CC1G_15413
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_15413 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | D6RQM8 | Functional description | Alcohol dehydrogenase |
| Location | Chr_12:762616..765041 | Strand | - |
| Gene length (nt) | 2426 | Transcript length (nt) | 1605 |
| CDS length (nt) | 1605 | Protein length (aa) | 534 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits |
|---|---|---|---|---|
| Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_217506 | 48.4 | 7.941E-176 | 559 |
| Pleurotus ostreatus PC15 | PleosPC15_2_1109867 | 48.7 | 5.251E-173 | 551 |
| Pleurotus ostreatus PC9 | PleosPC9_1_100509 | 50 | 2.512E-172 | 549 |
| Pleurotus eryngii ATCC 90797 | Pleery1_871357 | 48.9 | 1.593E-170 | 544 |
| Flammulina velutipes | Flave_chr07AA01044 | 45.5 | 2.685E-162 | 520 |
| Agrocybe aegerita | Agrae_CAA7257390 | 46.5 | 4.099E-158 | 508 |
| Lentinula edodes B17 | Lened_B_1_1_8257 | 45.4 | 8.556E-155 | 498 |
| Schizophyllum commune H4-8 | Schco3_2642607 | 45.2 | 3.136E-152 | 491 |
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 12964 |
| Description | Alcohol dehydrogenase |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 38 | 344 |
| Pfam | PF05199 | GMC oxidoreductase | IPR007867 | 443 | 502 |
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| SP(Sec/SPI) | 1 | 24 | 0.9753 |
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
InterPro
| Accession | Description |
|---|---|
| IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR012132 | Glucose-methanol-choline oxidoreductase |
| IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal |
GO
| Go id | Term | Ontology |
|---|---|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
| GO:0050660 | flavin adenine dinucleotide binding | MF |
KEGG
| KEGG Orthology |
|---|
| K00108 |
EggNOG
| COG category | Description |
|---|---|
| E | Aryl-alcohol oxidase |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| AA | AA3 | AA3_2 |
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_15413 across fungi.
Arrow shows the origin of gene family containing CC1G_15413.
Protein
| Sequence id | 12964 |
|---|---|
| Sequence |
