CC1G_14946
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_14946 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | D6RP09 | Functional description | Protein kinase subdomain-containing protein PKL/ccin3 |
| Location | Chr_8:290875..291907 | Strand | - |
| Gene length (nt) | 1033 | Transcript length (nt) | 921 |
| CDS length (nt) | 921 | Protein length (aa) | 306 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Lentinula edodes B17 | Lened_B_1_1_7692 | 27.1 | 2.878E-6 | 47 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 12497 |
| Description | Protein kinase subdomain-containing protein PKL/ccin3 |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| No records | |||||
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| No records | |
GO
| Go id | Term | Ontology |
|---|---|---|
| No records | ||
KEGG
| KEGG Orthology |
|---|
| No records |
EggNOG
| COG category | Description |
|---|---|
| G | Protein kinase subdomain-containing protein PKL ccin3 |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| No records | ||
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_14946 across fungi.
Arrow shows the origin of gene family containing CC1G_14946.
Protein
| Sequence id | 12497 |
|---|---|
| Sequence |
>12497 MFSSLIIHDCGTIDGEPTSVTLRASPSFPCAVWFQQDWQQPVPATWVAKEISGFDGTLEVKLVERISEGRIGVAY IAQVLSATQQGTDIQATIPPTLCLKFAKPELSRSLARLGDAWFYEQMESLQGISVPTCFGFFASTAADLDKRANP HESNLDVSRARIKFEIEPWKRRKVLFEDTDRIPCNIDQYPSADWQSDDRGLMSSFTIREKYSKVNLEPRKAIKDV LDDLLELGVIHGNLSPWNVLKYMPPASAAGDERVCPRHNVVHPWGLIDFDRSQMLDLENLCKVDGRLVTRIDRMV MYATAF |
| Length | 306 |
Coding
| Sequence id | CC1G_14946T0 |
|---|---|
| Sequence |
>CC1G_14946T0 ATGTTCTCGAGCCTAATCATTCACGACTGCGGTACTATCGACGGAGAGCCCACATCAGTTACACTCAGAGCTTCA CCTTCTTTCCCCTGCGCAGTCTGGTTCCAGCAGGACTGGCAGCAGCCAGTGCCTGCCACATGGGTAGCAAAGGAA ATCTCTGGGTTCGACGGGACCCTCGAGGTTAAGCTCGTAGAGCGCATCTCTGAGGGTCGCATTGGTGTAGCTTAC ATTGCGCAGGTTCTCTCCGCAACTCAACAAGGCACAGATATTCAGGCGACAATACCACCCACCCTGTGCCTCAAA TTCGCCAAGCCCGAGCTCAGTCGCAGTCTGGCACGACTCGGAGATGCCTGGTTCTACGAGCAGATGGAGTCTCTG CAGGGTATTTCCGTGCCCACTTGCTTCGGTTTCTTCGCCTCCACTGCGGCAGACCTAGATAAACGGGCCAATCCA CACGAATCCAACCTCGACGTCAGCCGCGCCCGAATTAAGTTTGAAATCGAACCTTGGAAGCGCCGGAAGGTTTTG TTCGAAGACACGGACCGTATCCCTTGTAACATCGACCAGTATCCTTCAGCCGACTGGCAGTCCGATGACCGTGGG CTTATGTCTTCATTTACTATACGTGAGAAGTACTCAAAGGTTAATTTGGAACCTAGGAAAGCCATAAAGGATGTT CTAGACGATCTACTTGAACTCGGCGTCATTCACGGCAACCTCTCTCCTTGGAATGTATTGAAGTATATGCCTCCC GCGAGTGCTGCAGGTGATGAACGAGTATGCCCCCGACACAATGTCGTCCATCCCTGGGGATTGATTGACTTTGAC CGTTCGCAGATGCTCGATCTGGAAAATTTGTGCAAGGTTGACGGGCGTTTGGTTACTAGAATTGACAGGATGGTT ATGTATGCCACGGCGTTT |
