CC1G_07595
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_07595 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8NUQ9 | Functional description | Choline dehydrogenase |
| Location | Chr_4:2575530..2578172 | Strand | + |
| Gene length (nt) | 2643 | Transcript length (nt) | 2100 |
| CDS length (nt) | 1989 | Protein length (aa) | 662 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| Aspergillus nidulans | AN8547_gmcA |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Hypsizygus marmoreus strain 51987-8 | Hypma_RDB26168 | 65.2 | 3.618E-258 | 803 |
| Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_121723 | 65.2 | 6.742E-255 | 793 |
| Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_183868 | 65.1 | 1.557E-253 | 789 |
| Agrocybe aegerita | Agrae_CAA7266836 | 54.5 | 1.229E-231 | 726 |
| Pleurotus eryngii ATCC 90797 | Pleery1_1450716 | 57.3 | 3.621E-227 | 713 |
| Pleurotus ostreatus PC9 | PleosPC9_1_55933 | 57.7 | 3.538E-225 | 707 |
| Pleurotus ostreatus PC15 | PleosPC15_2_1047763 | 57.6 | 1.77E-224 | 705 |
| Schizophyllum commune H4-8 | Schco3_2643012 | 56.4 | 3.779E-218 | 687 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 6536 |
| Description | Choline dehydrogenase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 112 | 290 |
| Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 297 | 396 |
| Pfam | PF05199 | GMC oxidoreductase | IPR007867 | 510 | 652 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR012132 | Glucose-methanol-choline oxidoreductase |
| IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
| GO:0050660 | flavin adenine dinucleotide binding | MF |
KEGG
| KEGG Orthology |
|---|
| K00108 |
EggNOG
| COG category | Description |
|---|---|
| E | GMC oxidoreductase |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| AA | AA3 | AA3_2 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_07595 across fungi.
Arrow shows the origin of gene family containing CC1G_07595.
Protein
| Sequence id | 6536 |
|---|---|
| Sequence |
>6536 MASSNNALAPVPEALVELVTKLHEVVTTHPTGVPFIDALSPTTRALLASSSVLAVLVELLVRGQRVKSLKTKAES MNKAKGGSGQYVDSEDLGAAIEEARRLGGLAEKEWEYDVIVVGGGTSGCALAARLSEDPNLKVLLLEAGISGKTL PRSVMPSGFGGLFWGKHVHQLRTEPQQYAGGKTNFWPRAKMLGGCSSINAQMAQYGAPGDFDEWATVTGDDSWAW KNFAAYFRKFERFNPHPEYPDVDMKNKGTDGPVDVGYFNTVTPPSKAFIKACVAVGIPFTPDFNGLNGTLGVSRN LTVATNATATRIIFDTTSLGSAAEPRAVGVEFAKTEQGKRFKVYAKRDVVVSGGAVHTPHLLMLSGVGPQAHLEK LGIHVVKNHPNVGQNLVDHPVIDVYFKDKHNQSANYLKPKSLGDAVKLFKAIWQYKIEKTGGPLAMNFGESAAFV RSDDRSLFPADKFPEQLKDSTSAANSPDLEFFSTPFAYKEHGKIMFDVHTYALHCYLLRPTSKGEVLLKSANPFV QPSVNPNYLQTTEDVKKLARGLYLMLKIAQTEPLASHLDATFTREDLDHQTHLKSPQELEELVRERVETVYHPTT TCKMAPEDKGGVVDTKLRVYGIKGLRVCDASIFPYIISGHTAGGCFAIAEKLADEMKAEYRS |