>12964 MARNQSLLPSLLVLASFLFHPSLAVIRDDFTDLPRLAYDFVIVGGGTAGSVLASRLTEDPDFNVLLIEAGPSHEG VLESQVPGLTFALQQTQYDWNFNTVPQIGLNNRTDRLPRGRMLGGSSSINGLFYTRGSSDDYDRWAAITGDSGWS WSNILPYLLKVSPSLESESQPGLRLVRIEREMEPSDGRSRYHRKVFEASQELGGEFAYDVDMNDGTPLGFGWLQS TINNGERSSAATGYLDATVLARPNLHVLVNNRVVKLAERKQPGSNTPAFQTVHFQTGGSPSGRLHRVTAKKEVIL AAGAYGSPQLLMLSGIGDSTELQNIGIEPKVKLPSVGKNLTEHVQFSMMFSLGINDTVDPFLNQTFLMESMQEWF DHRTGYMTNLGINSVIWHRLPEDWPHWSQFEDPTGGINSPHIELVVMGGGIYPTPGPNLIVSPVLASPRSRGFMT LNSTSPYASPLIDPAMLTHPFDILALRESVRSVLKFVGASTWDEYNLTLLPPFAGLTTDEEIYETLRNVVTHVDA SIMVGFFPG |
| Length | 534 |
Coding
| Sequence id | CC1G_15413T0 |
|---|---|
| Sequence |
>CC1G_15413T0 ATGGCTCGGAATCAGTCGCTTCTTCCTTCTCTCCTCGTCCTTGCTTCTTTCCTCTTCCATCCGTCACTCGCGGTC ATTCGAGATGACTTCACCGACTTGCCACGGCTTGCTTACGACTTTGTGATCGTTGGAGGCGGAACCGCTGGCTCC GTCCTAGCAAGCAGGCTGACCGAGGACCCCGACTTCAATGTTTTGCTGATTGAAGCTGGGCCTTCGCACGAGGGT GTGCTCGAATCGCAGGTTCCCGGCTTAACTTTTGCTCTTCAGCAAACGCAATACGATTGGAACTTCAACACCGTT CCTCAGATTGGTCTGAATAACCGGACGGATCGGTTGCCCAGAGGTCGTATGCTAGGTGGAAGTAGCTCCATCAAC GGACTATTCTACACTCGTGGATCTTCGGATGACTATGACAGATGGGCAGCCATCACGGGCGACTCTGGTTGGTCT TGGAGCAACATCCTTCCCTATCTCCTGAAGGTCAGCCCATCCCTAGAGTCTGAGAGCCAGCCGGGGCTGAGATTG GTGCGAATAGAGCGAGAAATGGAACCCTCCGACGGACGGTCACGATACCACCGCAAGGTCTTCGAAGCTAGCCAG GAGCTTGGTGGGGAGTTTGCGTACGACGTCGACATGAACGACGGAACACCACTTGGTTTTGGTTGGCTTCAGTCC ACGATCAACAATGGGGAGAGAAGTAGTGCTGCCACTGGTTACCTCGATGCAACCGTTCTTGCTCGACCGAACCTT CACGTCCTGGTGAACAACCGCGTCGTCAAGTTGGCTGAAAGAAAGCAGCCTGGATCTAACACCCCAGCGTTCCAA ACTGTCCATTTTCAGACAGGAGGCAGTCCTTCAGGCAGGCTACACCGCGTAACTGCCAAGAAGGAAGTAATCCTG GCAGCGGGCGCCTATGGAAGCCCTCAACTGCTCATGTTATCCGGGATTGGTGATTCGACCGAGCTCCAGAACATC GGTATCGAGCCCAAAGTGAAACTTCCTAGCGTCGGCAAGAACCTCACTGAACACGTCCAATTCAGCATGATGTTC AGCTTGGGCATAAACGACACCGTCGACCCATTCCTGAACCAAACCTTCCTCATGGAAAGCATGCAGGAGTGGTTC GACCATCGTACCGGATATATGACGAACCTAGGTATCAATTCTGTTATCTGGCACAGACTCCCCGAAGACTGGCCT CACTGGAGTCAGTTTGAAGACCCTACGGGTGGTATTAATTCGCCGCATATTGAGTTGGTCGTGATGGGTGGTGGG ATTTACCCCACTCCTGGACCTAATCTCATTGTCAGCCCTGTCCTGGCGAGTCCTCGCTCTCGCGGCTTCATGACT CTCAACTCGACTAGCCCATACGCCAGTCCTCTCATCGACCCAGCGATGCTCACCCACCCCTTCGACATCCTAGCT CTGCGCGAGTCTGTCCGCTCTGTTTTGAAATTCGTCGGTGCCTCCACGTGGGACGAGTACAACCTTACGCTCCTT CCTCCGTTTGCGGGACTTACGACTGACGAAGAAATCTACGAGACCCTTCGCAACGTTGTTACCCATGTCGATGCT TCCATTATGGTGGGCTTCTTCCCTGGT |
