CC1G_11193
Coprinopsis cinerea Okoyama 7

General data

Systematic name CC1G_11193 Strain Coprinopsis cinerea A43mutB43mut pab1-1 #326
Standard name - Synonyms
Uniprot id A8NJS2 Functional description Uncharacterized protein
Location Chr_10:1432147..1434449 Strand +
Gene length (nt) 2303 Transcript length (nt) 1338
CDS length (nt) 1338 Protein length (aa) 445

Reciprocal best hits in model fungi

Strain name Gene / Protein name
No records

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7262631 71.7 6.351E-216 668
Pleurotus eryngii ATCC 90797 Pleery1_1437617 66.9 9.532E-202 627
Hypsizygus marmoreus strain 51987-8 Hypma_RDB19692 66.2 2.944E-199 620
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_121792 65.2 5.836E-195 607
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_131529 64.8 3.267E-193 602
Auricularia subglabra Aurde3_1_1314644 61.9 4.323E-180 565
Pleurotus ostreatus PC15 PleosPC15_2_1048073 61.8 2.287E-180 565
Pleurotus ostreatus PC9 PleosPC9_1_59334 61.8 2.239E-180 565
Flammulina velutipes Flave_chr04AA00471 57.7 1.815E-165 522
Lentinula edodes W1-26 v1.0 Lentinedodes1_10646 36.9 2.684E-89 301
Ganoderma sp. 10597 SS1 v1.0 Gansp1_38626 38.4 4.464E-63 224
Grifola frondosa Grifr_OBZ68558 44.2 1.299E-52 193
Lentinula edodes B17 Lened_B_1_1_11129 47.7 5.898E-27 115
Lentinula edodes NBRC 111202 Lenedo1_731020 24.3 2.332E-17 85

Expression

Name Summary Attribution Assay type
Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea Plaza et al. 2016 RNA-seq
Sample Mean cpm SD cpm Se of mean
O7 + PBS 10.0026 4.914 2.8371
O7 + A. avenae 10.3207 2.2124 1.2773
O7 + C. elegans 7.9902 1.5923 0.9193
O7 + mechanical damage 6.8584 1.7609 1.0166
O7 + E. coli 8.2635 3.2807 1.8941
O7 + B. subtilis 28.4716 8.061 4.654

General data

Systematic name -
Protein id 9511
Description Uncharacterized protein

Annotation summary

0 100 200 300 400 445

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
Pfam PF00295 Glycosyl hydrolases family 28 IPR000743 141 410

SignalP

Prediction Start End Score
SP(Sec/SPI) 1 38 0.7815

Transmembrane domains

Domain n Start End Length
1 17 36 19

InterPro

Accession Description
IPR012334 Pectin lyase fold
IPR000743 Glycoside hydrolase, family 28
IPR011050 Pectin lyase fold/virulence factor

GO

Go id Term Ontology
GO:0004650 polygalacturonase activity MF
GO:0005975 carbohydrate metabolic process BP

KEGG

KEGG Orthology
K01213

EggNOG

COG category Description
G Belongs to the glycosyl hydrolase 28 family

CAZy

Class Family Subfamily
GH GH28

Transcription factor

Group
No records

Conservation of CC1G_11193 across fungi.

Arrow shows the origin of gene family containing CC1G_11193.

Protein

Sequence id 9511
Sequence >9511
MDCSHAYCEGGMGKTSLMLRFIASSLWLCLLFAALGRAQDLDADEVLEAGAPPRRCIIPYSRNPNQDDSQSILRT
VNRCSTNSIIEFRPANYSVYTPISLLNLRNVKILLNGNIVLPSNITKVQVEINNTLNQPALYATPWIYIQGTNVE
LVGSSDFKYGRFYSFGQQWWDLGIRTLRPHLATFNVTNGLLKNLKIIKPIAWGWSIPGQNIRIENHFVDAKPENA
TRDDTVSFPFNTDGFNLSGKNITIDGYYGHNGDDCVSVINGARDIVAKNGYCGFSSHGLSIGSLGRDGAEHTVKN
VLFKNWTMDGAVYGARFKSWTGGRGYGENIAWEDITLVNVSTGIFITQNYYDQDKGPRPPNPGNTSTKVINISFR
NFKGSLGTNWTVILDLYPDTATNVTLENIDIHPFNQPGEVANVMCDPTALSAREQSRLGFKCTNGPFEAT
Length 445