| Length | 662 |
Coding
| Sequence id | CC1G_07595T0 |
|---|---|
| Sequence |
>CC1G_07595T0 ATGGCCTCTAGCAACAACGCACTCGCCCCTGTCCCTGAGGCCCTTGTCGAGCTAGTCACCAAGCTACACGAAGTC GTTACCACTCATCCTACCGGCGTCCCATTCATCGACGCGCTCTCGCCTACCACCCGTGCACTTCTCGCATCTAGC TCTGTCCTCGCAGTTCTCGTCGAACTCCTCGTCCGCGGTCAACGCGTCAAATCTTTGAAAACCAAAGCTGAGAGC ATGAACAAAGCGAAAGGAGGATCGGGCCAGTATGTCGACTCGGAGGATCTGGGAGCTGCGATAGAGGAGGCGAGG AGACTTGGAGGTCTTGCCGAGAAGGAATGGGAGTACGATGTCATTGTCGTTGGTGGAGGAACGAGTGGATGTGCA TTGGCTGCGCGCCTTTCCGAGGATCCGAATTTGAAGGTTCTTCTCCTCGAGGCTGGAATCTCTGGAAAGACCCTT CCTCGGTCCGTTATGCCCTCAGGCTTCGGTGGTCTGTTCTGGGGTAAACACGTTCACCAGTTGAGAACCGAGCCT CAGCAGTACGCTGGAGGAAAGACAAACTTCTGGCCTCGTGCAAAGATGCTCGGAGGATGCTCTTCGATCAATGCT CAAATGGCTCAATATGGCGCCCCAGGAGACTTTGACGAATGGGCCACAGTCACAGGGGATGACTCTTGGGCATGG AAGAACTTCGCCGCGTACTTTAGGAAGTTTGAGAGGTTCAATCCTCATCCGGAGTACCCCGACGTGGATATGAAG AACAAGGGCACTGACGGACCTGTCGACGTTGGCTACTTTAACACTGTAACCCCGCCTAGCAAGGCCTTTATCAAG GCTTGCGTTGCTGTTGGAATTCCTTTCACCCCGGATTTCAACGGCCTTAATGGAACGCTTGGAGTTAGCAGGAAC CTTACTGTTGCCACCAATGCTACTGCCACCCGCATCATCTTTGACACCACCTCTCTCGGCTCAGCAGCCGAACCC AGGGCAGTCGGCGTTGAGTTTGCAAAGACCGAGCAAGGGAAGAGGTTCAAGGTCTATGCAAAGCGGGACGTTGTC GTTTCCGGAGGAGCTGTCCACACCCCTCACCTCCTCATGCTCTCAGGTGTAGGACCTCAGGCCCACCTAGAGAAA CTCGGTATCCACGTTGTGAAGAACCATCCCAACGTCGGTCAGAACCTTGTCGACCACCCTGTCATCGACGTGTAC TTCAAGGACAAGCATAACCAGAGTGCAAACTATTTGAAACCCAAGAGTCTCGGTGATGCCGTCAAGTTGTTCAAG GCTATCTGGCAGTACAAGATCGAGAAGACAGGCGGACCTTTGGCTATGAATTTTGGTGAATCGGCCGCGTTTGTG AGGTCGGATGATAGGAGCTTGTTCCCGGCGGACAAGTTCCCTGAGCAGTTGAAGGATAGCACTTCTGCCGCCAAC AGCCCTGATCTCGAGTTCTTCTCCACGCCATTTGCATACAAGGAGCATGGAAAGATTATGTTTGATGTGCACACT TACGCTTTACACTGCTACCTGCTACGCCCCACGAGCAAAGGAGAAGTCCTCCTCAAGTCCGCCAACCCCTTCGTC CAGCCGAGCGTGAACCCCAACTACCTCCAAACCACCGAAGACGTGAAGAAACTCGCTCGGGGCCTCTACCTCATG CTCAAGATCGCCCAAACCGAACCTCTCGCCTCGCATCTCGATGCTACCTTCACGCGTGAAGATCTCGATCACCAA ACTCACCTCAAGTCGCCTCAGGAATTGGAGGAACTCGTGAGGGAGCGTGTCGAGACCGTGTATCACCCCACGACG ACGTGCAAGATGGCACCAGAGGACAAGGGTGGTGTTGTTGATACCAAGTTGAGGGTGTATGGCATCAAGGGGTTG AGAGTGTGCGATGCTAGTATTTTCCCCTACATTATTTCTGGACACACGGCTGGTGGATGCTTTGCTATTGCCGAG AAGCTGGCAGATGAGATGAAGGCTGAGTATCGCTCC |
| Length | 1989 |
Transcript
| Sequence id | CC1G_07595T0 |
|---|---|
| Sequence |