| Length | 1605 |
Transcript
| Sequence id | CC1G_15413T0 |
|---|---|
| Sequence |
>CC1G_15413T0 ATGGCTCGGAATCAGTCGCTTCTTCCTTCTCTCCTCGTCCTTGCTTCTTTCCTCTTCCATCCGTCACTCGCGGTC ATTCGAGATGACTTCACCGACTTGCCACGGCTTGCTTACGACTTTGTGATCGTTGGAGGCGGAACCGCTGGCTCC GTCCTAGCAAGCAGGCTGACCGAGGACCCCGACTTCAATGTTTTGCTGATTGAAGCTGGGCCTTCGCACGAGGGT GTGCTCGAATCGCAGGTTCCCGGCTTAACTTTTGCTCTTCAGCAAACGCAATACGATTGGAACTTCAACACCGTT CCTCAGATTGGTCTGAATAACCGGACGGATCGGTTGCCCAGAGGTCGTATGCTAGGTGGAAGTAGCTCCATCAAC GGACTATTCTACACTCGTGGATCTTCGGATGACTATGACAGATGGGCAGCCATCACGGGCGACTCTGGTTGGTCT TGGAGCAACATCCTTCCCTATCTCCTGAAGGTCAGCCCATCCCTAGAGTCTGAGAGCCAGCCGGGGCTGAGATTG GTGCGAATAGAGCGAGAAATGGAACCCTCCGACGGACGGTCACGATACCACCGCAAGGTCTTCGAAGCTAGCCAG GAGCTTGGTGGGGAGTTTGCGTACGACGTCGACATGAACGACGGAACACCACTTGGTTTTGGTTGGCTTCAGTCC ACGATCAACAATGGGGAGAGAAGTAGTGCTGCCACTGGTTACCTCGATGCAACCGTTCTTGCTCGACCGAACCTT CACGTCCTGGTGAACAACCGCGTCGTCAAGTTGGCTGAAAGAAAGCAGCCTGGATCTAACACCCCAGCGTTCCAA ACTGTCCATTTTCAGACAGGAGGCAGTCCTTCAGGCAGGCTACACCGCGTAACTGCCAAGAAGGAAGTAATCCTG GCAGCGGGCGCCTATGGAAGCCCTCAACTGCTCATGTTATCCGGGATTGGTGATTCGACCGAGCTCCAGAACATC GGTATCGAGCCCAAAGTGAAACTTCCTAGCGTCGGCAAGAACCTCACTGAACACGTCCAATTCAGCATGATGTTC AGCTTGGGCATAAACGACACCGTCGACCCATTCCTGAACCAAACCTTCCTCATGGAAAGCATGCAGGAGTGGTTC GACCATCGTACCGGATATATGACGAACCTAGGTATCAATTCTGTTATCTGGCACAGACTCCCCGAAGACTGGCCT CACTGGAGTCAGTTTGAAGACCCTACGGGTGGTATTAATTCGCCGCATATTGAGTTGGTCGTGATGGGTGGTGGG ATTTACCCCACTCCTGGACCTAATCTCATTGTCAGCCCTGTCCTGGCGAGTCCTCGCTCTCGCGGCTTCATGACT CTCAACTCGACTAGCCCATACGCCAGTCCTCTCATCGACCCAGCGATGCTCACCCACCCCTTCGACATCCTAGCT CTGCGCGAGTCTGTCCGCTCTGTTTTGAAATTCGTCGGTGCCTCCACGTGGGACGAGTACAACCTTACGCTCCTT CCTCCGTTTGCGGGACTTACGACTGACGAAGAAATCTACGAGACCCTTCGCAACGTTGTTACCCATGTCGATGCT TCCATTATGGTGGGCTTCTTCCCTGGTTAA |
| Length | 1605 |
Gene
| Sequence id | CC1G_15413T0 |
|---|---|
| Sequence |
