CC1G_08727
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_08727 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8NIX8 | Functional description | GMC oxidoreductase |
| Location | Chr_10:920021..922758 | Strand | - |
| Gene length (nt) | 2738 | Transcript length (nt) | 1827 |
| CDS length (nt) | 1827 | Protein length (aa) | 608 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| Neurospora crassa | NCU09798 |
| Aspergillus nidulans | AN8329 |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Agrocybe aegerita | Agrae_CAA7262709 | 55.4 | 2.897E-228 | 712 |
| Hypsizygus marmoreus strain 51987-8 | Hypma_RDB23961 | 55.8 | 7.227E-228 | 711 |
| Schizophyllum commune H4-8 | Schco3_2610771 | 43.8 | 2.754E-160 | 515 |
| Ganoderma sp. 10597 SS1 v1.0 | Gansp1_149638 | 45.7 | 4.919E-160 | 514 |
| Pleurotus ostreatus PC15 | PleosPC15_2_1108891 | 44 | 3.726E-152 | 491 |
| Pleurotus ostreatus PC9 | PleosPC9_1_88910 | 44 | 3.647E-152 | 491 |
| Grifola frondosa | Grifr_OBZ73019 | 42.8 | 9.45E-151 | 487 |
| Lentinula edodes NBRC 111202 | Lenedo1_1236353 | 44.6 | 5.782E-148 | 479 |
| Flammulina velutipes | Flave_chr08AA00306 | 42.1 | 2.597E-147 | 477 |
| Lentinula edodes W1-26 v1.0 | Lentinedodes1_4827 | 43.7 | 1.307E-135 | 443 |
| Pleurotus eryngii ATCC 90797 | Pleery1_1513595 | 39.2 | 4.606E-128 | 421 |
| Auricularia subglabra | Aurde3_1_1353711 | 37.8 | 2.659E-119 | 396 |
| Lentinula edodes B17 | Lened_B_1_1_14898 | 37.2 | 1.156E-107 | 361 |
| Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_120654 | 37.4 | 1.138E-106 | 358 |
| Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_131891 | 36.8 | 6.935E-102 | 344 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 7474 |
| Description | GMC oxidoreductase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 15 | 326 |
| Pfam | PF05199 | GMC oxidoreductase | IPR007867 | 462 | 599 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal |
| IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR012132 | Glucose-methanol-choline oxidoreductase |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
| GO:0050660 | flavin adenine dinucleotide binding | MF |
KEGG
| KEGG Orthology |
|---|
| No records |
EggNOG
| COG category | Description |
|---|---|
| E | Gmc oxidoreductase |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| AA | AA3 | AA3_2 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_08727 across fungi.
Arrow shows the origin of gene family containing CC1G_08727.
Protein