>CC1G_07595T0 ATGGCCTCTAGCAACAACGCACTCGCCCCTGTCCCTGAGGCCCTTGTCGAGCTAGTCACCAAGCTACACGAAGTC GTTACCACTCATCCTACCGGCGTCCCATTCATCGACGCGCTCTCGCCTACCACCCGTGCACTTCTCGCATCTAGC TCTGTCCTCGCAGTTCTCGTCGAACTCCTCGTCCGCGGTCAACGCGTCAAATCTTTGAAAACCAAAGCTGAGAGC ATGAACAAAGCGAAAGGAGGATCGGGCCAGTATGTCGACTCGGAGGATCTGGGAGCTGCGATAGAGGAGGCGAGG AGACTTGGAGGTCTTGCCGAGAAGGAATGGGAGTACGATGTCATTGTCGTTGGTGGAGGAACGAGTGGATGTGCA TTGGCTGCGCGCCTTTCCGAGGATCCGAATTTGAAGGTTCTTCTCCTCGAGGCTGGAATCTCTGGAAAGACCCTT CCTCGGTCCGTTATGCCCTCAGGCTTCGGTGGTCTGTTCTGGGGTAAACACGTTCACCAGTTGAGAACCGAGCCT CAGCAGTACGCTGGAGGAAAGACAAACTTCTGGCCTCGTGCAAAGATGCTCGGAGGATGCTCTTCGATCAATGCT CAAATGGCTCAATATGGCGCCCCAGGAGACTTTGACGAATGGGCCACAGTCACAGGGGATGACTCTTGGGCATGG AAGAACTTCGCCGCGTACTTTAGGAAGTTTGAGAGGTTCAATCCTCATCCGGAGTACCCCGACGTGGATATGAAG AACAAGGGCACTGACGGACCTGTCGACGTTGGCTACTTTAACACTGTAACCCCGCCTAGCAAGGCCTTTATCAAG GCTTGCGTTGCTGTTGGAATTCCTTTCACCCCGGATTTCAACGGCCTTAATGGAACGCTTGGAGTTAGCAGGAAC CTTACTGTTGCCACCAATGCTACTGCCACCCGCATCATCTTTGACACCACCTCTCTCGGCTCAGCAGCCGAACCC AGGGCAGTCGGCGTTGAGTTTGCAAAGACCGAGCAAGGGAAGAGGTTCAAGGTCTATGCAAAGCGGGACGTTGTC GTTTCCGGAGGAGCTGTCCACACCCCTCACCTCCTCATGCTCTCAGGTGTAGGACCTCAGGCCCACCTAGAGAAA CTCGGTATCCACGTTGTGAAGAACCATCCCAACGTCGGTCAGAACCTTGTCGACCACCCTGTCATCGACGTGTAC TTCAAGGACAAGCATAACCAGAGTGCAAACTATTTGAAACCCAAGAGTCTCGGTGATGCCGTCAAGTTGTTCAAG GCTATCTGGCAGTACAAGATCGAGAAGACAGGCGGACCTTTGGCTATGAATTTTGGTGAATCGGCCGCGTTTGTG AGGTCGGATGATAGGAGCTTGTTCCCGGCGGACAAGTTCCCTGAGCAGTTGAAGGATAGCACTTCTGCCGCCAAC AGCCCTGATCTCGAGTTCTTCTCCACGCCATTTGCATACAAGGAGCATGGAAAGATTATGTTTGATGTGCACACT TACGCTTTACACTGCTACCTGCTACGCCCCACGAGCAAAGGAGAAGTCCTCCTCAAGTCCGCCAACCCCTTCGTC CAGCCGAGCGTGAACCCCAACTACCTCCAAACCACCGAAGACGTGAAGAAACTCGCTCGGGGCCTCTACCTCATG CTCAAGATCGCCCAAACCGAACCTCTCGCCTCGCATCTCGATGCTACCTTCACGCGTGAAGATCTCGATCACCAA ACTCACCTCAAGTCGCCTCAGGAATTGGAGGAACTCGTGAGGGAGCGTGTCGAGACCGTGTATCACCCCACGACG ACGTGCAAGATGGCACCAGAGGACAAGGGTGGTGTTGTTGATACCAAGTTGAGGGTGTATGGCATCAAGGGGTTG AGAGTGTGCGATGCTAGTATTTTCCCCTACATTATTTCTGGACACACGGCTGGTGGATGCTTTGCTATTGCCGAG AAGCTGGCAGATGAGATGAAGGCTGAGTATCGCTCCTAAGGGTTTTGGGCTAGGGGATTTCTTGTGATTTATTCG CTTGTTTGTATCTACTGTACTCTCCTTGAACCTGTTGCATGTAATGATATCACTTCATTCTTTTCAGTTTGACTT |
| Length | 2100 |
Gene
| Sequence id | CC1G_07595T0 |
|---|---|
| Sequence |
