CC1G_14799
Coprinopsis cinerea Okoyama 7

General data

Systematic name CC1G_14799 Strain Coprinopsis cinerea A43mutB43mut pab1-1 #326
Standard name - Synonyms
Uniprot id D6RNH9 Functional description Uncharacterized protein
Location Chr_7:886479..887329 Strand -
Gene length (nt) 851 Transcript length (nt) 563
CDS length (nt) 462 Protein length (aa) 153

Reciprocal best hits in model fungi

Strain name Gene / Protein name
Aspergillus nidulans exgB

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_118685 61.7 3.746E-209 649
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_205540 61.7 7.976E-209 648
Agrocybe aegerita Agrae_CAA7265173 61.8 1.343E-206 642
Grifola frondosa Grifr_OBZ73724 62.3 2.174E-199 621
Ganoderma sp. 10597 SS1 v1.0 Gansp1_118440 59.2 1.517E-194 607
Pleurotus eryngii ATCC 90797 Pleery1_1590136 59.1 4.79E-191 597
Pleurotus ostreatus PC15 PleosPC15_2_1043147 59.7 9.848E-190 593
Hypsizygus marmoreus strain 51987-8 Hypma_RDB18518 61.7 1.474E-188 590
Pleurotus ostreatus PC9 PleosPC9_1_89806 57.7 5.633E-187 585
Lentinula edodes NBRC 111202 Lenedo1_342137 58.6 1.033E-181 570
Lentinula edodes W1-26 v1.0 Lentinedodes1_7148 57.9 1.325E-178 561
Schizophyllum commune H4-8 Schco3_2620053 57.9 7.446E-178 559
Auricularia subglabra Aurde3_1_1230494 56.9 3.195E-164 520
Lentinula edodes B17 Lened_B_1_1_14229 56.2 6.9E-146 466
Flammulina velutipes Flave_chr06AA00970 55.1 3.434E-80 275

Expression

Name Summary Attribution Assay type
Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea Plaza et al. 2016 RNA-seq
Sample Mean cpm SD cpm Se of mean
O7 + PBS 62.084 46.322 26.744
O7 + A. avenae 37.6164 5.9338 3.4259
O7 + C. elegans 60.4156 44.7789 25.8531
O7 + mechanical damage 60.5351 46.8175 27.0301
O7 + E. coli 16.9368 11.9514 6.9001
O7 + B. subtilis 18.9803 13.0314 7.5237

General data

Systematic name -
Protein id 12350
Description Uncharacterized protein

Annotation summary

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
No records

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR017853 Glycoside hydrolase superfamily

GO

Go id Term Ontology
No records

KEGG

KEGG Orthology
K22277

EggNOG

COG category Description
G Belongs to the glycosyl hydrolase 5 (cellulase A) family

CAZy

Class Family Subfamily
GH GH5 GH5_15

Transcription factor

Group
No records

Conservation of CC1G_14799 across fungi.

Arrow shows the origin of gene family containing CC1G_14799.

Protein

Sequence id 12350
Sequence >12350
MSTSFMDMTWQYNNPSNPADAKIGPQTYDNHLYYSFGGVTDPNEEAYMTHICNLDRIEKAGALRNTPLWFGEWSL
ATQFGASDEFLHKWADAQKLAYSKSAGWIFWNFKIELSSRSGNTARQWSYMEGIRRGYFTKDPSKLNNPRVCDPY
IRK
Length 153

