CC1G_06771
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_06771 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8N1L2 | Functional description | Man5C |
| Location | Chr_1:1780448..1782741 | Strand | + |
| Gene length (nt) | 2294 | Transcript length (nt) | 1332 |
| CDS length (nt) | 1332 | Protein length (aa) | 443 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Agrocybe aegerita | Agrae_CAA7266518 | 67.1 | 4.67E-200 | 621 |
| Flammulina velutipes | Flave_chr08AA00896 | 63.4 | 1.192E-187 | 585 |
| Hypsizygus marmoreus strain 51987-8 | Hypma_RDB28597 | 64.2 | 4.789E-183 | 572 |
| Pleurotus ostreatus PC15 | PleosPC15_2_49423 | 65.6 | 3.488E-183 | 572 |
| Pleurotus ostreatus PC9 | PleosPC9_1_95791 | 65.6 | 1.68E-182 | 570 |
| Ganoderma sp. 10597 SS1 v1.0 | Gansp1_125231 | 62.6 | 9.875E-181 | 565 |
| Grifola frondosa | Grifr_OBZ80006 | 60.1 | 2.843E-177 | 555 |
| Pleurotus eryngii ATCC 90797 | Pleery1_1441291 | 61.1 | 7.563E-176 | 551 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 5824 |
| Description | Man5C |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00150 | Cellulase (glycosyl hydrolase family 5) | IPR001547 | 44 | 366 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| SP(Sec/SPI) | 1 | 21 | 0.9972 |
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 24 | 19 |
InterPro
| Accession | Description |
|---|---|
| IPR001547 | Glycoside hydrolase, family 5 |
| IPR045053 | Mannan endo-1,4-beta-mannosidase-like |
| IPR017853 | Glycoside hydrolase superfamily |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
| GO:0071704 | organic substance metabolic process | BP |
KEGG
| KEGG Orthology |
|---|
| K19355 |
EggNOG
| COG category | Description |
|---|---|
| G | Cellulase (glycosyl hydrolase family 5) |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| GH | GH5 | GH5_7 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_06771 across fungi.
Arrow shows the origin of gene family containing CC1G_06771.
Protein
| Sequence id | 5824 |
|---|---|
| Sequence |
>5824 MRQTLLAWLLCLGSLIGTSFAAPGRPSKAPRGFVQTRGRSFELDGKPFYFVGANSYWLPHLTNQRDVEATFREMR DAGIKVLRTWGFNAINATELPEALASNLTYYQVWDGPKWKLNDGPQGLHRLDNIVETAGKYGIKVIIAFTNNWGA YGGSSLYVNWIAGSQGTHDTFYTDRRIVAEYQRYVRVLVSRYKHSPNIFAWELMNEARCRGDMQGGPECVAGSDI ITHWYREQSDFIRSLDRHHLITTGGEGHFYKRDEDIGYWLNGQWVSDYNYNGDAGEDFDVDLTLPNIDFGTYHIY PQYWYANLDNPERTNFTIGAWGLDWIRQHAESAKKANKPVVLEEFGTWGLQNKTEIYPRWVKTALDTDHAHVYDL IFLQRIMPWQFGMLGLKEHGGNRHIKYGDYIIDGASPNDSFTYYKNQTAVWKVFTDAAKVQALKSRRW |
| Length | 443 |
Coding
| Sequence id | CC1G_06771T0 |
|---|---|
| Sequence |
