CC1G_09078
Coprinopsis cinerea Okoyama 7

General data

Systematic name CC1G_09078 Strain Coprinopsis cinerea A43mutB43mut pab1-1 #326
Standard name - Synonyms
Uniprot id A8P319 Functional description Ricin B-type lectin domain-containing protein
Location Chr_4:687896..689218 Strand -
Gene length (nt) 1323 Transcript length (nt) 975
CDS length (nt) 975 Protein length (aa) 324

Reciprocal best hits in model fungi

Strain name Gene / Protein name
No records

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
No records

Expression

Name Summary Attribution Assay type
Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea Plaza et al. 2016 RNA-seq
Sample Mean cpm SD cpm Se of mean
O7 + PBS 9.4262 2.3789 1.3734
O7 + A. avenae 7.0024 1.111 0.6414
O7 + C. elegans 7.9074 3.174 1.8325
O7 + mechanical damage 7.6278 2.3774 1.3726
O7 + E. coli 8.1979 0.9685 0.5591
O7 + B. subtilis 9.109 0.9671 0.5583

General data

Systematic name -
Protein id 7769
Description Ricin B-type lectin domain-containing protein

Annotation summary

0 100 200 300 324

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd00161 RICIN IPR000772 184 317
Pfam PF00652 Ricin-type beta-trefoil lectin domain IPR000772 196 316

SignalP

Prediction Start End Score
SP(Sec/SPI) 1 19 0.9748

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR000772 Ricin B, lectin domain
IPR035992 Ricin B-like lectins

GO

Go id Term Ontology
No records

KEGG

KEGG Orthology
No records

EggNOG

COG category Description
No records

CAZy

Class Family Subfamily
CBM CBM13

Transcription factor

Group
No records

Conservation of CC1G_09078 across fungi.

Arrow shows the origin of gene family containing CC1G_09078.

Protein

Sequence id 7769
Sequence >7769
MRFLLKCLPTFALLGGALTQNTFSARIRNNCGNTMRLFIDGVDTGPLLPGGDHFANLGLDTVIYNTLNGGNPDGS
ATTRVFFWGERFYYYIVKDAGVSNVGVSISVPEHPKSVDGLCTTITCEPATCSSSEAYSEKQAFTENAIPVSSSP
ALPLRSCPFGGARYVVEWCPNGTMPPGWEQNGQEIQLVVPGDRIWCVDVRAAAFTPGTPVQLYRCNGTPAQKWLV
PSPATTPGEVRLFGTDLCLDAGSNPHNGGLLTIQQCDGRPSQVWVYDDTNGRYTFSTIGGQCMDDTNGLKEDWVQ
LQTWGCGPPENPNQKWLASVAIAP
Length 324

Coding

Sequence id CC1G_09078T0
Sequence >CC1G_09078T0
ATGAGGTTCCTTTTAAAATGCCTTCCTACGTTCGCGCTACTGGGGGGTGCCCTGACGCAGAATACCTTCAGCGCG
AGGATCAGGAACAACTGCGGGAATACGATGCGCTTGTTCATCGACGGTGTCGATACTGGCCCTCTCCTCCCAGGC
GGCGACCATTTCGCGAACTTGGGTCTCGACACTGTGATCTACAATACCCTCAACGGGGGGAACCCCGACGGGAGT
GCTACTACTAGGGTGTTCTTCTGGGGCGAGCGGTTCTATTACTACATCGTCAAAGACGCCGGAGTGAGCAACGTG
GGTGTGAGTATCAGTGTACCTGAGCACCCCAAGTCTGTCGATGGGCTATGCACCACTATTACGTGCGAGCCAGCC
ACCTGCAGCAGCTCTGAGGCGTACTCAGAAAAGCAAGCATTTACAGAGAACGCGATCCCTGTTTCATCCTCTCCC
GCTCTGCCTTTGCGATCATGCCCATTCGGAGGGGCGAGATACGTCGTTGAATGGTGCCCGAATGGAACTATGCCG
CCTGGTTGGGAACAGAATGGTCAAGAAATCCAGCTCGTTGTGCCAGGAGACCGGATTTGGTGTGTTGACGTTCGA
GCTGCCGCATTTACTCCTGGAACGCCGGTCCAGCTCTATCGATGCAACGGAACGCCAGCGCAGAAATGGCTAGTC
CCTTCTCCAGCCACTACTCCGGGTGAAGTGCGCCTTTTCGGGACAGACCTTTGTCTCGATGCTGGAAGTAACCCA
CACAATGGCGGTCTACTGACCATTCAGCAATGTGACGGACGCCCCTCCCAGGTCTGGGTCTACGACGATACAAAT
GGCCGTTACACATTCTCAACCATTGGAGGGCAATGCATGGATGATACCAATGGGCTCAAGGAGGATTGGGTACAG
TTACAGACCTGGGGATGCGGTCCTCCCGAGAATCCTAATCAGAAATGGTTGGCCAGCGTGGCGATCGCTCCT
Length 975