| Length | 921 |
Transcript
| Sequence id | CC1G_14946T0 |
|---|---|
| Sequence |
>CC1G_14946T0 ATGTTCTCGAGCCTAATCATTCACGACTGCGGTACTATCGACGGAGAGCCCACATCAGTTACACTCAGAGCTTCA CCTTCTTTCCCCTGCGCAGTCTGGTTCCAGCAGGACTGGCAGCAGCCAGTGCCTGCCACATGGGTAGCAAAGGAA ATCTCTGGGTTCGACGGGACCCTCGAGGTTAAGCTCGTAGAGCGCATCTCTGAGGGTCGCATTGGTGTAGCTTAC ATTGCGCAGGTTCTCTCCGCAACTCAACAAGGCACAGATATTCAGGCGACAATACCACCCACCCTGTGCCTCAAA TTCGCCAAGCCCGAGCTCAGTCGCAGTCTGGCACGACTCGGAGATGCCTGGTTCTACGAGCAGATGGAGTCTCTG CAGGGTATTTCCGTGCCCACTTGCTTCGGTTTCTTCGCCTCCACTGCGGCAGACCTAGATAAACGGGCCAATCCA CACGAATCCAACCTCGACGTCAGCCGCGCCCGAATTAAGTTTGAAATCGAACCTTGGAAGCGCCGGAAGGTTTTG TTCGAAGACACGGACCGTATCCCTTGTAACATCGACCAGTATCCTTCAGCCGACTGGCAGTCCGATGACCGTGGG CTTATGTCTTCATTTACTATACGTGAGAAGTACTCAAAGGTTAATTTGGAACCTAGGAAAGCCATAAAGGATGTT CTAGACGATCTACTTGAACTCGGCGTCATTCACGGCAACCTCTCTCCTTGGAATGTATTGAAGTATATGCCTCCC GCGAGTGCTGCAGGTGATGAACGAGTATGCCCCCGACACAATGTCGTCCATCCCTGGGGATTGATTGACTTTGAC CGTTCGCAGATGCTCGATCTGGAAAATTTGTGCAAGGTTGACGGGCGTTTGGTTACTAGAATTGACAGGATGGTT ATGTATGCCACGGCGTTTTAG |
| Length | 921 |
Gene
| Sequence id | CC1G_14946T0 |
|---|---|
| Sequence |
>CC1G_14946T0 ATGTTCTCGAGCCTAATCATTCACGACTGCGGTACTATCGACGGAGAGCCCACATCAGTTACACTCAGAGCTTCA CCTTCTTTCCCCTGCGCAGTCTGGTTCCAGCAGGACTGGCAGCAGCCAGTGCCTGCCACATGGGTAGCAAAGGAA ATCTCTGGGTTCGACGGGACCCTCGAGGTTAAGCTCGTAGAGCGCATCTCTGAGGGTCGCATTGGTGTAGCTTAC ATTGCGCAGGTTCTCTCCGCAACTCAACAAGGCACAGATATTCAGGCGACAATACCACCCACCCTGTGCCTCAAA TTCGCCAAGCCCGAGCTCAGTCGCAGTCTGGCACGACTCGGAGATGCCTGGTTCTACGAGCAGATGGAGTCTCTG CAGGGTATTTCCGTGCCCACTTGCTTCGGTTTCTTCGCCTCCACTGCGGCAGACCTAGATAAACGGGCCAATCCA CACGAATCCAACCTCGACGTCAGCCGCGCCCGAATTAAGTTTGAAATCGAACCTTGGAAGCGCCGGAAGGTTTTG TTCGAAGACACGGACCGTATCCCTTGTAACATCGACCAGTATCCTTCAGCCGACTGGCAGTCCGATGACCGTGGT ACGAGTGGAAAAGGGATGTCCAGGATAATCCGACTTTCTCTGTGCTTGTTCTCGAGTTGCTTGGTGAGGCTTGCG ATGGATGGAGAACTAATTCTGATAAGTGAGTACAGGGCTTATGTCTTCATTTACTATACGTGAGAAGTACTCAAA GGTTAATTTGGAACCTAGGAAAGCCATAAAGGATGTTCTAGACGATCTACTTGAACTCGGCGTCATTCACGGCAA CCTCTCTCCTTGGAATGTATTGAAGTATATGCCTCCCGCGAGTGCTGCAGGTGATGAACGAGTATGCCCCCGACA CAATGTCGTCCATCCCTGGGGATTGATTGACTTTGACCGTTCGCAGATGCTCGATCTGGAAAATTTGTGCAAGGT TGACGGGCGTTTGGTTACTAGAATTGACAGGATGGTTATGTATGCCACGGCGTTTTAG |
| Length | 1033 |