>CC1G_06771T0 ATGCGTCAAACCCTTCTCGCTTGGTTGCTCTGCCTCGGCTCTCTCATCGGGACGTCTTTTGCCGCCCCTGGTCGT CCCTCTAAAGCCCCCCGTGGTTTCGTACAGACAAGGGGAAGGTCCTTTGAATTGGACGGGAAGCCATTCTACTTC GTTGGGGCGAACTCTTATTGGCTTCCACACCTCACCAACCAACGCGATGTTGAGGCCACCTTCAGAGAAATGAGG GACGCTGGCATCAAGGTCCTTCGAACCTGGGGTTTTAACGCTATCAACGCGACTGAACTTCCAGAGGCACTTGCA TCCAACCTGACTTACTATCAGGTTTGGGATGGCCCCAAGTGGAAGTTGAACGATGGTCCTCAAGGTTTGCACCGC CTGGACAACATCGTTGAGACTGCAGGAAAATACGGCATCAAGGTCATTATTGCGTTCACAAACAACTGGGGTGCA TACGGAGGCTCCTCTCTCTATGTTAACTGGATTGCTGGCTCCCAAGGAACCCACGATACCTTCTATACGGACCGA AGGATTGTCGCTGAATACCAGCGTTATGTCCGCGTGCTGGTCAGCCGCTACAAGCATTCGCCCAACATCTTTGCC TGGGAGTTGATGAACGAAGCTCGCTGCAGAGGCGACATGCAGGGCGGACCTGAGTGTGTTGCGGGTTCTGATATC ATCACACATTGGTATAGGGAACAATCTGACTTCATTCGCTCCTTGGATCGCCACCATCTCATCACCACCGGAGGT GAAGGCCATTTCTACAAGCGAGATGAGGATATTGGTTACTGGTTGAATGGTCAATGGGTCTCTGACTACAACTAC AACGGCGATGCTGGTGAAGATTTTGACGTTGATCTCACCCTTCCCAACATTGACTTTGGAACCTACCACATCTAT CCTCAATACTGGTACGCTAACTTGGACAACCCCGAGCGAACAAACTTCACTATCGGCGCTTGGGGCCTTGACTGG ATCCGTCAACACGCCGAATCTGCCAAGAAGGCGAACAAACCAGTCGTCCTTGAAGAATTCGGTACCTGGGGTCTC CAAAACAAGACAGAGATCTATCCTCGATGGGTCAAGACTGCTCTTGACACTGACCATGCACATGTATACGATCTC ATCTTCCTCCAAAGAATCATGCCCTGGCAATTCGGTATGCTCGGCTTGAAAGAGCACGGGGGTAACAGGCATATT AAGTATGGTGACTACATCATCGACGGTGCCTCTCCCAACGACAGCTTCACTTACTATAAGAACCAGACGGCCGTG TGGAAAGTTTTCACGGATGCCGCGAAGGTTCAAGCTTTGAAATCGAGGCGTTGG |
| Length | 1332 |
Transcript
| Sequence id | CC1G_06771T0 |
|---|---|
| Sequence |
>CC1G_06771T0 ATGCGTCAAACCCTTCTCGCTTGGTTGCTCTGCCTCGGCTCTCTCATCGGGACGTCTTTTGCCGCCCCTGGTCGT CCCTCTAAAGCCCCCCGTGGTTTCGTACAGACAAGGGGAAGGTCCTTTGAATTGGACGGGAAGCCATTCTACTTC GTTGGGGCGAACTCTTATTGGCTTCCACACCTCACCAACCAACGCGATGTTGAGGCCACCTTCAGAGAAATGAGG GACGCTGGCATCAAGGTCCTTCGAACCTGGGGTTTTAACGCTATCAACGCGACTGAACTTCCAGAGGCACTTGCA TCCAACCTGACTTACTATCAGGTTTGGGATGGCCCCAAGTGGAAGTTGAACGATGGTCCTCAAGGTTTGCACCGC CTGGACAACATCGTTGAGACTGCAGGAAAATACGGCATCAAGGTCATTATTGCGTTCACAAACAACTGGGGTGCA TACGGAGGCTCCTCTCTCTATGTTAACTGGATTGCTGGCTCCCAAGGAACCCACGATACCTTCTATACGGACCGA AGGATTGTCGCTGAATACCAGCGTTATGTCCGCGTGCTGGTCAGCCGCTACAAGCATTCGCCCAACATCTTTGCC TGGGAGTTGATGAACGAAGCTCGCTGCAGAGGCGACATGCAGGGCGGACCTGAGTGTGTTGCGGGTTCTGATATC ATCACACATTGGTATAGGGAACAATCTGACTTCATTCGCTCCTTGGATCGCCACCATCTCATCACCACCGGAGGT GAAGGCCATTTCTACAAGCGAGATGAGGATATTGGTTACTGGTTGAATGGTCAATGGGTCTCTGACTACAACTAC AACGGCGATGCTGGTGAAGATTTTGACGTTGATCTCACCCTTCCCAACATTGACTTTGGAACCTACCACATCTAT CCTCAATACTGGTACGCTAACTTGGACAACCCCGAGCGAACAAACTTCACTATCGGCGCTTGGGGCCTTGACTGG ATCCGTCAACACGCCGAATCTGCCAAGAAGGCGAACAAACCAGTCGTCCTTGAAGAATTCGGTACCTGGGGTCTC CAAAACAAGACAGAGATCTATCCTCGATGGGTCAAGACTGCTCTTGACACTGACCATGCACATGTATACGATCTC ATCTTCCTCCAAAGAATCATGCCCTGGCAATTCGGTATGCTCGGCTTGAAAGAGCACGGGGGTAACAGGCATATT AAGTATGGTGACTACATCATCGACGGTGCCTCTCCCAACGACAGCTTCACTTACTATAAGAACCAGACGGCCGTG TGGAAAGTTTTCACGGATGCCGCGAAGGTTCAAGCTTTGAAATCGAGGCGTTGGTGA |
