CC1G_09340
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_09340 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | A8N5N5 | Functional description | CEL4b mannanase |
| Location | Chr_3:1290973..1292648 | Strand | + |
| Gene length (nt) | 1676 | Transcript length (nt) | 1164 |
| CDS length (nt) | 1164 | Protein length (aa) | 387 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits | |
|---|---|---|---|---|---|
| No records | |||||
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 7990 |
| Description | CEL4b mannanase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00150 | Cellulase (glycosyl hydrolase family 5) | IPR001547 | 41 | 296 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| SP(Sec/SPI) | 1 | 19 | 0.9989 |
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| IPR045053 | Mannan endo-1,4-beta-mannosidase-like |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR001547 | Glycoside hydrolase, family 5 |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
| GO:0071704 | organic substance metabolic process | BP |
KEGG
| KEGG Orthology |
|---|
| K19355 |
EggNOG
| COG category | Description |
|---|---|
| G | Belongs to the glycosyl hydrolase 5 (cellulase A) family |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| GH | GH5 | GH5_7 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_09340 across fungi.
Arrow shows the origin of gene family containing CC1G_09340.
Protein
| Sequence id | 7990 |
|---|---|
| Sequence |
>7990 MKFLLALLSAICLFQMASAAAISRRAPGFVQTDGTYFSLDGYKYTVVGANAYWISQAGLSDADMDKSFADIASMG ATTVRVWGFNEMAEEHIAENGIYYQLWRGNKAVVNYSASGLGYFDRVIASARKHNLRLIVVLTSNYNLDWVVGGA GTYMDQVLGPNRRQTNDAFFTHPEIKDIFKNYVSAIVSRYKDEKTIMSWELGHQLKCAVSWNPRNPQCNPEIITE WIKEMSSHIKSIDSNHLVAVGDEGFFNRPNSNGRYVYTGRDGMDFEANSALNTIDYATFAYRPASYEMPTHSKEP LEWIDAHGKSQERLQKPVLLVDLGSEIRPHWLDQIVESGIAGTLYWQAGTEGIKLNMPYWFRGDYISLSSDIAKD IKKHFEALKRRP |
| Length | 387 |
Coding
| Sequence id | CC1G_09340T0 |
|---|---|
| Sequence |
>CC1G_09340T0 ATGAAGTTCCTATTAGCTCTCCTCTCGGCGATCTGCCTCTTCCAAATGGCTTCTGCCGCTGCTATCTCTCGTCGA GCACCAGGATTCGTCCAGACTGACGGGACGTATTTCTCGCTCGATGGCTATAAATACACCGTTGTGGGAGCCAAT GCGTATTGGATTAGCCAGGCGGGTCTCAGTGACGCCGACATGGACAAGTCCTTCGCAGATATTGCCAGTATGGGA GCAACCACCGTTCGCGTCTGGGGATTCAACGAGATGGCTGAAGAGCACATCGCTGAAAATGGCATTTACTATCAA CTCTGGCGCGGAAACAAGGCTGTAGTGAACTACAGCGCCAGCGGCTTGGGATACTTCGACCGTGTCATTGCCAGT GCTCGCAAGCACAACCTCCGTCTGATCGTTGTCCTTACTAGCAACTATAACCTAGATTGGGTTGTCGGCGGTGCT GGTACCTACATGGATCAGGTCCTTGGCCCGAACCGCCGCCAGACCAACGATGCATTCTTCACTCACCCCGAGATC AAGGATATCTTCAAGAACTATGTTAGTGCCATCGTAAGCAGGTATAAGGACGAGAAGACCATCATGTCCTGGGAA CTCGGGCACCAGTTGAAGTGCGCGGTGTCTTGGAACCCCAGGAATCCCCAATGCAACCCAGAAATCATTACCGAA TGGATCAAGGAGATGTCCTCTCACATCAAGTCCATCGATTCCAACCACCTCGTGGCTGTTGGAGACGAAGGCTTC TTCAACAGGCCTAACAGCAACGGCCGCTACGTCTACACTGGCAGGGATGGAATGGATTTCGAGGCTAACTCTGCT CTCAACACCATCGATTACGCTACTTTCGCATACCGCCCCGCCTCTTATGAGATGCCGACTCATTCCAAGGAGCCA TTGGAATGGATCGATGCTCACGGAAAGTCTCAGGAGCGCCTCCAGAAGCCCGTCCTCTTGGTCGATCTGGGAAGT GAAATCCGCCCTCACTGGCTTGACCAAATCGTCGAGTCCGGAATTGCCGGAACACTCTACTGGCAAGCCGGAACC GAAGGCATTAAGCTCAACATGCCATACTGGTTCAGGGGCGACTACATTAGCCTCTCCTCTGACATCGCCAAGGAT ATCAAGAAGCACTTCGAGGCTCTCAAGAGGCGACCA |
