Systematic name | CopciAB_359841 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 359841 |
Uniprot id | Functional description | Cellulase (glycosyl hydrolase family 5) | |
Location | scaffold_1:2555253..2557717 | Strand | - |
Gene length (nt) | 2465 | Transcript length (nt) | 1476 |
CDS length (nt) | 1305 | Protein length (aa) | 434 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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Agrocybe aegerita | Agrae_CAA7266518 | 67.1 | 4.67E-200 | 621 |
Flammulina velutipes | Flave_chr08AA00896 | 63.4 | 1.192E-187 | 585 |
Hypsizygus marmoreus strain 51987-8 | Hypma_RDB28597 | 64.2 | 4.789E-183 | 572 |
Pleurotus ostreatus PC15 | PleosPC15_2_49423 | 65.6 | 3.488E-183 | 572 |
Pleurotus ostreatus PC9 | PleosPC9_1_95791 | 65.6 | 1.68E-182 | 570 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_125231 | 62.6 | 9.875E-181 | 565 |
Grifola frondosa | Grifr_OBZ80006 | 60.1 | 2.843E-177 | 555 |
Pleurotus eryngii ATCC 90797 | Pleery1_1441291 | 61.1 | 7.563E-176 | 551 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_359841.T0 |
Description | Cellulase (glycosyl hydrolase family 5) |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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Pfam | PF00150 | Cellulase (glycosyl hydrolase family 5) | IPR001547 | 44 | 377 |
Prediction | Start | End | Score |
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SP(Sec/SPI) | 1 | 21 | 0.9972 |
Domain n | Start | End | Length |
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1 | 5 | 24 | 19 |
Accession | Description |
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IPR045053 | Mannan endo-1,4-beta-mannosidase-like |
IPR001547 | Glycoside hydrolase, family 5 |
IPR017853 | Glycoside hydrolase superfamily |
Go id | Term | Ontology |
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GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
GO:0071704 | organic substance metabolic process | BP |
KEGG Orthology |
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K19355 |
COG category | Description |
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G | Cellulase (glycosyl hydrolase family 5) |
Class | Family | Subfamily |
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GH | GH5 | GH5_7 |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_359841.
Sequence id | CopciAB_359841.T0 |
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Sequence |
>CopciAB_359841.T0 MRQTLLAWLLCLGSLIGTSFAAPGRPSKAPRGFVQTRGRSFELDGKPFYFVGANSYWLPHLTNQRDVEATFREMR DAGIKVLRTWGFNAINATELPEALASNLTYYQVWDGPKWKLNDGPQGLHRLDNIVETAGKYGIKVIIAFTNNWGA YGGSSLYVNWIAGSQGTHDTFYTDRRIVAEYQRYVRVLVSRYKHSPNIFAWELMNEARCRGDMQGGPECVAGSDI ITHWYREQSDFIRSLDRHHLITTGGEGHFYKRDEDIGYWLNGQWVSDYNYNGDAGEDFDVDLTLPNIDFGTYHIY PQYWYANLDNPERTNFTIGAWGLDWIRQHAESAKKANKPVVLEEFGTWGLQNKTEIYPRWVKTALDTDHAGIMPW QFGMLGLKEHGGNRHIKYGDYIIDGASPNDSFTYYKNQTAVWKVFTDAAKVQALKSRRW |
