CC1G_08443
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_08443 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8NLY0 | Functional description | PKL/CAK/Fmp29-like protein kinase subdomain-containing protein |
| Location | Chr_12:591719..592492 | Strand | + |
| Gene length (nt) | 774 | Transcript length (nt) | 672 |
| CDS length (nt) | 672 | Protein length (aa) | 223 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits | |
|---|---|---|---|---|---|
| No records | |||||
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 7264 |
| Description | PKL/CAK/Fmp29-like protein kinase subdomain-containing protein |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| No records | |||||
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| No records | |
GO
| Go id | Term | Ontology |
|---|---|---|
| No records | ||
KEGG
| KEGG Orthology |
|---|
| No records |
EggNOG
| COG category | Description |
|---|---|
| No records | |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| No records | ||
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_08443 across fungi.
Arrow shows the origin of gene family containing CC1G_08443.
Protein
| Sequence id | 7264 |
|---|---|
| Sequence |
>7264 MDYAMRNLAFDDDITTITAFLDWDDVAIIPFILCSKYVAEIHPDWGGEDWERETGGFSSIQPPAAEGVTDEELEN VFQRRLYAAAFLTEKKRMEEERTTATGEWQAVANPMDRTPEPNEEDTDEEDAVSSDSEDVEEEVDSEEERRLQDE CDRAFERRELVFYDHFRKEYRKRLERLDPRFATPGFWKMAEDALKIHHLVTYGAEEWIAYYGQLRVRAMPARE |
| Length | 223 |
Coding
| Sequence id | CC1G_08443T0 |
|---|---|
| Sequence |
>CC1G_08443T0 ATGGACTATGCGATGCGCAACTTAGCCTTTGACGACGATATCACGACCATCACGGCGTTTCTGGATTGGGACGAC GTCGCCATTATACCCTTCATCCTCTGTTCCAAGTACGTGGCCGAGATCCATCCGGATTGGGGAGGTGAAGACTGG GAGAGAGAAACTGGTGGCTTCAGCTCCATTCAGCCTCCAGCTGCAGAGGGTGTAACGGATGAAGAACTCGAAAAC GTTTTTCAAAGAAGGCTGTACGCCGCGGCCTTTCTGACGGAGAAGAAACGGATGGAAGAAGAGAGAACCACAGCG ACAGGAGAGTGGCAGGCTGTCGCTAATCCGATGGACAGGACACCCGAACCAAATGAGGAGGACACGGATGAAGAA GACGCTGTTAGTTCAGATAGCGAAGACGTGGAAGAGGAAGTGGATTCGGAGGAAGAAAGGCGTTTGCAGGACGAG TGTGACAGGGCATTCGAGAGGCGAGAGCTCGTATTTTACGACCACTTCCGCAAAGAGTACAGGAAGAGGTTGGAG CGCCTTGACCCAAGGTTTGCAACGCCCGGATTCTGGAAGATGGCGGAGGATGCGTTGAAGATTCACCATCTTGTC ACTTACGGGGCCGAGGAGTGGATTGCGTATTACGGCCAGCTTAGGGTGCGGGCAATGCCCGCGAGAGAG |
| Length | 672 |
Transcript
| Sequence id | CC1G_08443T0 |
|---|---|
| Sequence |
>CC1G_08443T0 ATGGACTATGCGATGCGCAACTTAGCCTTTGACGACGATATCACGACCATCACGGCGTTTCTGGATTGGGACGAC GTCGCCATTATACCCTTCATCCTCTGTTCCAAGTACGTGGCCGAGATCCATCCGGATTGGGGAGGTGAAGACTGG GAGAGAGAAACTGGTGGCTTCAGCTCCATTCAGCCTCCAGCTGCAGAGGGTGTAACGGATGAAGAACTCGAAAAC GTTTTTCAAAGAAGGCTGTACGCCGCGGCCTTTCTGACGGAGAAGAAACGGATGGAAGAAGAGAGAACCACAGCG ACAGGAGAGTGGCAGGCTGTCGCTAATCCGATGGACAGGACACCCGAACCAAATGAGGAGGACACGGATGAAGAA GACGCTGTTAGTTCAGATAGCGAAGACGTGGAAGAGGAAGTGGATTCGGAGGAAGAAAGGCGTTTGCAGGACGAG TGTGACAGGGCATTCGAGAGGCGAGAGCTCGTATTTTACGACCACTTCCGCAAAGAGTACAGGAAGAGGTTGGAG CGCCTTGACCCAAGGTTTGCAACGCCCGGATTCTGGAAGATGGCGGAGGATGCGTTGAAGATTCACCATCTTGTC ACTTACGGGGCCGAGGAGTGGATTGCGTATTACGGCCAGCTTAGGGTGCGGGCAATGCCCGCGAGAGAGTAA |
| Length | 672 |
Gene
| Sequence id | CC1G_08443T0 |
|---|---|
| Sequence |
>CC1G_08443T0 ATGGACTATGCGATGCGCAACTTAGCCTTTGACGACGATATCACGACCATCACGGCGTTTCTGGATTGGGACGAC GTCGCCATTATACCCTTCATCCTCTGTTCCAAGTACGTGGCCGAGATCCATCCGGATTGGGGAGGTGAAGACTGG GAGAGAGAAACTGGTGGCTTCAGCTCCATTCAGCCTCCAGCTGCAGAGGGTGTAACGGATGAAGAACTCGAAAAC GTTTTTCAAAGAAGGCTGTACGCCGCGGCCTTTCTGACGGAGAAGAAACGGATGGAAGAAGAGAGAACCACAGCG ACAGGAGAGTGGCAGGCTGTCGCTAATCCGATGGACAGGACACCCGAACCAAATGAGGAGGACACGGATGAAGAA GACGCTGTTAGTTCAGATAGCGAAGACGTGGAAGAGGAAGTGGATTCGGAGGAAGAAAGGCGTTTGCAGGACGAG TGTGACAGGGCATTCGAGAGGCGAGAGCTCGTATTTTACGACCACTTCCGCAAAGAGTACAGGAAGAGGTTGGAG CGCCTTGACCCAAGGTTTGCAACGCCCGGATTCTGGAAGATGGCGGAGGATGCGTTGAAGATTCACCATCTTGTC ACTTACGGGGCCGAGGAGTGGATGTGCAAGGCGGAATGGATCGAATTCCGCGCTGAACAACTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTGGTGGAGCTATAGGCCTTTACTGCGCACAGTAGTGCGTATTACGGCCAGCTTAGGGTG CGGGCAATGCCCGCGAGAGAGTAA |
| Length | 774 |