| Sequence id | 7474 |
|---|---|
| Sequence |
>7474 MPLIANPEEIANKTFDYVVVGAGTAGLTLATRLTEDENVSVLVLEAGIRHHGDPNIDVPAQYGATFMQPKYDWAF KTVKQKHSNDNEHVWARGKGLGGSSNMNFFCWIKPPAEDVDAIEKLGNPGWNWADYEAYSKKSETFHPAVPEIAE KYPHTYNAKFRGTSGPIQVTVPLHAHTLDEIWQNTLANKGVRKIEDPYGGDITGTWIAANNVDPKTWKRSYSATA YWEPNQHRPNLHVITEAYVTRIVWADEKDSEGNLVATGVQFVHGSTERTVLASKEVVLSAGTVKTPQILELSGVG KPEILSKFGIDTKLNLPGVGENVQEHHFMWVIYELDTTKGDHQTLDMFFEPGYVQESLKLHAEGKGLHRTGITSF AFLPLSSRDPKAAAALIDELEADLKKKKESGEISPALAKQYDIQLEILRNDKVPDMEFIVFPGYFMCPASQGTGR RFMTVISSLNHPISRGYIHIKSNNPLDDPEIDANYFGHNFDLKVLLEHVKYIRSLEDTEPFKSHTIKEVVPGPEC ASDADIENHIKNSHITTFHTVGSASMLPREDGGVVDPKLKVYGTKNLRVADLSIVPLHIAAHMQATAYVIGEKAA DLIKADAK |
| Length | 608 |
Coding
| Sequence id | CC1G_08727T0 |
|---|---|
| Sequence |
>CC1G_08727T0 ATGCCTCTCATCGCCAACCCTGAAGAAATTGCCAACAAGACCTTCGACTATGTCGTCGTCGGCGCAGGTACCGCT GGTTTGACCCTTGCCACTCGCCTCACCGAAGATGAGAATGTTAGCGTCCTCGTCCTCGAGGCCGGTATCCGCCAC CACGGAGACCCCAACATCGATGTCCCGGCCCAATACGGTGCTACTTTCATGCAACCCAAGTACGACTGGGCCTTC AAGACTGTCAAGCAAAAGCACTCCAACGACAATGAACACGTCTGGGCTCGTGGCAAAGGCCTTGGTGGAAGCTCA AACATGAACTTCTTCTGCTGGATCAAGCCTCCTGCGGAGGATGTCGATGCTATTGAGAAGCTTGGCAACCCTGGC TGGAACTGGGCCGATTATGAAGCTTACTCCAAGAAATCTGAGACGTTCCACCCTGCAGTCCCCGAGATTGCTGAG AAATACCCTCATACCTACAACGCGAAGTTCCGTGGAACCTCGGGGCCCATTCAAGTGACCGTACCCCTCCATGCC CACACGCTTGACGAGATCTGGCAAAACACACTCGCTAATAAGGGCGTGAGGAAAATCGAGGACCCCTATGGTGGG GATATCACGGGAACCTGGATCGCTGCTAACAACGTCGATCCGAAAACATGGAAACGCTCCTACTCCGCCACTGCC TACTGGGAGCCTAATCAACACCGTCCTAACCTTCACGTGATCACCGAGGCTTATGTTACCCGTATCGTCTGGGCG GATGAGAAGGATAGTGAGGGCAACCTGGTTGCTACTGGGGTCCAGTTCGTCCATGGCAGCACCGAAAGGACCGTT CTGGCGTCCAAGGAAGTCGTCTTGAGCGCTGGTACGGTGAAGACTCCCCAGATCCTCGAATTGTCCGGCGTCGGT AAACCAGAGATCCTCAGCAAGTTTGGTATCGATACCAAGTTGAACCTTCCGGGCGTCGGCGAGAACGTTCAGGAG CACCACTTCATGTGGGTGATCTACGAGTTGGACACTACCAAGGGTGACCATCAAACTCTCGATATGTTCTTCGAA CCTGGCTACGTCCAAGAATCCCTGAAGCTGCATGCCGAAGGCAAAGGTCTCCATCGTACCGGTATCACTTCCTTT GCCTTCTTGCCCTTATCGAGCAGAGACCCGAAGGCCGCGGCTGCCTTGATTGATGAGCTCGAAGCTGACCTCAAG AAGAAGAAGGAGAGCGGAGAGATCTCGCCTGCTCTTGCCAAGCAATATGACATCCAACTGGAGATTCTTCGCAAT GACAAGGTTCCTGACATGGAATTCATTGTGTTCCCTGGTTATTTCATGTGTCCCGCGAGCCAGGGTACTGGTCGA CGATTCATGACCGTCATCTCTTCTTTGAACCATCCAATCTCGAGAGGGTACATTCACATCAAGAGCAACAACCCC CTCGATGATCCTGAAATTGACGCCAACTACTTTGGTCACAACTTTGATCTCAAAGTTCTTTTGGAACACGTCAAG TACATTCGCTCTCTGGAAGATACCGAACCTTTCAAGTCGCACACCATCAAGGAGGTTGTTCCCGGTCCCGAATGC GCCAGCGACGCTGATATCGAGAACCACATCAAGAATTCGCATATTACCACTTTCCACACCGTTGGAAGCGCTTCG ATGTTGCCTCGAGAGGATGGTGGTGTCGTTGACCCCAAGCTCAAGGTCTATGGCACCAAGAACCTCCGCGTTGCT GACCTTTCCATCGTTCCCCTTCACATCGCTGCTCACATGCAAGCCACTGCCTATGTGATCGGAGAGAAAGCTGCT GATTTGATCAAGGCGGATGCGAAG |