| Length | 1332 |
Gene
| Sequence id | CC1G_06771T0 |
|---|---|
| Sequence |
>CC1G_06771T0 ATGCGTCAAACCCTTCTCGCTTGGTTGCTCTGCCTCGGCTCTCTCATCGGGACGTCTTTTGCCGCCCCTGGTCGT CCCTCTAAAGCCCCCCGTGGTTTCGTACAGACAAGGGGAAGGTCCTTTGAATTGGACGGGAAGCCATTCGTGAGT GTCACTGTATCCTTCAGGTTGGGATGGGCCCTCTGACAGACGCTACATTCTAGTACTTCGTTGGGGCGAACTCTT ATGTAGGTGGACTCAGCTCAACGGGTCTGTCGCGCGTAGGATCCTGACTGGTTGTCTAGTGGCTTCCACACCTCA CCAACCAACGCGATGTTGAGGCCACCTTCAGAGAAATGAGGGACGCTGGCATCAAGGTCCTTCGAACCTGGGTAC ATCAATACGAATCCTTCATGGTCCAACAAGCTCTGACTCAAGTGGCGTTACAGGGTTTTAACGCTATCAACGCGA CTGAACTTCCAGAGGCACTTGCATCCAACCTGACTTACTATCAGGTTTGGGATGGCCCCAAGTGGAAGTTGAACG ATGGTCCTCAAGGTTTGCACCGCCTGGACAACATCGTTGAGACTGCAGGAAAATACGGCATCAAGGTCATTATTG CGTTCACAAACAACTGGTAAGAAGCCTTCTGATAATCCAGGAGTAACGGATTTTGAACGTCGTCCTTTCAGGGGT GCATACGGAGTGCGTCTCTGGCATTCTTCAGACCGTACCGTCAGTATTAACACGCGGACAGGGCTCCTCTCTCTA TGTTAACTGGATTGCTGGCTCCCAAGGAACCCACGATACCTTCTATACGGACCGAAGGATTGTCGCTGAATACCG TAAAGGATTGTCCTTCCTTCACTGTCCCCACGGCTAACCGAGCCTAGAGCGTTATGTCCGCGTGCTGGTCAGCCG CTACAAGCATTCGCCCAACATCTTTGCCTGGGAGTTGATGAACGAAGCTCGCTGCAGAGGCGACATGCAGGGCGG ACCTGAGTGTGTTGCGGGTTCTGATATCATCACACATTGGTATAGGGAACAATCTGACTTCATTCGCTCCTTGTA AGGTCCGTCTGTATCGAATCACCCGCAGTTGCCTGATGATTGTTGCTTATAGGGATCGCCACCATCTCATCACCA CCGGAGGTGAAGGCCATTTCTACAAGCGAGATGAGGATATTGGTTACTGGTTGAATGGTCAATGGGTCTCTGACT ACAACTACAACGGCGATGGTAGGGGATATTCGTGACCTGAGATGCGAACAGAAACTCAATTGGTGTTATTACAGC TGGTGAAGATTTTGACGTTGATCTCACCCTTCCCAACATTGACTTTGGAACCTACGTGAGTGGTGGTTGTCACGA AAGGATTATCATGCTATACTTAACGAAACCTACTTCCAGCACATCTATCCTCAATACTGGTATGCACTGGTTCTG TTTCACTTGGGGCTGATTTTGACCTGACAAGAACAGGTACGCTAACTTGGTGGGTATTTTCTGTGCTCTTGTTGG AAACAACCTGGCTAATGGCTCTAATAGGACAACCCCGAGCGAACAAACTTCACTATCGGCGCTTGGGGCCTTGAC TGGATCCGTCAACACGCCGAATGTACGACCTCTTGTTCCTTCCAGTCCATGGCTTCCCAGTGACCTGTTCCCAGC TGCCAAGAAGGCGAACAAACCAGTCGTCCTTGAAGAATTCGGTACCTGGGGTCTCCGTAAGTGTCCATTTGCTAT CGCCGACTTTGATCGCCTGAAGCCAATTGCAAATCAGAAAACAAGACAGAGATCTATCCTCGATGGGTCAAGACT GCTCTTGACACTGACCATGCGTGAGTGGCCCTTTTTTGCACATACTCAACTTAAACTTTCCTGACAATGTAATAG AGGGTGCGTGCTTTAGGTTCGCAGACATGTATACGATCTCATCTTCCTCCAAAGAATCATGCCCTGGCAATTCGG TATGCTCGGCTTGAAAGAGCACGGGGGTAACAGGCATATTAAGTATGGTGACTACATCATCGACGGTGTAAGTAT TGTCTCTTTTGGGGCGTATGTAAAGATGGCAACTCATGCTGCTCTTTCAGGCCTCTCCCAACGACAGTGAGCTAT GTTGGCGAATATGATTTCTCACAGGTAACTCATTGCGCATTAACAGGCTTCACTTACTATAAGAACCAGACGGCC GTGTGGAAAGTTTTCACGTAAGTCCTTTTGTTTCGTTTACAGGAACGAACGCGTGTACTGAGAGCACGCCCAATA GGGATGCCGCGAAGGTTCAAGCTTTGAAATCGAGGCGTTGGTGA |
| Length | 2294 |