombe | exg1 |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Hypsizygus marmoreus strain 51987-8 | Hypma_RDB29660 | 69.7 | 2.797E-210 | 650 |
| Agrocybe aegerita | Agrae_CAA7264788 | 68.9 | 1.224E-209 | 648 |
| Pleurotus ostreatus PC15 | PleosPC15_2_1088664 | 67.3 | 3.488E-204 | 632 |
| Pleurotus ostreatus PC9 | PleosPC9_1_115916 | 67.3 | 3.414E-204 | 632 |
| Pleurotus eryngii ATCC 90797 | Pleery1_1500459 | 68.7 | 1.089E-201 | 625 |
| Schizophyllum commune H4-8 | Schco3_73246 | 62.7 | 4.258E-187 | 583 |
| Auricularia subglabra | Aurde3_1_1235571 | 58.5 | 4.617E-172 | 540 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 5647 |
| Description | Exo-beta-1,3-glucanase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00150 | Cellulase (glycosyl hydrolase family 5) | IPR001547 | 82 | 317 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| SP(Sec/SPI) | 1 | 25 | 0.9685 |
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
InterPro
| Accession | Description |
|---|---|
| IPR001547 | Glycoside hydrolase, family 5 |
| IPR017853 | Glycoside hydrolase superfamily |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
| GO:0071704 | organic substance metabolic process | BP |
KEGG
| KEGG Orthology |
|---|
| K01210 |
EggNOG
| COG category | Description |
|---|---|
| G | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| GH | GH5 | GH5_9 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_06563 across fungi.
Arrow shows the origin of gene family containing CC1G_06563.
Protein
| Sequence id | 5647 |
|---|---|
| Sequence |
>5647 MRRTLVTLLAAVLSLVSLAPMASFAYTWGFPYESQKIRGVNLGGWLVTEPWITPSLFDNTGDPRIIDEWTFGLYQ DKDKAYTALKQHWETWITEKDFEDIAAAGLNHVRLPIGYWAFEVAPDEPYIQGQLEYLDRAITWAQKYNLKVIID LHGAPGSQNGFDNSGQKMDYPTWHTKQSNVDRTNAVIQRIADLYKDRTGVVPAIAPLNEPAGFFGADVLSVTRQY WLDSYGNIRYPYGNDATSNTVVIIHDAFEPTANWKDFMPYPQYEGVILDTHIYQVFNNDQVAWSEDQHIRGICDR ASAMTDSGMWTVVGEWSPARTDCTKYLNGRGIGNRYEGTYPGSTRVGSCEGLTGDASSFSASYKTFLRKFWEAQT ITYEKGQGWIQWTWKAEQADDWSYQAGLENGWIPKNPTDRQYPNICD |
| Length | 422 |
Coding
| Sequence id | CC1G_06563T0 |
|---|---|
| Sequence |