| Length | 1827 |
Transcript
| Sequence id | CC1G_08727T0 |
|---|---|
| Sequence |
>CC1G_08727T0 ATGCCTCTCATCGCCAACCCTGAAGAAATTGCCAACAAGACCTTCGACTATGTCGTCGTCGGCGCAGGTACCGCT GGTTTGACCCTTGCCACTCGCCTCACCGAAGATGAGAATGTTAGCGTCCTCGTCCTCGAGGCCGGTATCCGCCAC CACGGAGACCCCAACATCGATGTCCCGGCCCAATACGGTGCTACTTTCATGCAACCCAAGTACGACTGGGCCTTC AAGACTGTCAAGCAAAAGCACTCCAACGACAATGAACACGTCTGGGCTCGTGGCAAAGGCCTTGGTGGAAGCTCA AACATGAACTTCTTCTGCTGGATCAAGCCTCCTGCGGAGGATGTCGATGCTATTGAGAAGCTTGGCAACCCTGGC TGGAACTGGGCCGATTATGAAGCTTACTCCAAGAAATCTGAGACGTTCCACCCTGCAGTCCCCGAGATTGCTGAG AAATACCCTCATACCTACAACGCGAAGTTCCGTGGAACCTCGGGGCCCATTCAAGTGACCGTACCCCTCCATGCC CACACGCTTGACGAGATCTGGCAAAACACACTCGCTAATAAGGGCGTGAGGAAAATCGAGGACCCCTATGGTGGG GATATCACGGGAACCTGGATCGCTGCTAACAACGTCGATCCGAAAACATGGAAACGCTCCTACTCCGCCACTGCC TACTGGGAGCCTAATCAACACCGTCCTAACCTTCACGTGATCACCGAGGCTTATGTTACCCGTATCGTCTGGGCG GATGAGAAGGATAGTGAGGGCAACCTGGTTGCTACTGGGGTCCAGTTCGTCCATGGCAGCACCGAAAGGACCGTT CTGGCGTCCAAGGAAGTCGTCTTGAGCGCTGGTACGGTGAAGACTCCCCAGATCCTCGAATTGTCCGGCGTCGGT AAACCAGAGATCCTCAGCAAGTTTGGTATCGATACCAAGTTGAACCTTCCGGGCGTCGGCGAGAACGTTCAGGAG CACCACTTCATGTGGGTGATCTACGAGTTGGACACTACCAAGGGTGACCATCAAACTCTCGATATGTTCTTCGAA CCTGGCTACGTCCAAGAATCCCTGAAGCTGCATGCCGAAGGCAAAGGTCTCCATCGTACCGGTATCACTTCCTTT GCCTTCTTGCCCTTATCGAGCAGAGACCCGAAGGCCGCGGCTGCCTTGATTGATGAGCTCGAAGCTGACCTCAAG AAGAAGAAGGAGAGCGGAGAGATCTCGCCTGCTCTTGCCAAGCAATATGACATCCAACTGGAGATTCTTCGCAAT GACAAGGTTCCTGACATGGAATTCATTGTGTTCCCTGGTTATTTCATGTGTCCCGCGAGCCAGGGTACTGGTCGA CGATTCATGACCGTCATCTCTTCTTTGAACCATCCAATCTCGAGAGGGTACATTCACATCAAGAGCAACAACCCC CTCGATGATCCTGAAATTGACGCCAACTACTTTGGTCACAACTTTGATCTCAAAGTTCTTTTGGAACACGTCAAG TACATTCGCTCTCTGGAAGATACCGAACCTTTCAAGTCGCACACCATCAAGGAGGTTGTTCCCGGTCCCGAATGC GCCAGCGACGCTGATATCGAGAACCACATCAAGAATTCGCATATTACCACTTTCCACACCGTTGGAAGCGCTTCG ATGTTGCCTCGAGAGGATGGTGGTGTCGTTGACCCCAAGCTCAAGGTCTATGGCACCAAGAACCTCCGCGTTGCT GACCTTTCCATCGTTCCCCTTCACATCGCTGCTCACATGCAAGCCACTGCCTATGTGATCGGAGAGAAAGCTGCT GATTTGATCAAGGCGGATGCGAAGTAA |
| Length | 1827 |
Gene
| Sequence id | CC1G_08727T0 |
|---|---|
| Sequence |