Coding

Sequence id CC1G_14799T0
Sequence >CC1G_14799T0
ATGTCGACCAGCTTCATGGATATGACTTGGCAGTATAACAACCCTTCGAACCCTGCAGATGCGAAGATTGGCCCT
CAGACATACGATAATCATCTGTACTACTCTTTTGGGGGCGTCACTGACCCCAACGAAGAAGCGTACATGACTCAC
ATATGCAACCTCGATCGAATTGAGAAGGCGGGCGCTCTTAGGAACACACCTCTTTGGTTTGGAGAATGGAGTTTA
GCCACCCAATTTGGCGCCTCGGATGAGTTCCTCCACAAATGGGCCGACGCCCAAAAGCTGGCGTATAGCAAGTCC
GCTGGATGGATCTTCTGGAACTTCAAGATTGAGCTCTCATCACGATCTGGTAATACTGCGCGGCAGTGGTCCTAT
ATGGAAGGCATCCGTCGGGGATATTTCACGAAAGACCCATCTAAACTGAACAATCCCAGGGTCTGCGATCCTTAT
ATCAGGAAG
Length 462

Transcript

Sequence id CC1G_14799T0
Sequence >CC1G_14799T0
ATGTCGACCAGCTTCATGGATATGACTTGGCAGTATAACAACCCTTCGAACCCTGCAGATGCGAAGATTGGCCCT
CAGACATACGATAATCATCTGTACTACTCTTTTGGGGGCGTCACTGACCCCAACGAAGAAGCGTACATGACTCAC
ATATGCAACCTCGATCGAATTGAGAAGGCGGGCGCTCTTAGGAACACACCTCTTTGGTTTGGAGAATGGAGTTTA
GCCACCCAATTTGGCGCCTCGGATGAGTTCCTCCACAAATGGGCCGACGCCCAAAAGCTGGCGTATAGCAAGTCC
GCTGGATGGATCTTCTGGAACTTCAAGATTGAGCTCTCATCACGATCTGGTAATACTGCGCGGCAGTGGTCCTAT
ATGGAAGGCATCCGTCGGGGATATTTCACGAAAGACCCATCTAAACTGAACAATCCCAGGGTCTGCGATCCTTAT
ATCAGGAAGTAATGGTTTGCGGCACCGATTGAACCACGGAGAGATAGCAATAATTCTCAGCTACAATGATTATCG
AATTTAATACAGCTATGGGCGAGGGTGAATGTCCAGAG
Length 563

Gene

Sequence id CC1G_14799T0
Sequence >CC1G_14799T0
ATGTCGACCAGCTTCATGGATATGACTTGGCAGTATAACAACCCTTCGAACCCTGCAGATGCGAAGATTGGCCCT
CAGACATACGATAATCATCTGTACTACTCTTTTGGGGTGGGTGTCTTGACGACTGATTTGAACGTATCGGGCGAA
TAACGCGCCACACTTCACAGGGCGTCACTGACCCCAACGAAGAAGCGTACATGACTCACATATGCAGTATGTTTT
TCTATCTTTTTATCATGGGTGTACCATGGCTAATGGCTACCTTGACCAGACCTCGATCGAATTGAGAAGGCGGGC
GCTCTTAGGAACACACCTCTTTGGTTTGGAGGTGAATTCCGCCCGAAATGACGGATTAATGCAATTGTCTAACGG
ACCTTGTCCCAGAATGGAGTTTAGCCACCCAATTTGGCGCCTCGGATGAGTTCCTCCACAAATGGGCCGACGCCC
AAAAGCTGGCGTATAGCAAGTCCGCTGGATGGATCGTAAGTTGTTTGGTTTGAACTTTGCAGACTGTTGACGTAT
TGTCCATCCAGTTCTGGAACTTCAAGATTGAGCTCTCATCACGATCTGGTAATACTGCGCGGCAGTGGTGAGTGC
TTGTACCCTCTCAGGGTTATCTTAAGTTCCTGATGTACTTTGGCGCGCTTCGCTAGGTCCTATATGGAAGGCATC
CGTCGGGGATATTTCACGAAAGACCCATCTAAACTGAACAATCCCAGGGTCTGCGATCCTTATATCAGGAAGTAA
TGGTTTGCGGCACCGATTGAACCACGGAGAGATAGCAATAATTCTCAGCTACAATGATTATCGAATTTAATACAG
CTATGGGCGAGGGTGAATGTCCAGAG
Length 851