>CC1G_15413T0 ATGGCTCGGAATCAGTGCTTAAATACATGGCCGGTACCTCTAACCACCACTAATTTATAAACAGACTTTTCTGAA TGCTTGGTTTCAGGTCATGCTGATTCGCCTGCCGGTTTCGCACCTGTCACCCACTGATCTCCACGTGCGATTATA TACAATCCGAGCTTTTGCCAACTATATAACAGGAGGGGCCTACGGACGGAGTGTACTTAGAGGATCTTGGGAGGC CCCTTCATTGGCAGCCTTCTTCATATCTTCTTCTGCACAGCTACGGTACTATTACCCCGTCACGCCCGCATCTGA TGGGTACCAGGTCGCTTCTTCCTTCTCTCCTCGTCCTTGCTTCTTTCCTCTTCCATCCGTCACTCGCGGTCATTC GAGATGACTTCACCGACTTGCCACGGCTTGCTTACGACTTTGTGATCGTTGGAGGTACGTATTTCTACTTTACCT CATTGAAGGAACTCTCTTTCGGAATGCTGATAAACATCTCTAGGCGGAACCGCTGGCTCCGTCCTAGCAAGCAGG CTGACCGAGGACCCCGACTTCAATGTTTTGCTGATTGAAGCTGGGCCTTCGTAAGTCCTCTCAGTTGCGATCTAT CTTTCGTGGGCGCTGACGATGGCCATAGGCACGAGGGTGTGCTCGAATCGCAGGTTCCCGGCTTAACTTTTGCTC TTCAGCAAACGCAATACGATTGGAACTTCAACACCGTTCCTCAGATTGGTCTGAATAACCGGACGGATCGGTTGC CCAGAGGTCGTATGCTAGGTGGAAGTAGCTCCATCAGTACGCGCTGCCATTCCCTCTTGTGCATTCTTGGGCTCT GACCTGTCCTACACAGACGGACTATTCTACACTCGTGGATCTTCGGATGACTATGACAGATGGGCAGCCATCACG GGCGACTCTGGTTGGTCTTGGAGCAACATCCTTCCCTATCTCCTGAAGGTCAGCCCATCCCTAGAGTCTGAGAGC CAGCCGGGGCTGAGATTGGTGCGAATAGAGCGAGAAATGGAACCCTCCGACGGACGGTCACGATACCACCGGTAA GTATGATCCCAGCTACCATTCGACCACCGGAAAAGTCGGCGTCAGTCTGTCCGGTGTACCTCAAGCTTCGGATAG CAAGGTCTTCGAAGCTAGCCAGGAGCTTGGTGGGGAGTTTGCGTACGACGTCGACATGAACGACGGAACACCACT TGGTTTTGGTACGAATATTGCTTCCCTTTTTCTCGGGAGTGACATCTGAGAGATTTCGATTTAGGTTGGCTTCAG TCCACGATCAACAATGGGGAGAGAAGTAGTGCTGCCACTGGTTACCTCGATGCAACCGTTCTTGCTCGACCGAAC CTTCACGTCCTGGTGAACAACCGCGTCGTCAAGTTGGCTGAAAGAAAGCAGCCTGGATCTAACACCCCAGCGTTC CAAACTGTCCATTTTCAGACAGGAGGCAGTCCTTCAGGTAAGCACATCCTCCCTACTCAATGCCCAATTGAGTGT TAAACCGTCTTTCCACAGGCAGGCTACACCGCGTAACTGCCAAGAAGGAAGTAATCCTGGCAGCGGGCGCCTATG GAAGCCCTCAACTGCTCATGTTATCCGGGATTGGTGATTCGACCGAGCTCCAGAACATCGGTATCGAGCCCAAAG TGAAACTTCCTAGCGTCGGCAAGAACCTCACTGAACACGTCCAATTCAGCATGATGTTCAGCTTGGGCATAAACG ACACCGTCGACCCATTCCTGAACCAAACCTTCCTCATGGAAAGCATGCAGGAGTGGTTCGACCATCGTACCGGAT ATATGACGAACCTAGGTATCAATTCTGTTATCTGGCACAGACTCCCCGAAGACTGGCCTCACTGGAGTCAGTTTG AAGACCCTACGGGTGGTATTAATTCGCCGCATATTGAGTTGGTCGTGATGGGTGGTGGGATTTACCCCACTCCTG GACCTAATCTCATTGTCAGCCCTGTCCTGGCGAGTCCTCGCTCTCGTACGCCCCATTCAAGCATACTCAACGCTG AACCCATTCGCTGACCATTCACTCCTCTAGGCGGCTTCATGACTCTCAACTCGACTAGCCCATACGCCAGTCCTC TCATCGACCCAGCGATGCTCACCCACCCCTTCGACATCCTAGCTCTGCGCGAGTCTGTCCGCTCTGTTTTGAAAT TCGTCGGTGCCTCCACGTGGGACGAGTACAACCTTACGCTCCTTCCTCCGTTTGCGGGACTTACGACTGACGAAG AAATCTACGAGACCCTTCGCAACGTTGTTACCCATGGTGCGCATCCTGTCGGCACGGCAGCGATGTCTCATCCAG ACGCTTCGTATGGGGTTGTCGATCCTGATCTGAAGGTCAAGGGAGTTCAGGGCCTTCGTGTAGTCGATGCTTCCA TTATGGTGGGCTTCTTCCCTGGTTAA |
| Length | 2426 |