Coding

Sequence id CC1G_11193T0
Sequence >CC1G_11193T0
ATGGACTGTAGTCACGCGTACTGCGAAGGAGGCATGGGGAAGACGAGCTTGATGTTGAGGTTTATTGCTTCGTCG
CTTTGGCTCTGCCTCCTCTTTGCTGCTCTTGGGCGTGCCCAGGATCTCGACGCCGACGAGGTACTGGAGGCGGGG
GCACCCCCTCGTAGATGCATTATTCCGTACTCCAGGAATCCGAACCAGGACGACTCGCAGTCTATCCTGCGCACT
GTGAATAGGTGCTCGACCAACTCGATCATCGAGTTTAGGCCGGCCAATTATAGTGTTTACACTCCCATCTCGCTT
TTGAATCTTCGAAACGTCAAGATTCTTTTGAATGGGAATATTGTCCTCCCTTCGAATATAACGAAGGTGCAAGTC
GAGATTAACAATACGCTGAACCAGCCTGCTCTTTATGCCACGCCCTGGATCTACATCCAAGGGACGAACGTCGAG
CTCGTTGGATCAAGCGATTTCAAGTACGGGCGCTTCTACAGTTTCGGGCAGCAATGGTGGGACTTGGGTATCCGG
ACCCTCCGACCGCACCTTGCAACATTTAACGTCACGAACGGCCTTTTGAAGAACCTCAAGATTATCAAACCCATT
GCTTGGGGATGGAGTATCCCCGGCCAGAACATCAGGATTGAAAACCATTTCGTGGATGCGAAGCCCGAGAATGCG
ACGCGGGATGATACAGTCAGCTTCCCTTTCAATACCGATGGGTTCAACTTGTCTGGCAAGAATATCACCATTGAC
GGGTACTACGGACACAATGGCGACGATTGCGTTTCTGTCATCAACGGAGCTCGAGACATTGTCGCGAAGAACGGG
TACTGTGGATTTTCCTCCCATGGACTCTCCATCGGCTCTTTGGGGCGTGATGGGGCGGAGCATACAGTTAAAAAT
GTGTTATTCAAGAATTGGACTATGGATGGAGCTGTGTATGGCGCTCGGTTCAAGAGTTGGACTGGGGGAAGGGGA
TATGGAGAGAACATTGCTTGGGAGGATATCACGCTCGTCAACGTATCCACCGGTATATTCATCACTCAGAACTAC
TATGACCAAGACAAAGGACCGCGCCCACCCAATCCAGGCAACACAAGCACCAAAGTGATCAATATATCCTTCAGG
AACTTTAAAGGAAGTCTAGGTACCAATTGGACTGTTATTTTGGATTTGTATCCTGATACTGCGACGAATGTCACG
TTGGAGAACATCGATATACACCCATTCAACCAGCCTGGAGAGGTGGCGAATGTGATGTGCGACCCGACGGCTCTA
AGCGCGAGGGAGCAGAGTAGGCTGGGATTCAAGTGCACCAACGGACCTTTCGAGGCGACG
Length 1338