| Length | 1164 |
Transcript
| Sequence id | CC1G_09340T0 |
|---|---|
| Sequence |
>CC1G_09340T0 ATGAAGTTCCTATTAGCTCTCCTCTCGGCGATCTGCCTCTTCCAAATGGCTTCTGCCGCTGCTATCTCTCGTCGA GCACCAGGATTCGTCCAGACTGACGGGACGTATTTCTCGCTCGATGGCTATAAATACACCGTTGTGGGAGCCAAT GCGTATTGGATTAGCCAGGCGGGTCTCAGTGACGCCGACATGGACAAGTCCTTCGCAGATATTGCCAGTATGGGA GCAACCACCGTTCGCGTCTGGGGATTCAACGAGATGGCTGAAGAGCACATCGCTGAAAATGGCATTTACTATCAA CTCTGGCGCGGAAACAAGGCTGTAGTGAACTACAGCGCCAGCGGCTTGGGATACTTCGACCGTGTCATTGCCAGT GCTCGCAAGCACAACCTCCGTCTGATCGTTGTCCTTACTAGCAACTATAACCTAGATTGGGTTGTCGGCGGTGCT GGTACCTACATGGATCAGGTCCTTGGCCCGAACCGCCGCCAGACCAACGATGCATTCTTCACTCACCCCGAGATC AAGGATATCTTCAAGAACTATGTTAGTGCCATCGTAAGCAGGTATAAGGACGAGAAGACCATCATGTCCTGGGAA CTCGGGCACCAGTTGAAGTGCGCGGTGTCTTGGAACCCCAGGAATCCCCAATGCAACCCAGAAATCATTACCGAA TGGATCAAGGAGATGTCCTCTCACATCAAGTCCATCGATTCCAACCACCTCGTGGCTGTTGGAGACGAAGGCTTC TTCAACAGGCCTAACAGCAACGGCCGCTACGTCTACACTGGCAGGGATGGAATGGATTTCGAGGCTAACTCTGCT CTCAACACCATCGATTACGCTACTTTCGCATACCGCCCCGCCTCTTATGAGATGCCGACTCATTCCAAGGAGCCA TTGGAATGGATCGATGCTCACGGAAAGTCTCAGGAGCGCCTCCAGAAGCCCGTCCTCTTGGTCGATCTGGGAAGT GAAATCCGCCCTCACTGGCTTGACCAAATCGTCGAGTCCGGAATTGCCGGAACACTCTACTGGCAAGCCGGAACC GAAGGCATTAAGCTCAACATGCCATACTGGTTCAGGGGCGACTACATTAGCCTCTCCTCTGACATCGCCAAGGAT ATCAAGAAGCACTTCGAGGCTCTCAAGAGGCGACCATGA |
| Length | 1164 |
Gene
| Sequence id | CC1G_09340T0 |
|---|---|
| Sequence |
>CC1G_09340T0 ATGAAGTTCCTATTAGCTCTCCTCTCGGCGATCTGCCTCTTCCAAATGGCTTCTGCCGCTGCTATCTCTCGTCGA GCACCAGGATTCGTCCAGACTGACGGGACGTATTTCTCGCTCGATGGCTATAAATACACCGTTGTGGGGTACGTG GACTGCGCCCCGCCGACGTTCTCTGTTGCTAACGCCGCCTTGTAACAGAGCCAATGCGTATTGGATTAGCCAGGC GGGTCTCAGTGACGCCGACATGGACAAGTCCTTCGCAGATATTGCCAGTATGGGAGCAACCACCGTTCGCGTCTG GTCGGTGGCCCGGAAGTCTCTTTGGCTGCATGTTGCATACTCACATCATTGACTTGCTTCAGGGGATTCAACGAG ATGGCTGAAGAGCACATCGCTGAAAATGGCATTTACTATCAACTCTGGCGCGGAAACAAGGCTGTAGTGAACTAC AGCGCCAGCGGCTTGGGATACTTCGGTAAGTGCTCTCTCTACGACTGCCTTGAATTGCAGGCTAATGGGCATTTT AGACCGTGTCATTGCCAGTGCTCGCAAGCACAACCTCCGTCTGATCGTTGTCCTGTAAGCTTACTCACTTTACGA CACTTGCTGCGATTCTGACGCGTAGGGGTGGACAGTACTAGCAACTATAACCTAGATTGGGTTGTCGGCGGTGCT GGTACCTACATGGATCAGGTCCTTGGCCCGAACCGCCGCCAGACCAACGATGCATTCTTCACTCACCCCGAGATC AAGGTCGGATTCACATGTCTCACGAAGTGGATTGATATTGACGGTTATACTTATAGGATATCTTCAAGAACTATG TTAGTGCCATCGTAAGCAGGTATAAGGACGAGAAGACCATCATGTCCTGGGAACTCGGGCACCAGTTGAAGTGCG CGGTGTCTTGGAAGTAAGTCGAGCTGATAGCCATCTTATGTAGCTCGAGAACCGACATTAATCCACTCTGGGACT GTCAGCCCCAGGAATCCCCAATGCAACCCAGAAATCATTACCGAATGGATCAAGGAGATGTCCTCTCACATCAAG TCCATCGATTCCAACCACCTCGTGGCTGTTGGAGACGAAGGCTTCTTCAACAGGCCTAACAGCAACGGCCGCTAC GTCTACACGTAAGTTCGAGTCGTAGAGGGTAAATCTAGAACTGAGGACTGATCGGTGGACCTGCAGTGGCAGGGA TGGAATGGATTTCGAGGCTAACTCTGCTCTCAACACCATCGATTACGCTACTTTCGCAGTGAGTGTATCCTCGAA ATGCTAGACCCGGTCCTTGCTGACGCCATGAATAGTACCGCCCCGCCTCTTATGAGATGCCGACTCATTCCAAGG AGCCATTGGAATGGATCGATGCTCACGGAAAGTCTCAGGAGCGCCTCCAGAAGCCCGTCCTCTTGGTCGATCTGG GAAGTGAAATCCGCCCTCACTGGCTTGACCAAATCGTCGAGTCCGGAATTGCCGGAACACTCTACTGGCAAGCCG GAACCGAAGGCATTAAGCTGTACGTTTTATCCCTCTATCACCAGGCTCCAACGAGAGACTAACGAAGTTTCTCCA GCAACATGCCATACTGGTTCAGGGGCGACTACATTAGCCTCTCCTCTGACATCGCCAAGGATATCAAGAAGCACT TCGAGGCTCTCAAGAGGCGACCATGA |
| Length | 1676 |