>CC1G_06563T0 ATGCGTCGAACATTAGTCACTCTTTTAGCCGCCGTTCTTTCTCTCGTTTCCCTGGCCCCCATGGCGTCGTTCGCC TACACCTGGGGGTTCCCGTATGAATCTCAGAAGATCCGGGGCGTCAACCTGGGTGGCTGGCTTGTCACTGAGCCC TGGATCACGCCTTCGCTTTTCGACAATACCGGTGACCCACGTATTATCGACGAATGGACTTTCGGTCTTTACCAG GATAAGGACAAGGCGTACACCGCGCTCAAGCAGCACTGGGAAACTTGGATCACTGAGAAAGATTTCGAAGATATC GCTGCCGCTGGGCTGAATCACGTCCGCCTCCCCATCGGCTACTGGGCGTTCGAGGTCGCGCCGGATGAGCCGTAC ATCCAAGGTCAACTTGAATACCTCGACCGAGCGATTACTTGGGCCCAGAAATATAACTTGAAGGTCATCATTGAC CTGCATGGCGCGCCTGGCAGTCAGAATGGCTTCGACAACTCTGGCCAGAAGATGGACTACCCTACCTGGCATACA AAGCAGAGCAACGTCGACAGGACCAATGCTGTCATCCAACGAATTGCAGACTTGTACAAAGATAGAACTGGAGTT GTCCCAGCTATCGCACCTCTCAACGAGCCTGCTGGTTTCTTCGGAGCAGACGTTCTGAGTGTTACCCGCCAATAC TGGCTCGACAGCTACGGTAACATTCGTTACCCTTACGGCAACGACGCGACGAGCAACACCGTCGTCATCATCCAC GACGCTTTTGAGCCCACTGCAAACTGGAAGGACTTCATGCCCTATCCTCAGTACGAAGGTGTCATCCTTGATACC CATATCTACCAGGTCTTCAACAACGATCAAGTTGCTTGGTCGGAAGATCAGCACATCCGCGGTATCTGCGACCGT GCCAGCGCCATGACGGATTCCGGGATGTGGACTGTCGTCGGCGAATGGTCTCCAGCAAGGACCGATTGCACCAAA TATCTGAATGGAAGAGGCATTGGCAACCGCTATGAGGGTACCTACCCTGGATCGACCCGCGTCGGCAGCTGCGAA GGGCTTACCGGAGATGCTTCCTCCTTCAGCGCAAGTTACAAGACGTTCTTGAGGAAGTTCTGGGAGGCACAGACT ATCACGTACGAGAAGGGTCAGGGTTGGATCCAATGGACGTGGAAGGCCGAGCAGGCAGACGACTGGTCTTACCAG GCCGGTCTAGAGAATGGATGGATTCCTAAGAATCCTACTGACCGACAATACCCTAATATCTGCGAT |
| Length | 1269 |
Transcript
| Sequence id | CC1G_06563T0 |
|---|---|
| Sequence |
>CC1G_06563T0 ATGCGTCGAACATTAGTCACTCTTTTAGCCGCCGTTCTTTCTCTCGTTTCCCTGGCCCCCATGGCGTCGTTCGCC TACACCTGGGGGTTCCCGTATGAATCTCAGAAGATCCGGGGCGTCAACCTGGGTGGCTGGCTTGTCACTGAGCCC TGGATCACGCCTTCGCTTTTCGACAATACCGGTGACCCACGTATTATCGACGAATGGACTTTCGGTCTTTACCAG GATAAGGACAAGGCGTACACCGCGCTCAAGCAGCACTGGGAAACTTGGATCACTGAGAAAGATTTCGAAGATATC GCTGCCGCTGGGCTGAATCACGTCCGCCTCCCCATCGGCTACTGGGCGTTCGAGGTCGCGCCGGATGAGCCGTAC ATCCAAGGTCAACTTGAATACCTCGACCGAGCGATTACTTGGGCCCAGAAATATAACTTGAAGGTCATCATTGAC CTGCATGGCGCGCCTGGCAGTCAGAATGGCTTCGACAACTCTGGCCAGAAGATGGACTACCCTACCTGGCATACA AAGCAGAGCAACGTCGACAGGACCAATGCTGTCATCCAACGAATTGCAGACTTGTACAAAGATAGAACTGGAGTT GTCCCAGCTATCGCACCTCTCAACGAGCCTGCTGGTTTCTTCGGAGCAGACGTTCTGAGTGTTACCCGCCAATAC TGGCTCGACAGCTACGGTAACATTCGTTACCCTTACGGCAACGACGCGACGAGCAACACCGTCGTCATCATCCAC GACGCTTTTGAGCCCACTGCAAACTGGAAGGACTTCATGCCCTATCCTCAGTACGAAGGTGTCATCCTTGATACC CATATCTACCAGGTCTTCAACAACGATCAAGTTGCTTGGTCGGAAGATCAGCACATCCGCGGTATCTGCGACCGT