Transcript

Sequence id CC1G_11193T0
Sequence >CC1G_11193T0
ATGGACTGTAGTCACGCGTACTGCGAAGGAGGCATGGGGAAGACGAGCTTGATGTTGAGGTTTATTGCTTCGTCG
CTTTGGCTCTGCCTCCTCTTTGCTGCTCTTGGGCGTGCCCAGGATCTCGACGCCGACGAGGTACTGGAGGCGGGG
GCACCCCCTCGTAGATGCATTATTCCGTACTCCAGGAATCCGAACCAGGACGACTCGCAGTCTATCCTGCGCACT
GTGAATAGGTGCTCGACCAACTCGATCATCGAGTTTAGGCCGGCCAATTATAGTGTTTACACTCCCATCTCGCTT
TTGAATCTTCGAAACGTCAAGATTCTTTTGAATGGGAATATTGTCCTCCCTTCGAATATAACGAAGGTGCAAGTC
GAGATTAACAATACGCTGAACCAGCCTGCTCTTTATGCCACGCCCTGGATCTACATCCAAGGGACGAACGTCGAG
CTCGTTGGATCAAGCGATTTCAAGTACGGGCGCTTCTACAGTTTCGGGCAGCAATGGTGGGACTTGGGTATCCGG
ACCCTCCGACCGCACCTTGCAACATTTAACGTCACGAACGGCCTTTTGAAGAACCTCAAGATTATCAAACCCATT
GCTTGGGGATGGAGTATCCCCGGCCAGAACATCAGGATTGAAAACCATTTCGTGGATGCGAAGCCCGAGAATGCG
ACGCGGGATGATACAGTCAGCTTCCCTTTCAATACCGATGGGTTCAACTTGTCTGGCAAGAATATCACCATTGAC
GGGTACTACGGACACAATGGCGACGATTGCGTTTCTGTCATCAACGGAGCTCGAGACATTGTCGCGAAGAACGGG
TACTGTGGATTTTCCTCCCATGGACTCTCCATCGGCTCTTTGGGGCGTGATGGGGCGGAGCATACAGTTAAAAAT
GTGTTATTCAAGAATTGGACTATGGATGGAGCTGTGTATGGCGCTCGGTTCAAGAGTTGGACTGGGGGAAGGGGA
TATGGAGAGAACATTGCTTGGGAGGATATCACGCTCGTCAACGTATCCACCGGTATATTCATCACTCAGAACTAC
TATGACCAAGACAAAGGACCGCGCCCACCCAATCCAGGCAACACAAGCACCAAAGTGATCAATATATCCTTCAGG
AACTTTAAAGGAAGTCTAGGTACCAATTGGACTGTTATTTTGGATTTGTATCCTGATACTGCGACGAATGTCACG
TTGGAGAACATCGATATACACCCATTCAACCAGCCTGGAGAGGTGGCGAATGTGATGTGCGACCCGACGGCTCTA
AGCGCGAGGGAGCAGAGTAGGCTGGGATTCAAGTGCACCAACGGACCTTTCGAGGCGACGTAG
Length 1338