Transcript

Sequence id CC1G_09078T0
Sequence >CC1G_09078T0
ATGAGGTTCCTTTTAAAATGCCTTCCTACGTTCGCGCTACTGGGGGGTGCCCTGACGCAGAATACCTTCAGCGCG
AGGATCAGGAACAACTGCGGGAATACGATGCGCTTGTTCATCGACGGTGTCGATACTGGCCCTCTCCTCCCAGGC
GGCGACCATTTCGCGAACTTGGGTCTCGACACTGTGATCTACAATACCCTCAACGGGGGGAACCCCGACGGGAGT
GCTACTACTAGGGTGTTCTTCTGGGGCGAGCGGTTCTATTACTACATCGTCAAAGACGCCGGAGTGAGCAACGTG
GGTGTGAGTATCAGTGTACCTGAGCACCCCAAGTCTGTCGATGGGCTATGCACCACTATTACGTGCGAGCCAGCC
ACCTGCAGCAGCTCTGAGGCGTACTCAGAAAAGCAAGCATTTACAGAGAACGCGATCCCTGTTTCATCCTCTCCC
GCTCTGCCTTTGCGATCATGCCCATTCGGAGGGGCGAGATACGTCGTTGAATGGTGCCCGAATGGAACTATGCCG
CCTGGTTGGGAACAGAATGGTCAAGAAATCCAGCTCGTTGTGCCAGGAGACCGGATTTGGTGTGTTGACGTTCGA
GCTGCCGCATTTACTCCTGGAACGCCGGTCCAGCTCTATCGATGCAACGGAACGCCAGCGCAGAAATGGCTAGTC
CCTTCTCCAGCCACTACTCCGGGTGAAGTGCGCCTTTTCGGGACAGACCTTTGTCTCGATGCTGGAAGTAACCCA
CACAATGGCGGTCTACTGACCATTCAGCAATGTGACGGACGCCCCTCCCAGGTCTGGGTCTACGACGATACAAAT
GGCCGTTACACATTCTCAACCATTGGAGGGCAATGCATGGATGATACCAATGGGCTCAAGGAGGATTGGGTACAG
TTACAGACCTGGGGATGCGGTCCTCCCGAGAATCCTAATCAGAAATGGTTGGCCAGCGTGGCGATCGCTCCTTGA
Length 975

Gene

Sequence id CC1G_09078T0
Sequence >CC1G_09078T0
ATGAGGTTCCTTTTAAAATGCCTTCCTACGTTCGCGCTACTGGGGGGTGCCCTGACGCAGAATACCTTCAGCGCG
AGGATCAGGAACAACTGCGGGAATACGATGCGCTTGTTCATCGACGGTGTCGATACTGGCCCTCTCCTCCCAGGC
GGCGACCATTTCGCGAACTTGGGTCTCGACACTGTGATCTACAATACCCTCAACGGGGGGAACCCCGACGGGAGT
GCTACTACTAGGGTGTTCTTCTGGGGCGAGGTAAGTGTGTCTATACCGTCGTACCAACATAGTTTCTGATTAGCC
CTTTTACCACAAGCGGTTCTATTACTACATCGTCAAAGACGCCGGAGTGAGCAACGTGGGTGTGAGTATCAGTGT
ACCTGAGCACCCCAAGTCTGTAAGTACCCTCGTCGAGTTCCAATGTACGGATATTCCTAACTGGTTGAGAACAGG
TCGATGGGCTATGCACCACTATTACGTGCGAGCCAGCCACCTGCAGCAGCTCTGAGGCGTACTCAGAAAAGCAAG
CATTTACAGAGAACGCGATCCCTGTTTCATCCTCTCCCGCTCTGCCTTTGCGATCATGCCCATTCGGAGGGGCGA
GATACGTCGTTGAGTAAGCCCTTTATTATTTGTGGTGTTGGATAAAGACTGAGGCAATGCTAGATGGTGCCCGAA
TGGAACTATGCCGCCTGGTTGGGAACAGAATGGTCAAGAAATCCAGCTCGTTGTGCCAGGAGACCGGATTTGGTG
TGTTGACGTTCGAGCTGCCGCATTTACTCCTGGAACGCCGGTCCAGCTGTGAGTCACTCGCTCATTGTCGTCAGT
AATTCCTCTGAACGCGTGCTAACGTGAGTACCTAGCTATCGATGCAACGGAACGCCAGCGCAGAAATGGCTAGTC
CCTTCTCCAGCCACTACTCCGGGTGAAGTGCGCCTTTTCGGGACAGACCTTTGTCTCGATGCTGGAAGTAGTACG
TCAAGCTCAGACCGAGCCCCGCCGATGGAAGCCTAACGAAAAATACTTTAGACCCACACAATGGCGGTCTACTGA
CCATTCAGCAATGTGACGGACGCCCCTCCCAGGTCTGGGTCTACGACGATACAAATGGCCGTTACACATTCTCAA
CCATTGGAGGTCAGTCCTTTATTTTTTCCTCGAGCGATATGACAAGAATCTCACGAAAGTCACCCTACGGTGCCA
GGGCAATGCATGGATGATACCAATGGGCTCAAGGAGGATTGGGTACAGTTACAGACCTGGGGATGCGGTCCTCCC
GAGAATCCTAATCAGAAATGGTTGGCCAGCGTGGCGATCGCTCCTTGA
Length 1323