>CC1G_07595T0 ATGGCCTCTAGCAACAACGCACTCGCCCCTGTCCCTGAGGCCCTTGTCGAGCTAGTCACCAAGCTACACGAAGTC GTTACCACTCATCCTACCGGCGTCCCATTCATCGACGCGCTCTCGCCTACCACCCGTGCACTTCTCGCATCTAGC TCTGTCCTCGCAGTTCTCGTCGAACTCCTCGTCCGCGGTCAACGCGTCAAATCTTTGAAAACCAAAGCTGAGAGC ATGAACAAAGCGAAAGGAGGATCGGGCCAGTATGTCGACTCGGAGGATCTGGGAGCTGCGATAGAGGAGGCGAGG AGACTTGGAGGTCTTGCCGAGAAGGAATGGGAGTACGATGTCATTGTCGTTGGTGGAGGAACGAGTGGATGTGCA TTGGCTGCGCGCCTTTCCGAGGATCCGAATTTGAAGGTTCTTCTCCTCGAGGCTGGAATCTCGTATGTCTTTTTG ATTCTGCCTGTAGGTTGTGCGCTGATGAGGTTTGAATAGTGGAAAGACCCTTCCTCGGTCCGTTATGCCCTCAGG CTTCGGTGGTCTGTTCTGGGGTAAACACGTTCACCAGTTGAGAACCGAGCCTCAGCAGTACGCTGGAGGAAAGAC AAACTTCTGGCCTCGTGCAAAGATGCTCGGAGGATGCTCTTCGATCAATGCTCAAATGTACGTCTTCCACTCCCT CTTGTTCACCACTATGAATTGACCCTCTACTTAGGGCTCAATATGGCGCCCCAGGAGACTTTGACGAATGGGCCA CAGTCACAGGGGATGACTCTTGGGCATGGAAGAACTTCGCCGCGTACTTTAGGAAGTTTGAGAGGTTCAATCCTC ATCCGGAGTACCCCGACGTGGATATGAAGAACAAGGGCACTGACGGACCTGTCGACGTTGGCTACTTTAACACTG TAACCCCGCCTAGCAAGGCCTTTATCAAGGCTTGCGTTGCTGTTGGAATTCCTTTCACCCCGGATTTCAACGGCC TTAATGGAACGCTTGGAGTTAGCAGGGTAAGTATCGACACGTTCCCACCAAGAAAGTGCCCTAACCATTTCCATT CACGTTTCTCTGATAGATCAGTAAGGTTCTTCCATCACTTTCGAAAGACTTATTTTGACGCGTTTCATTACAGTG ACTTACGTTTCAAACCAATACAGGCGCGTATCGTCTGAGACAGCCTATCTCACCCCCGAGGTTCTCGGGCGCAAG AACCTTACTGTTGCCACCAATGCTACTGCCACCCGCATCATCTTTGACACCACCTCTCTCGGCTCAGCAGCCGAA CCCAGGGCAGTCGGCGTTGAGTTTGCAAAGACCGAGCAAGGGAAGAGGTTCAAGGTCTATGCAAAGCGGGACGTT GTCGTTTCGTGAGTCGCGCCTTGCCCTCCCACTTCCACTTTGCCCTGACCTGGACTTTGTAGCGGAGGAGCTGTC CACACCCCTCACCTCCTCATGCTCTCAGGTGTAGGACCTCAGGCCCACCTAGAGAAACTCGGTATCCACGTTGTG AAGAACCATCCCAACGTCGGTCAGAACCTTGTCGACCACCCTGTCATCGACGTGTACTTCAAGGACAAGCATAAC CAGAGTGCAAACTATTTGAAACCCAAGAGTCTCGGTGATGCCGTCAAGTTGTTCAAGGCTATCTGGCAGTACAAG ATCGAGAAGACAGGCGGACCTTTGGCTATGAATGTGAGCTTTTTCAATGGATGCCAACGAGGATTGTGGTTGTGC TGATACGGCGGTATCATAGTTTGGTGAATCGGCCGCGTTTGTGAGGTCGGATGATAGGAGCTTGTTCCCGGCGGA CAAGTTCCCTGAGCAGTTGAAGGATAGCACTTCTGCCGCCAACAGCCCTGATCTCGAGTTCTTCTCCACGCCATT TGCATACAAGGAGCATGGAAAGATTATGTTTGATGTGCACACTTACGCTTTACACTGCTACCTGCTACGGTACGT CCGATCCAGCTGGTCCTTTGGAACGGTTCTAATCTCTGGATCTTCATTAGCCCCACGAGCAAAGGAGAAGTCCTC CTCAAGTCCGCCAACCCCTTCGTCCAGCCGAGCGTGAACCCCAACTACCTCCAAACCACCGAAGACGTGAAGAAA CTCGCTCGGGGCCTCTACCTCATGCTCAAGATCGCCCAAACCGAACCTCTCGCCTCGCATCTCGATGCTACCTTC ACGCGTGAAGATCTCGATCACCAAACTCACCTCAAGTCGCCTCAGGAATTGGAGGAACTCGTGAGGGAGCGTGTC GAGACCGTGTATCACCCCACGACGACGTGCAAGATGGCACCAGAGGACAAGGGTGGTGTTGTTGATACCAAGTTG AGGGTGTATGGCATCAAGGGGTTGAGAGTGTGCGATGCTAGTATTTTCCCCTACATTATTTCTGGACACACGGTG AGTAGTTCTGTTGTCTGGCTGGAATCGTTGTGGGGATTACTGATATGTTGTTTGTTCCAATTTTAGGCTGGTGGA TGCTTTGCTATTGCCGAGAAGCTGGCAGATGAGATGAAGGCTGAGTATCGCTCCTAAGGGTTTTGGGCTAGGGGA TTTCTTGTGATTTATTCGCTTGTTTGTATCTACTGTACTCTCCTTGAACCTGTTGCATGTAATGATATCACTTCA TTCTTTTCAGTTTGACTT |
| Length | 2643 |