Gene

Sequence id CC1G_11193T0
Sequence >CC1G_11193T0
ATGGACTGTAGTCACGCGTACTGCGGTGAGTTAAGGAAGCGTGAATACTGTACGTGACGCTGGGGGATTAGTTCT
CAGGAATGTGCTTCGAAATGGGACGGGTGTATATCTTGTTGGTATTTATATGGGTTGGATGAGAGTGTTTGAAAT
CTGTAGGGGTTGGACTACATTCGACCTCATTCCATCTTTCACCGGCGCTTTGCAGAAGGAGGCATGGGGAAGACG
AGCTTGATGTTGAGGTTTATTGCTTCGTCGCTTTGGCTCTGCCTCCTCTTTGCTGCTCTTGGGCGTGCCCAGGAT
CTCGACGCCGACGAGGTACTGGAGGCGGGGGCACCCCCTCGTAGATGCATTATTCCGTACTCCAGGAATCCGAAC
CAGGACGACTCGCAGTCTATCCTGCGCACTGTGAATAGGTGCTCGACCAACTCGATCATCGAGTTTAGGCCGGCC
AATTATAGTGTTTACACTCCCATCTCGCTTTTGAATCTTCGTAAGTGCTTCATTTAAAGTTTGGGACTGGGTGCG
GCGACTGATGGTATGTACGTTGCATCTGGTGGTTAGGAAACGTCAAGATTCTTTTGAATGGGAATATTGTCCTCC
CTTCGAATATAACGAAGGTGCAAGTCGAGATTAACAATACGCTGAACCAGCCTGCTGTGCGTGTTTGCGACTTTT
TCGAGGTCACCTTTGTGCTGATGGTATAGCTGTAGCTTTATGCCACGCCCTGGATCTACATCCAAGGGACGAACG
TCGAGCTCGTTGGATCAAGCGATTTCAAGTACGGGCGCTTCTACAGTTTCGGGCAGCAATGGTGGGACTTGGGTA
TCCGGGTACGCCTTTCTTCCGTGACTCTACCTCTCCCTCTATCCATTATTGACGCCTGTGAATTAGACCCTCCGA
CCGCACCTTGCAACATTTAACGTCACGAACGGCCTTTTGAAGAACCTCAAGATTATCAAACCCATTGCTTGGGGA
TGGAGTATCCCCGGCCAGAACATCAGGATTGAAAACCATTTCGTGGATGCGAAGCCCGAGAATGCGACGCGGGAT
GATACAGTCGTGAGTCTCCCTCTCTTTTAACGTGTGGCCCCAAAGTATGTGCTCTAATGCATGCGTTTGGTTTTT
TGTAGAGCTTCCCTTTCAATACGTACGTGGATGGTGTTTTTCCAGTGCGAGTGATTGGATGTTTATTGTCGCTAG
CGATGGGTTCAACTTGTCTGGCAAGAATATCACCATTGACGGGTGTGTTTCCTCTTTCCAGCGCCTTAATTCCAG
AGGTTGTCATTTCCTAACCGTCGGATATCAGGTACTACGGACACAATGGCGACGATTGCGTTTCTGTCATCAACG
GAGCTCGAGACATTGTCGCGAAGAACGGGTACTGTGGATTTTCCTCCCATGGACTCTCCATCGGCTCTTTGGGGC
GTGATGGGGCGGAGCATACAGTTAAAAATGTGTTATTCAAGAATTGGACTATGGATGGAGCTGTGTATGGCGCTC
GGGTAAGTTGAACCCTCATTCGTGGTGCGGCCCGTGATGCTGACGCTAATGCTGCACACAGTTCAAGAGTTGGAC
TGGGGGAAGGGGATATGGAGAGAACATTGCTTGGGAGGATATCACGCTCGTCAACGTATCCACCGGTATATTCAT
CACTCAGAAGTGAGTATCGTTCCTAGCATCGCTGGTACCTGAGTGACATCGCTAACCTGTATGAATCCGATCAGC
TACTATGACCAAGTGAGTCACTTTAAATTCCTCAGCACCCCCATTTCTAACGACGTCGCTATAGGACAAAGGACC
GCGCCCACCCAATCCAGGCAACACAAGCACCAAAGTGATCAATATATCCTTCAGGAACTTTAAAGGAAGTCTAGG
TACCAATTGGAGTAAGTCATTCGCCAAATCGGGGTACGGTCTTGGCTTATTGACGGTCCTGTCACCGATCGCGCC
CCTATTTTCGTTTTTGAACCTGCTTTGAAAATGCGAAACTACGTGAAACTATGTTAGCGGACGGATCGTGTATAA
GCACGCCTTGTTGGAATTACGTGGAGGGGCTTGATGAACCTAAAGCTGTTATTTTGGATTTGTATCCTGATACTG
GTGAGTCAGGTTCGGTGGATGCGGGGTGCGGTGGCTGATCGTGTTGTACAGCGACGAATGTCACGTTGGAGAACA
TCGATATACACCCATTCAACCAGCCTGGAGAGGTGGCGAATGTGATGTGCGACCCGACGGCTCTAAGCGCGAGGG
AGCAGAGTAGGCTGGGATTCAAGTGCACCAACGGACCTTTCGAGGCGACGTAG
Length 2303