Length | 434 |
Sequence id | CopciAB_359841.T0 |
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Sequence |
>CopciAB_359841.T0 ATGCGTCAAACCCTTCTCGCTTGGTTGCTCTGCCTCGGCTCTCTCATCGGGACGTCTTTTGCCGCCCCTGGTCGT CCCTCTAAAGCCCCCCGTGGTTTCGTACAGACAAGGGGAAGGTCCTTTGAATTGGACGGGAAGCCATTCTACTTC GTTGGGGCGAACTCTTATTGGCTTCCACACCTCACCAACCAACGCGATGTTGAGGCCACCTTCAGAGAAATGAGG GACGCTGGCATCAAGGTCCTTCGAACCTGGGGTTTTAACGCTATCAACGCGACTGAACTTCCAGAGGCACTTGCA TCCAACCTGACTTACTATCAGGTTTGGGATGGCCCCAAGTGGAAGTTGAACGATGGTCCTCAAGGTTTGCACCGC CTGGACAACATCGTTGAGACTGCAGGAAAATACGGCATCAAGGTCATTATTGCGTTCACAAACAACTGGGGTGCA TACGGAGGCTCCTCTCTCTATGTTAACTGGATTGCTGGCTCCCAAGGAACCCACGATACCTTCTATACGGACCGA AGGATTGTCGCTGAATACCAGCGTTATGTCCGCGTGCTGGTCAGCCGCTACAAGCATTCGCCCAACATCTTTGCC TGGGAGTTGATGAACGAAGCTCGCTGCAGAGGCGACATGCAGGGCGGACCTGAGTGTGTTGCGGGTTCTGATATC ATCACACATTGGTATAGGGAACAATCTGACTTCATTCGCTCCTTGGATCGCCACCATCTCATCACCACCGGAGGT GAAGGCCATTTCTACAAGCGAGATGAGGATATTGGTTACTGGTTGAATGGTCAATGGGTCTCTGACTACAACTAC AACGGCGATGCTGGTGAAGATTTTGACGTTGATCTCACCCTTCCCAACATTGACTTTGGAACCTACCACATCTAT CCTCAATACTGGTACGCTAACTTGGACAACCCCGAGCGAACAAACTTCACTATCGGCGCTTGGGGCCTTGACTGG ATCCGTCAACACGCCGAATCTGCCAAGAAGGCGAACAAACCAGTCGTCCTTGAAGAATTCGGTACCTGGGGTCTC CAAAACAAGACAGAGATCTATCCTCGATGGGTCAAGACTGCTCTTGACACTGACCATGCAGGAATCATGCCCTGG CAATTCGGTATGCTCGGCTTGAAAGAGCACGGGGGTAACAGGCATATTAAGTATGGTGACTACATCATCGACGGT GCCTCTCCCAACGACAGCTTCACTTACTATAAGAACCAGACGGCCGTGTGGAAAGTTTTCACGGATGCCGCGAAG GTTCAAGCTTTGAAATCGAGGCGTTGGTGA |
Length | 1305 |
Sequence id | CopciAB_359841.T0 |
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Sequence |
>CopciAB_359841.T0 AGGTTTCGCACCCAAAATGCGTCAAACCCTTCTCGCTTGGTTGCTCTGCCTCGGCTCTCTCATCGGGACGTCTTT TGCCGCCCCTGGTCGTCCCTCTAAAGCCCCCCGTGGTTTCGTACAGACAAGGGGAAGGTCCTTTGAATTGGACGG GAAGCCATTCTACTTCGTTGGGGCGAACTCTTATTGGCTTCCACACCTCACCAACCAACGCGATGTTGAGGCCAC CTTCAGAGAAATGAGGGACGCTGGCATCAAGGTCCTTCGAACCTGGGGTTTTAACGCTATCAACGCGACTGAACT TCCAGAGGCACTTGCATCCAACCTGACTTACTATCAGGTTTGGGATGGCCCCAAGTGGAAGTTGAACGATGGTCC TCAAGGTTTGCACCGCCTGGACAACATCGTTGAGACTGCAGGAAAATACGGCATCAAGGTCATTATTGCGTTCAC AAACAACTGGGGTGCATACGGAGGCTCCTCTCTCTATGTTAACTGGATTGCTGGCTCCCAAGGAACCCACGATAC CTTCTATACGGACCGAAGGATTGTCGCTGAATACCAGCGTTATGTCCGCGTGCTGGTCAGCCGCTACAAGCATTC GCCCAACATCTTTGCCTGGGAGTTGATGAACGAAGCTCGCTGCAGAGGCGACATGCAGGGCGGACCTGAGTGTGT TGCGGGTTCTGATATCATCACACATTGGTATAGGGAACAATCTGACTTCATTCGCTCCTTGGATCGCCACCATCT CATCACCACCGGAGGTGAAGGCCATTTCTACAAGCGAGATGAGGATATTGGTTACTGGTTGAATGGTCAATGGGT CTCTGACTACAACTACAACGGCGATGCTGGTGAAGATTTTGACGTTGATCTCACCCTTCCCAACATTGACTTTGG AACCTACCACATCTATCCTCAATACTGGTACGCTAACTTGGACAACCCCGAGCGAACAAACTTCACTATCGGCGC TTGGGGCCTTGACTGGATCCGTCAACACGCCGAATCTGCCAAGAAGGCGAACAAACCAGTCGTCCTTGAAGAATT CGGTACCTGGGGTCTCCAAAACAAGACAGAGATCTATCCTCGATGGGTCAAGACTGCTCTTGACACTGACCATGC AGGAATCATGCCCTGGCAATTCGGTATGCTCGGCTTGAAAGAGCACGGGGGTAACAGGCATATTAAGTATGGTGA CTACATCATCGACGGTGCCTCTCCCAACGACAGCTTCACTTACTATAAGAACCAGACGGCCGTGTGGAAAGTTTT CACGGATGCCGCGAAGGTTCAAGCTTTGAAATCGAGGCGTTGGTGAGGTTGTCGACGAATGCCAATTGCCATTCT ATCATCCGTGTTCAGCTCCACCGTTCCCGTGACTATTTACTTTGACAGAGTTCTTTGAACTACTCGGGAACTAAA CGATCTCGGCGAGTCCTGTCTGGAAACAATAAACGTTTATTTGTACCTGTG |