>CC1G_08727T0 ATGCCTCTCATCGCCAACCCTGAAGAAATTGCCAACAAGACCTTCGACTATGTCGTCGTCGGCGCAGGTGTACGT TGTACTTTACACTCTCTGACCTTGGTCTTCCGTAACTCACCTAAAGTGATCGATTAGACCGCTGGTTTGACCCTT GCCACTCGCCTCACCGAAGATGAGAATGTTAGCGTCCTCGTCCTCGAGGCCGGTATCCGCCACCACGGAGACCCC AACATCGATGTCCCGGCCCAATACGGTGCTACTTTCATGCAACCCAAGGTTAGCGCCCTCGATCCCATCACTCGA TGTCCACCCCTTGACGTGTACCATAGTACGACTGGGCCTTCAAGACTGTCAAGCAAAAGCACTCCAACGACAATG AACACGTCTGGGCTCGTGGCAAAGGCCTTGGTAAGTCGTCGTTGATCATCGCCTACTACGATTCTTACTCCTGTG GCAGGTGGAAGCTCAAACATGAACTTCTTCTGCTGGATCAAGCCTCCTGCGGAGGATGTCGATGCTATTGAGAAG CTTGGCAACCCTGGCTGGAACTGGGCCGATTATGAAGCTTACTCCAAGAAATCTGAGACGTGGGTTATTCTGGTT CTGAACAACTGAATAGGATCTGGATCTAATGTTTGCATGCCAGGTTCCACCCTGCAGTCCCCGAGATTGCTGAGA AATACCCTCATACCTACAACGCGAAGTTCCGTGGAACCTCGGGGCCCATTCAAGTGACCGTACCCCTCCATGCCC ACACGCTTGACGAGATCTGGCAAAACACACTCGCTAATAAGGGCGTGAGGAAAATCGAGGACCCCTATGGTGGGG ATGTATGTGCTCCCATCGCGCTATTCTTAGTGTCCTTGAACTGACAAACTTTCACTCGGTGTAGATCACGGGAAC CTGGATCGCTGCTAACAACGTCGATCCGAAAACATGGAAACGCTCCTACTCCGCCACTGCCTACTGGGAGCCTAA TCAACACCGTCCTAACCTTCACGTATGTGCTCCAACCTTACGTTCGAGACAATCCGCTTAGCCTGCTTGGAATTA AGGTGATCACCGAGGCTTATGTTACCCGTATCGTCTGGGCGGATGAGAAGGATAGTGAGGGCAACCTGGTTGCTA CTGGGGTCCAGTTCGTCCATGGCAGCACCGAAAGGACCGTTCTGGCGTCCAAGGAAGTCGTCTTGAGCGCTGGGT CAGTATTGGATCCGTGATGGTAATGGTGTTCTTTGATCTGATATGCTTTATAGTACGGTGAAGACTCCCCAGATC CTCGAATTGTCCGGCGTCGGTAAACCAGAGATCCTCAGCAAGTTTGGTATCGATACCAAGTTGAACCTTCCGGGC GTCGGCGAGAACGTTCAGGAGCACCACTTCATGTGGGTGATCTACGAGTTGGACACTACCAAGGGTGACCATCAA ACTCTCGATATGTTCTTCGAACCTGGCTACGTCCAAGAATCCCTGAAGCTGCAGTAAGATTCATAACCTTGTTCG TTGCTTCTCGGTACCTGAGCCTGCCCAACTCTTTATAGTGCCGAAGGCAAAGGTCTCCATCGTACCGGTATCACT TCCTTTGCCTTCTTGCCCTTATCGAGCAGAGACCCGAAGGCCGCGGCTGCCTTGATTGATGAGCTCGAAGCTGAC CTCAAGAAGAAGAAGGAGAGCGGAGAGATCTCGCCTGCTCTTGCCAAGCAATATGACATCCAACTGGAGATTCTT CGCAATGACAAGGTTCCTGACATGGAATTCATTGTGTTCCCTGGTTATTTCATGTGTCCCGGTATGTTGTCTCCG TCGCTATCTGGTGGATCATCGTTCCCTTACGGTTTCGATAGCGAGCCAGGGTACTGGTCGACGATTCATGACCGT CATCTCTTCTTTGAACCATCCAATCTCGAGAGGGTACATTGTGAGTCTTTGTCGGTTTCCTATACCAGTGATGTT CAGAGTTTCTAATTCGAAACAATAGCACATCAAGAGCAACAACCCCCTCGATGATCCTGAAATTGACGCCAACTA CTTTGGTCACAACTTTGGTGCGTTCTCATCCATTTGATGTTGCATAGATCTATAGCTTGTACTTATCACGTCTCT GTCTACGCTCTGGCAGATCTCAAAGTTCTTTTGGAACACGTCAAGTACATTCGCTCTCTGGAAGATACCGAACCT TTCAAGTCGCACACCATCAAGGAGGTTGTTCCCGGTCCCGAATGCGCCAGCGACGCTGATATCGAGAGTACGTCA TTCTTTTCTATGCATTCCTGGTGTGTCTGGTAATTGATTCATTGCCTGGGTTCTAGACCACATCAAGAATTCGCA TATTACCACTTTCCGTAAGTCCTGTCTCATTCATTCCCCTCGTGTTGTCTATGAACCCTACTAATCGTGTTGTTT CCTTGGCGCAGACACCGTTGGAAGCGCTTCGATGTTGCCTCGAGAGGATGGTGGTGTCGTTGACCCCAAGCTCAA GGTCTATGGCACCAAGAACCTCCGCGTTGCTGACCTTTCCATCGTTCCCCTTCACATCGCTGCTCACATGCAAGG TCAGTACTTCATACTGGGCGGTATGTCATTACCTCATTGCTAACCAACGTTCCTTTCGCGCTCCAGCCACTGCCT ATGTGATCGGAGAGAAAGGTATGGCAGCAGCTGTGTGCATGCGTTGTTTCCTGTTCGCTGACGAGAACTTCTTTC TACTAGCTGCTGATTTGATCAAGGCGGATGCGAAGTAA |
| Length | 2738 |