CC1G_08482
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_08482 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8NM36 | Functional description | GMC_OxRdtase_N domain-containing protein |
| Location | Chr_12:688646..689579 | Strand | - |
| Gene length (nt) | 934 | Transcript length (nt) | 675 |
| CDS length (nt) | 675 | Protein length (aa) | 224 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits | |
|---|---|---|---|---|---|
| No records | |||||
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 7291 |
| Description | GMC_OxRdtase_N domain-containing protein |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 33 | 219 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| SP(Sec/SPI) | 1 | 19 | 0.9988 |
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR012132 | Glucose-methanol-choline oxidoreductase |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
| GO:0050660 | flavin adenine dinucleotide binding | MF |
KEGG
| KEGG Orthology |
|---|
| K00108 |
EggNOG
| COG category | Description |
|---|---|
| E | Aryl-alcohol oxidase |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| AA | AA3 | AA3_2 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_08482 across fungi.
Arrow shows the origin of gene family containing CC1G_08482.
Protein
| Sequence id | 7291 |
|---|---|
| Sequence |
>7291 MNRISALALLVCLALPAFATIQDSITKFPKTDYDFVIVGGGQAGCVVANRLTENPRFNVLVIEAGPSHENVLNAQ VPGFSLELRNTTYDYNYTSTPVPHLNNRVFSVTRGRILGGCSSHNGMFYTRGSSSDYDRWATVTGDPGWSWKKLF PYILKNERWVKPNRDVDITGMYDPKVHNTKGMTFVSLTNFPDDSDAKIRQAADEIGGDFGWNVDYNSGDPLGVG |
| Length | 224 |
Coding
| Sequence id | CC1G_08482T0 |
|---|---|
| Sequence |
>CC1G_08482T0 ATGAACCGCATCTCGGCACTCGCTCTTCTGGTTTGTCTCGCTCTTCCAGCTTTCGCGACGATTCAGGACTCCATT ACCAAGTTCCCCAAAACTGACTACGACTTTGTAATAGTCGGAGGAGGCCAGGCGGGATGCGTAGTGGCTAACAGA CTAACGGAAAACCCTCGATTCAACGTCCTGGTCATCGAGGCAGGCCCGAGCCACGAGAACGTCTTGAACGCGCAA GTACCGGGGTTTAGTCTTGAACTCCGAAATACCACCTACGATTACAACTACACGAGTACACCTGTACCGCATCTC AACAACCGAGTTTTTTCGGTGACCCGTGGGCGGATTCTGGGGGGCTGTAGCTCGCACAATGGGATGTTCTACACC CGTGGTTCTTCCTCTGACTATGATCGATGGGCTACCGTCACCGGTGACCCAGGGTGGTCTTGGAAGAAACTCTTT CCCTACATTCTCAAGAACGAACGTTGGGTTAAGCCAAATCGCGATGTGGATATCACAGGGATGTACGACCCAAAG GTCCACAACACCAAGGGGATGACCTTTGTCAGCCTCACGAACTTCCCAGACGATTCCGATGCAAAGATCAGGCAG GCTGCAGACGAAATTGGAGGCGATTTCGGATGGAACGTGGATTACAATAGTGGGGATCCCTTGGGTGTCGGA |
| Length | 675 |
Transcript
| Sequence id | CC1G_08482T0 |
|---|---|
| Sequence |
>CC1G_08482T0 ATGAACCGCATCTCGGCACTCGCTCTTCTGGTTTGTCTCGCTCTTCCAGCTTTCGCGACGATTCAGGACTCCATT ACCAAGTTCCCCAAAACTGACTACGACTTTGTAATAGTCGGAGGAGGCCAGGCGGGATGCGTAGTGGCTAACAGA CTAACGGAAAACCCTCGATTCAACGTCCTGGTCATCGAGGCAGGCCCGAGCCACGAGAACGTCTTGAACGCGCAA GTACCGGGGTTTAGTCTTGAACTCCGAAATACCACCTACGATTACAACTACACGAGTACACCTGTACCGCATCTC AACAACCGAGTTTTTTCGGTGACCCGTGGGCGGATTCTGGGGGGCTGTAGCTCGCACAATGGGATGTTCTACACC CGTGGTTCTTCCTCTGACTATGATCGATGGGCTACCGTCACCGGTGACCCAGGGTGGTCTTGGAAGAAACTCTTT CCCTACATTCTCAAGAACGAACGTTGGGTTAAGCCAAATCGCGATGTGGATATCACAGGGATGTACGACCCAAAG GTCCACAACACCAAGGGGATGACCTTTGTCAGCCTCACGAACTTCCCAGACGATTCCGATGCAAAGATCAGGCAG GCTGCAGACGAAATTGGAGGCGATTTCGGATGGAACGTGGATTACAATAGTGGGGATCCCTTGGGTGTCGGATAA |
| Length | 675 |
Gene
| Sequence id | CC1G_08482T0 |
|---|---|
| Sequence |
>CC1G_08482T0 ATGAACCGCATCTCGGCACTCGCTCTTCTGGTTTGTCTCGCTCTTCCAGCTTTCGCGACGATTCAGGACTCCATT ACCAAGTTCCCCAAAACTGACTACGACTTTGTAATAGTCGGAGGTGCGTACAGTATCCACCGTGCCTTGCACCCT TTGTCCTCACCCATCGTCTTCCAGGAGGCCAGGCGGGATGCGTAGTGGCTAACAGACTAACGGAAAACCCTCGAT TCAACGTCCTGGTCATCGAGGCAGGCCCGAGGTTTGTTGTTCATCTCGATGAGTCTACTCGAACGAACTTACTGG CCATTCATTAATATTCATTCTGAATCCTCCAGCCACGAGAACGTCTTGAACGCGCAAGTACCGGGGTTTAGTCTT GAACTCCGAAATACCACCTACGATTACAACTACACGAGTACACCTGTACCGCATCTCAACAACCGAGTTTTTTCG GTGACCCGTGGGCGGATTCTGGGGGGCTGTAGCTCGCACAGTGAGAATTCAATGGCTCGGCTTGTTTTGAAATTC CGTATTCACCAACCTCGTCGATTGTAGATGGGATGTTCTACACCCGTGGTTCTTCCTCTGACTATGATCGATGGG CTACCGTCACCGGTGACCCAGGGTGGTCTTGGAAGAAACTCTTTCCCTACATTCTCAAGGTCAGCACGTTGATGT TTTTTTTTGGAAGTCGTGCCGTCAGCACTAACACAACGCCGTTATCCAGAACGAACGTTGGGTTAAGCCAAATCG CGATGTGGATATCACAGGGATGTACGACCCAAAGGTCCACAACACCAAGGGGATGACCTTTGTCAGCCTCACGAA CTTCCCAGACGATTCCGATGCAAAGATCAGGCAGGCTGCAGACGAAATTGGAGGCGATTTCGGATGGAACGTGGA TTACAATAGTGGGGATCCCTTGGGTGTCGGATAA |
| Length | 934 |