Length | 1476 |
Sequence id | CopciAB_359841.T0 |
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Sequence |
>CopciAB_359841.T0 AGGTTTCGCACCCAAAATGCGTCAAACCCTTCTCGCTTGGTTGCTCTGCCTCGGCTCTCTCATCGGGACGTCTTT TGCCGCCCCTGGTCGTCCCTCTAAAGCCCCCCGTGGTTTCGTACAGACAAGGGGAAGGTCCTTTGAATTGGACGG GAAGCCATTCGTGAGTGTCACTGTATCCTTCAGGTTGGGATGGGCCCTCTGACAGACGCTACATTCTAGTACTTC GTTGGGGCGAACTCTTATGTAGGTGGACTCAGCTCAACGGGTCTGTCGCGCGTAGGATCCTGACTGGTTGTCTAG TGGCTTCCACACCTCACCAACCAACGCGATGTTGAGGCCACCTTCAGAGAAATGAGGGACGCTGGCATCAAGGTC CTTCGAACCTGGGTACATCAATACGAATCCTTCATGGTCCAACAAGCTCTGACTCAAGTGGCGTTACAGGGTTTT AACGCTATCAACGCGACTGAACTTCCAGAGGCACTTGCATCCAACCTGACTTACTATCAGGTTTGGGATGGCCCC AAGTGGAAGTTGAACGATGGTCCTCAAGGTTTGCACCGCCTGGACAACATCGTTGAGACTGCAGGAAAATACGGC ATCAAGGTCATTATTGCGTTCACAAACAACTGGTAAGAAGCCTTCTGATAATCCAGGAGTAACGGATTTTGAACG TCGTCCTTTCAGGGGTGCATACGGAGTGCGTCTCTGGCATTCTTCAGACCGTACCGTCGGTATTAACACACGGAC AGGGCTCCTCTCTCTATGTTAACTGGATTGCTGGCTCCCAAGGAACCCACGATACCTTCTATACGGACCGAAGGA TTGTCGCTGAATACCGTAAAGGATTGTCCTTCCTTCACTGTCCCCACGGCTAACCGAGCCTAGAGCGTTATGTCC GCGTGCTGGTCAGCCGCTACAAGCATTCGCCCAACATCTTTGCCTGGGAGTTGATGAACGAAGCTCGCTGCAGAG GCGACATGCAGGGCGGACCTGAGTGTGTTGCGGGTTCTGATATCATCACACATTGGTATAGGGAACAATCTGACT TCATTCGCTCCTTGTAAGGTCCGTCTGTATCGAATCACCCGCAGTTGCCTGATGATTGTTGCTTATAGGGATCGC CACCATCTCATCACCACCGGAGGTGAAGGCCATTTCTACAAGCGAGATGAGGATATTGGTTACTGGTTGAATGGT CAATGGGTCTCTGACTACAACTACAACGGCGATGGTAGGGGATATTCGTGACCTGAGATGCGAACAGAAACTCAA TTGGTGTTACTACAGCTGGTGAAGATTTTGACGTTGATCTCACCCTTCCCAACATTGACTTTGGAACCTACGTGA GTGGTGGTTGTCACGAAAGGATTATCATGCTATACTTAACGAAACCTACTTCCAGCACATCTATCCTCAATACTG GTATGCACTGGTTCTGTTTCACTTGGGGCTGATTTTGACCTGACAAGAACAGGTACGCTAACTTGGTGGGTATTT TCTGTGCTCTTGGTGGAAACAACCTGGCTAATGGCTCTAATAGGACAACCCCGAGCGAACAAACTTCACTATCGG CGCTTGGGGCCTTGACTGGATCCGTCAACACGCCGAATGTACGACCTCTTGTTCCTTCCAGTCCATGGCTTCCCA GTGACCTGTTCCCAGCTGCCAAGAAGGCGAACAAACCAGTCGTCCTTGAAGAATTCGGTACCTGGGGTCTCCGTA AGTGTCCATTTGCTATCGCCGACTTTGATCGCCTGAAGCCAATTGCAAATCAGAAAACAAGACAGAGATCTATCC TCGATGGGTCAAGACTGCTCTTGACACTGACCATGCGTGAGTGGCCCTTTTTTGCACATACTCAACTTAAACTTT CCTGACAATGTAATAGAGGGTGCGTGCTTTAGGTTCGCAGACATGTATACGATCTCATCTTCCTCCAAAGAATCA TGCCCTGGCAATTCGGTATGCTCGGCTTGAAAGAGCACGGGGGTAACAGGCATATTAAGTATGGTGACTACATCA TCGACGGTGTAAGTATTGTCTCTTTTGGGGCGTATGTAAAGATGGCAACTCATGCTGCTCTTTCAGGCCTCTCCC AACGACAGTGAGCTATGTTGGCGAATATGATTTCTCACAGGTAACTCATTGCGCATTGACAGGCTTCACTTACTA TAAGAACCAGACGGCCGTGTGGAAAGTTTTCACGTAAGTCCTTTTGTTTCGTTTACAGGAACGAACGCGTGTACT GAGAGCACGCCCAATAGGGATGCCGCGAAGGTTCAAGCTTTGAAATCGAGGCGTTGGTGAGGTTGTCGACGAATG CCAATTGCCATTCTATCATCCGTGTTCAGCTCCACCGTTCCCGTGACTATTTACTTTGACAGAGTTCTTTGAACT ACTCGGGAACTAAACGATCTCGGCGAGTCCTGTCTGGAAACAATAAACGTTTATTTGTACCTGTG |
Length | 2465 |