GCCAGCGCCATGACGGATTCCGGGATGTGGACTGTCGTCGGCGAATGGTCTCCAGCAAGGACCGATTGCACCAAA TATCTGAATGGAAGAGGCATTGGCAACCGCTATGAGGGTACCTACCCTGGATCGACCCGCGTCGGCAGCTGCGAA GGGCTTACCGGAGATGCTTCCTCCTTCAGCGCAAGTTACAAGACGTTCTTGAGGAAGTTCTGGGAGGCACAGACT ATCACGTACGAGAAGGGTCAGGGTTGGATCCAATGGACGTGGAAGGCCGAGCAGGCAGACGACTGGTCTTACCAG GCCGGTCTAGAGAATGGATGGATTCCTAAGAATCCTACTGACCGACAATACCCTAATATCTGCGATTAG |
| Length | 1269 |
Gene
| Sequence id | CC1G_06563T0 |
|---|---|
| Sequence |
>CC1G_06563T0 ATGCGTCGAACATTAGTCACTCTTTTAGCCGCCGTTCTTTCTCTCGTTTCCCTGGCCCCCATGGCGTCGTTCGCC TACACCTGGGGGTTCCCGTATGAATCTCAGAAGATCCGGGGCGTCAACCTGGGTGGCTGGCTTGTCACTGAGGTG CGCAACTCGAGAATGCCTCTCCTGAGTTTCAAGGCTTTCGTTGACACTGGGTCCTTTTCCAGCCCTGGATCACGC CTTCGCTTTTCGACAATACCGGTGACCCACGTATTATCGACGAATGGACTTTCGGTCTTTACCAGGATAAGGACA AGGCGTACACCGCGCTCAAGCAGCACTGGGAAACTTGGATCACTGAGAAAGATTTCGAAGATATCGCTGCCGCTG GGTGAGCCCATCTTGCGCGTTGAGTTATCATGGTAAAATCTTACTGACGGTCTTTCTCAGGCTGAATCACGTCCG CCTCCCCATCGGCTACTGGGCGTTCGAGGTCGCGCCGGATGAGCCGTACATCCAAGGTCAACTTGAATACCTCGA CCGAGCGATTACTTGGGCCCAGAAATATAACTTGAAGGTCATCATTGACCTGCATGGTGCGTCACATAGCCTCCA CCCTTTGACCACCAGTTCCCAACATTATGTCCTGCGTAGGCGCGCCTGGCAGTCAGAATGGCTTCGACAACTCTG GCCAGAAGATGGACTACCCGTACGTCTACCTCAGATCCCTGCCATCGCGTCGCATGCATATCTGACAATCGCTTT TACAGTACCTGGCATACAAAGCAGAGCAACGTCGACAGGACCAATGCTGTCATCCAACGAATTGCAGACTTGTAC AAAGATAGAACTGGAGTTGTCCCAGCTATCGCACCTCTCAACGAGTACGTACCACGGTAGCTCGTGACATCTTGA GCGTAGTGATGAACGTTGGTGGCAGGCCTGCTGGTTTCTTCGGAGCAGACGTTCTGAGTGTTACCCGCCAATACT GGCTCGACAGCTACGGTAACATTCGTTACCCTTACGGCAACGACGCGACGAGCAACACCGTCGTCATCATCCACG ACGCTTTTGAGCCCACTGCAAACTGGAAGGACTTCATGCCCTATCCTCAGTACGAAGGTGTCATCCTTGATACCC ATATCTACCAGGTCTTCAACAACGATGTGAGTTAGCCCTGCTCCATGAAGACCTTTTCAAAAGTCCGTTAGTATT GACGGTTCGAGCAGCAAGTTGCTTGGTCGGAAGATCAGCACATCCGCGGTATCTGCGACCGTGCCAGCGCCATGA CGGATTCCGGGATGTGGACTGTCGTCGGCGAATGGTCTCCAGCAAGGACCGATTGCACCAAATATCTGAATGGAA GAGGCATTGGCAACCGCTATGAGGGTACCTACCCTGGATCGACCCGCGTCGGCAGCTGCGAAGGGCTTACCGGAG ATGCTTCCTCCTTCAGCGCAAGTTACAAGACGTTCTTGAGGAAGTTCTGGGAGGCACAGACTATCACGTACGAGA AGGGTCAGGGTTGGATCCAATGGACGTGGAAGGCCGAGCAGGCAGACGACTGGTCTTACCAGGCCGGTCTAGAGA ATGGATGGATTCCTAAGAATCCTACTGACCGACAATACCCTAATATCTGCGATTAG |
| Length | 1631 |